| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348630
Identifier: 29348630
GI number: 29348630
Start: 4113369
End: 4113731
Strand: Reverse
Name: 29348630
Synonym: BT_3221
Alternate gene names: NA
Gene position: 4113731-4113369 (Counterclockwise)
Preceding gene: 29348643
Following gene: 29348629
Centisome position: 65.71
GC content: 31.4
Gene sequence:
>363_bases ATGATGAAAAAACTACTATTTATTGCAATTATTGCAGTATTAGGATGCACAGCACTCCAAGCTAAAAATCGCATCAGAAT AAAAAGAGAGTCTTGGGAAGTAAAAGCAAGTACTAGAGTGCCAATATCTACCCCCCTTAATCTTTACTACGAAGGGAGTA CACTCTTTATTCATGCTAATATAGATTTAGAAAACATTATAATTGAAGTAAAGGATTCCTTCAACAAAACTATCTACCTA GACCTTACAAGTATTCAAGCTAACAATGAACATGTATTTACTCTGGAAAATATATCTTCCGGAGAATATATTATCGAAAT AAAATCCGGCGAAAACTATATTATCGGTTGTTTTATATTATAA
Upstream 100 bases:
>100_bases AAATGCCATTTGATCTAAAAACTGAATTATTTCTGAACTCATCCATACTAAACAATCAGACAATTAGCCTTTAATTTGCA AAAAAAATAAAAGAACGATC
Downstream 100 bases:
>100_bases GTCTTGATATATGTGTATATTTGCGCAAATAAAATCGCAATGATACATACATTCAAATGAAACAAAGACGAAAATTTATA CTATTCTATTTAAGCATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MMKKLLFIAIIAVLGCTALQAKNRIRIKRESWEVKASTRVPISTPLNLYYEGSTLFIHANIDLENIIIEVKDSFNKTIYL DLTSIQANNEHVFTLENISSGEYIIEIKSGENYIIGCFIL
Sequences:
>Translated_120_residues MMKKLLFIAIIAVLGCTALQAKNRIRIKRESWEVKASTRVPISTPLNLYYEGSTLFIHANIDLENIIIEVKDSFNKTIYL DLTSIQANNEHVFTLENISSGEYIIEIKSGENYIIGCFIL >Mature_120_residues MMKKLLFIAIIAVLGCTALQAKNRIRIKRESWEVKASTRVPISTPLNLYYEGSTLFIHANIDLENIIIEVKDSFNKTIYL DLTSIQANNEHVFTLENISSGEYIIEIKSGENYIIGCFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13654; Mature: 13654
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKLLFIAIIAVLGCTALQAKNRIRIKRESWEVKASTRVPISTPLNLYYEGSTLFIHAN CCHHHHHHHHHHHHCCCEECCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEEC IDLENIIIEVKDSFNKTIYLDLTSIQANNEHVFTLENISSGEYIIEIKSGENYIIGCFIL CCHHHEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEC >Mature Secondary Structure MMKKLLFIAIIAVLGCTALQAKNRIRIKRESWEVKASTRVPISTPLNLYYEGSTLFIHAN CCHHHHHHHHHHHHCCCEECCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEEC IDLENIIIEVKDSFNKTIYLDLTSIQANNEHVFTLENISSGEYIIEIKSGENYIIGCFIL CCHHHEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA