Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348643

Identifier: 29348643

GI number: 29348643

Start: 4124453

End: 4125643

Strand: Reverse

Name: 29348643

Synonym: BT_3234

Alternate gene names: NA

Gene position: 4125643-4124453 (Counterclockwise)

Preceding gene: 29348644

Following gene: 29348630

Centisome position: 65.9

GC content: 39.46

Gene sequence:

>1191_bases
ATGAAAATGATTCTTTTCCGACTAATATGTTTAAAGACATGCCTACTATTAATCCCTGTACTTTACGCACAAAACAACTA
TCGTCCGGGATTTATCATCACTGTTCAGAAAGACACAATATATGGAGAAATCGACTACCGTACAGATAAGATGAATGCTA
AACGCTGCGTCTTTCAATCACAAGGTAATGATACCGAACCAGTAACCTATCATCCTTTCGAAATCTTGGGATACCGTTTT
ACAGACGACGGTAAATACTATGTCTCCAAGAACATAGAATTGAAATACGGTGTCTCTACCCCCGTCTTTCTCGAATATTT
GCTACAAGGAATGAAAAGCTTGTACTACTATGAGACAGAAGATAACATACCAATCTATTTTGTTGAAGATAATAATACCC
TTGTAAAAATAGATGCGCCCAAACTGTCCAAGCAGGCTACCAATATACAGTTTAAAGGCCAGACTGACCGATATATTCCC
CTTCTTCATTACGCATTCAAAGACTGCCCAAGCCTGGCTCCCCAAATAGACCGGGCTCGTTTCAGCCGAAAGGAGATGAT
AAAAATCACAAAAGAATATCATTATGCAATGTGTACCAGTAATGAAGATTGCATTGAATTTGAAGCAAAAGAAGATAAAC
GTTCAATACAGTTAGATATAACTCCTTATGTAGGAGTTATTCAATATAATGTACCATCGGGTAGTCCGATCGGGCTCTAT
AGCTCACCCGAACTATCTTACCTGGCAGGAGTCACTTTAGCTATCAGCAATAGACGGTGGATGAGTTCGCTCAGTGGTTG
TTTTGATGTGTCTTTTTCCCGCATAACATCCTCTGCAAGATCATTGAATAATGAAAATTCATCCACTATATTTAAACATA
GCGGAACAATGTTTTCGGGTAAGTTAGGAATACGCTATACCTATCCGAAAGGAATGGCGCGACCATTTGTTGAGCTTGGA
GCAGACTTCAGTGGAATGATCAATGCCAAGATAAAGATAAATGATAAGAGCGAGAGATGGCTGGATGGTGTCTACCCTGG
CTATTACGCCAATGCGGGAGTAAACTTCAAACTTTCGCGGAAAAACAAACAAATGATATGCATACGCGCTCAATTCAAAG
GCTTAAGAGACATGATGGAAAAATCAGCCCTCGTTAATGGATGGTCAGGAGTGATAGGATATACATTTTAA

Upstream 100 bases:

>100_bases
TATCCTTTTCCATATAAAAAGCAATACAAAAGATGATGTTATTATTAAATTAATTCGTATCTTTCGGACACACAAAAAAG
TTAAACCAACAATCACACAT

Downstream 100 bases:

>100_bases
GTACTGCATTATTCGTTTATATAGTACTCACACTAGGAAATCTCTTATAAAACCGTTTTTCTTGTTATACCCATATTCTA
CCCGACAATAAAACTCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQSQGNDTEPVTYHPFEILGYRF
TDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETEDNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIP
LLHYAFKDCPSLAPQIDRARFSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY
SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSGKLGIRYTYPKGMARPFVELG
ADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSRKNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF

Sequences:

>Translated_396_residues
MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQSQGNDTEPVTYHPFEILGYRF
TDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETEDNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIP
LLHYAFKDCPSLAPQIDRARFSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY
SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSGKLGIRYTYPKGMARPFVELG
ADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSRKNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF
>Mature_396_residues
MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQSQGNDTEPVTYHPFEILGYRF
TDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETEDNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIP
LLHYAFKDCPSLAPQIDRARFSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY
SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSGKLGIRYTYPKGMARPFVELG
ADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSRKNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45362; Mature: 45362

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEEECCCCCHHEEEEC
QGNDTEPVTYHPFEILGYRFTDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETE
CCCCCCCEEECCCEEEEEEECCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHEEEECC
DNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIPLLHYAFKDCPSLAPQIDRAR
CCCEEEEEECCCEEEEEECCCCCCHHCCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHH
FSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY
HCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEECCC
SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSG
CCCCCHHHEEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEC
KLGIRYTYPKGMARPFVELGADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSR
CEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCEECCCEEEEECC
KNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF
CCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEEECCCCCHHEEEEC
QGNDTEPVTYHPFEILGYRFTDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETE
CCCCCCCEEECCCEEEEEEECCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHEEEECC
DNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIPLLHYAFKDCPSLAPQIDRAR
CCCEEEEEECCCEEEEEECCCCCCHHCCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHH
FSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY
HCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEECCC
SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSG
CCCCCHHHEEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEC
KLGIRYTYPKGMARPFVELGADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSR
CEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCEECCCEEEEECC
KNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF
CCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA