| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348643
Identifier: 29348643
GI number: 29348643
Start: 4124453
End: 4125643
Strand: Reverse
Name: 29348643
Synonym: BT_3234
Alternate gene names: NA
Gene position: 4125643-4124453 (Counterclockwise)
Preceding gene: 29348644
Following gene: 29348630
Centisome position: 65.9
GC content: 39.46
Gene sequence:
>1191_bases ATGAAAATGATTCTTTTCCGACTAATATGTTTAAAGACATGCCTACTATTAATCCCTGTACTTTACGCACAAAACAACTA TCGTCCGGGATTTATCATCACTGTTCAGAAAGACACAATATATGGAGAAATCGACTACCGTACAGATAAGATGAATGCTA AACGCTGCGTCTTTCAATCACAAGGTAATGATACCGAACCAGTAACCTATCATCCTTTCGAAATCTTGGGATACCGTTTT ACAGACGACGGTAAATACTATGTCTCCAAGAACATAGAATTGAAATACGGTGTCTCTACCCCCGTCTTTCTCGAATATTT GCTACAAGGAATGAAAAGCTTGTACTACTATGAGACAGAAGATAACATACCAATCTATTTTGTTGAAGATAATAATACCC TTGTAAAAATAGATGCGCCCAAACTGTCCAAGCAGGCTACCAATATACAGTTTAAAGGCCAGACTGACCGATATATTCCC CTTCTTCATTACGCATTCAAAGACTGCCCAAGCCTGGCTCCCCAAATAGACCGGGCTCGTTTCAGCCGAAAGGAGATGAT AAAAATCACAAAAGAATATCATTATGCAATGTGTACCAGTAATGAAGATTGCATTGAATTTGAAGCAAAAGAAGATAAAC GTTCAATACAGTTAGATATAACTCCTTATGTAGGAGTTATTCAATATAATGTACCATCGGGTAGTCCGATCGGGCTCTAT AGCTCACCCGAACTATCTTACCTGGCAGGAGTCACTTTAGCTATCAGCAATAGACGGTGGATGAGTTCGCTCAGTGGTTG TTTTGATGTGTCTTTTTCCCGCATAACATCCTCTGCAAGATCATTGAATAATGAAAATTCATCCACTATATTTAAACATA GCGGAACAATGTTTTCGGGTAAGTTAGGAATACGCTATACCTATCCGAAAGGAATGGCGCGACCATTTGTTGAGCTTGGA GCAGACTTCAGTGGAATGATCAATGCCAAGATAAAGATAAATGATAAGAGCGAGAGATGGCTGGATGGTGTCTACCCTGG CTATTACGCCAATGCGGGAGTAAACTTCAAACTTTCGCGGAAAAACAAACAAATGATATGCATACGCGCTCAATTCAAAG GCTTAAGAGACATGATGGAAAAATCAGCCCTCGTTAATGGATGGTCAGGAGTGATAGGATATACATTTTAA
Upstream 100 bases:
>100_bases TATCCTTTTCCATATAAAAAGCAATACAAAAGATGATGTTATTATTAAATTAATTCGTATCTTTCGGACACACAAAAAAG TTAAACCAACAATCACACAT
Downstream 100 bases:
>100_bases GTACTGCATTATTCGTTTATATAGTACTCACACTAGGAAATCTCTTATAAAACCGTTTTTCTTGTTATACCCATATTCTA CCCGACAATAAAACTCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQSQGNDTEPVTYHPFEILGYRF TDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETEDNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIP LLHYAFKDCPSLAPQIDRARFSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSGKLGIRYTYPKGMARPFVELG ADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSRKNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF
Sequences:
>Translated_396_residues MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQSQGNDTEPVTYHPFEILGYRF TDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETEDNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIP LLHYAFKDCPSLAPQIDRARFSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSGKLGIRYTYPKGMARPFVELG ADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSRKNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF >Mature_396_residues MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQSQGNDTEPVTYHPFEILGYRF TDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETEDNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIP LLHYAFKDCPSLAPQIDRARFSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSGKLGIRYTYPKGMARPFVELG ADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSRKNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45362; Mature: 45362
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEEECCCCCHHEEEEC QGNDTEPVTYHPFEILGYRFTDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETE CCCCCCCEEECCCEEEEEEECCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHEEEECC DNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIPLLHYAFKDCPSLAPQIDRAR CCCEEEEEECCCEEEEEECCCCCCHHCCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHH FSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY HCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEECCC SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSG CCCCCHHHEEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEC KLGIRYTYPKGMARPFVELGADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSR CEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCEECCCEEEEECC KNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF CCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MKMILFRLICLKTCLLLIPVLYAQNNYRPGFIITVQKDTIYGEIDYRTDKMNAKRCVFQS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEEECCCCCHHEEEEC QGNDTEPVTYHPFEILGYRFTDDGKYYVSKNIELKYGVSTPVFLEYLLQGMKSLYYYETE CCCCCCCEEECCCEEEEEEECCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHEEEECC DNIPIYFVEDNNTLVKIDAPKLSKQATNIQFKGQTDRYIPLLHYAFKDCPSLAPQIDRAR CCCEEEEEECCCEEEEEECCCCCCHHCCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHH FSRKEMIKITKEYHYAMCTSNEDCIEFEAKEDKRSIQLDITPYVGVIQYNVPSGSPIGLY HCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEECCC SSPELSYLAGVTLAISNRRWMSSLSGCFDVSFSRITSSARSLNNENSSTIFKHSGTMFSG CCCCCHHHEEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEC KLGIRYTYPKGMARPFVELGADFSGMINAKIKINDKSERWLDGVYPGYYANAGVNFKLSR CEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCEECCCEEEEECC KNKQMICIRAQFKGLRDMMEKSALVNGWSGVIGYTF CCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA