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The map label for this gene is 29348629

Identifier: 29348629

GI number: 29348629

Start: 4111576

End: 4113312

Strand: Reverse

Name: 29348629

Synonym: BT_3220

Alternate gene names: NA

Gene position: 4113312-4111576 (Counterclockwise)

Preceding gene: 29348630

Following gene: 29348627

Centisome position: 65.7

GC content: 34.02

Gene sequence:

>1737_bases
ATGAAACAAAGACGAAAATTTATACTATTCTATTTAAGCATTATATGCCTATTCTCATGCACTGCCCCATACCCCAACAC
AATACTGCGGGTGGAAAATATTATTAAAGAATATCCAGATAGTGCATTAACCATTTTAGACTCTCTGAGTGAGAGTATCA
CAAAGGAATCACAATCAGCAAGAATGTACTATTACCTGCTGTTAACAGAGGCACGTGACAGATGTTACGTGCCTCATACG
TCTGATTCTCTAATGTTATCCGTCACTGATTATTATGAAAGAGAAAATGATAAGGACAAACTGATAAAATCCTATTATTA
CACAGGCAGAGTATACCTTGATCTTCATGAAGGTCCTACAGCACTTTCTTATTTCCACAAAGCTTTTGATATCTCTACAG
ATAGCAAGAACTACGCTTTATTGGGGCGAATATACAGCCAAATGGGAACTCTATTTGCCTATGAAGGTCTCACAGAGGAA
GTACTACAAGCTTATCGAAACGCTTATCACTACTTACAACTAGGCAAAGACAGTCTTACTAGCGCTTATGCACTACGAGA
TTTAGGAAGAGCATTCAATTTACTTGAGATAACAGACAGCACAATCTATTATTATAACAAAGCATACCAATTAGCTAATA
GCAATGGAGACATACAAAGGGAAGTAAATATTCTCGAAGAATTGGCAGGCATCTATATTCAAATGGGAAAATATGACGAA
GCATTGAAAACGCTACAAGAAACAAATAGTAAATGGCAAGATGAGAAAGATATAAATTATGATGTTTGGGGAAATTTCTA
TGTAAGTATAGGACAAAAAGATTCAGCAGCCTATTACTTCAAGAAAAATATAGGACATAATAATGTATATTCAGACATAG
GAGCCTATCGGAATTTATATGAAATAGAAAAAGAACGTGGCAACTATGAAGAAGGATTAGCATATCTGGAGAAATATACA
GAATGTTCTGATAGCATTTACGACATATCCAACACAGAATCTTTGCGAAAAATAAAGGCTTTGTATGATTACCAACATAT
TGAGAAAGAAAAAGAATATTTGCGCAAGAAAAATGCAGAACAACGAGCATGGATCATCTTTATTGTTATTGCCATCGTTT
TAGGAGTTATCATCCTTATTCGATATAATAGAAACAGGAAAGCTATGATTCGGGAACAAGAGAAAAAACTTCATGAGATT
AACGAACAACAATATCGGAAAAGCCAACTATATATAGAAGAAAACAAGAAAAAAATTGAAGAATTAAAAGAAAAGGTAAA
ATCGTTCGAACAGGAAAACAATGATTTACAACAAAAACTTTTACTTGCAAAAAAGGAAAAGCTAGAACAAACCAATCAAG
CTATCGAAACATCACAAAGAGAACAAGCATTACTTGAGGAAGCGCTTAGAAGGTCTGATATTTATGCTTATTGTTATCGT
GCGATAGAAGATTCCTCGATCAGACTCACCGAAACAGAATGGAAAGAACTAGAAAATATCATTAATGATACATATGACAA
TTTCACCAACAAGTTATTCATACTGCATCCCTCTATTACCAAGATGGAACTACGTATTTGTTTACTGTTAAAAATTAAAA
TTCCAGTTTCTACAATTTCACAATTGGTATGTCGTACACAAAGCGCTGTATCTATGAGCAGAAAACAGCTTTATAAGAAG
ATATTCAATAAAGAAGGGACACCCGCAAACCTAGATGACTTCATTGTCTCTTTTTAA

Upstream 100 bases:

>100_bases
TAAAATCCGGCGAAAACTATATTATCGGTTGTTTTATATTATAAGTCTTGATATATGTGTATATTTGCGCAAATAAAATC
GCAATGATACATACATTCAA

Downstream 100 bases:

>100_bases
AAAGATGAACTAAATCTCTGATATTCCACACAAAGAAGAAATACCCGCATTCAGAATCTTCAGTTTCACCCGCAAACGCC
CTGTCGGAAGGGGATAGCGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Lipoprotein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat; TPR-Domain-Containing Protein; Transmembrane Protein; TPR Domain-Containing Protein; Regulatory Protein Luxr

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MKQRRKFILFYLSIICLFSCTAPYPNTILRVENIIKEYPDSALTILDSLSESITKESQSARMYYYLLLTEARDRCYVPHT
SDSLMLSVTDYYERENDKDKLIKSYYYTGRVYLDLHEGPTALSYFHKAFDISTDSKNYALLGRIYSQMGTLFAYEGLTEE
VLQAYRNAYHYLQLGKDSLTSAYALRDLGRAFNLLEITDSTIYYYNKAYQLANSNGDIQREVNILEELAGIYIQMGKYDE
ALKTLQETNSKWQDEKDINYDVWGNFYVSIGQKDSAAYYFKKNIGHNNVYSDIGAYRNLYEIEKERGNYEEGLAYLEKYT
ECSDSIYDISNTESLRKIKALYDYQHIEKEKEYLRKKNAEQRAWIIFIVIAIVLGVIILIRYNRNRKAMIREQEKKLHEI
NEQQYRKSQLYIEENKKKIEELKEKVKSFEQENNDLQQKLLLAKKEKLEQTNQAIETSQREQALLEEALRRSDIYAYCYR
AIEDSSIRLTETEWKELENIINDTYDNFTNKLFILHPSITKMELRICLLLKIKIPVSTISQLVCRTQSAVSMSRKQLYKK
IFNKEGTPANLDDFIVSF

Sequences:

>Translated_578_residues
MKQRRKFILFYLSIICLFSCTAPYPNTILRVENIIKEYPDSALTILDSLSESITKESQSARMYYYLLLTEARDRCYVPHT
SDSLMLSVTDYYERENDKDKLIKSYYYTGRVYLDLHEGPTALSYFHKAFDISTDSKNYALLGRIYSQMGTLFAYEGLTEE
VLQAYRNAYHYLQLGKDSLTSAYALRDLGRAFNLLEITDSTIYYYNKAYQLANSNGDIQREVNILEELAGIYIQMGKYDE
ALKTLQETNSKWQDEKDINYDVWGNFYVSIGQKDSAAYYFKKNIGHNNVYSDIGAYRNLYEIEKERGNYEEGLAYLEKYT
ECSDSIYDISNTESLRKIKALYDYQHIEKEKEYLRKKNAEQRAWIIFIVIAIVLGVIILIRYNRNRKAMIREQEKKLHEI
NEQQYRKSQLYIEENKKKIEELKEKVKSFEQENNDLQQKLLLAKKEKLEQTNQAIETSQREQALLEEALRRSDIYAYCYR
AIEDSSIRLTETEWKELENIINDTYDNFTNKLFILHPSITKMELRICLLLKIKIPVSTISQLVCRTQSAVSMSRKQLYKK
IFNKEGTPANLDDFIVSF
>Mature_578_residues
MKQRRKFILFYLSIICLFSCTAPYPNTILRVENIIKEYPDSALTILDSLSESITKESQSARMYYYLLLTEARDRCYVPHT
SDSLMLSVTDYYERENDKDKLIKSYYYTGRVYLDLHEGPTALSYFHKAFDISTDSKNYALLGRIYSQMGTLFAYEGLTEE
VLQAYRNAYHYLQLGKDSLTSAYALRDLGRAFNLLEITDSTIYYYNKAYQLANSNGDIQREVNILEELAGIYIQMGKYDE
ALKTLQETNSKWQDEKDINYDVWGNFYVSIGQKDSAAYYFKKNIGHNNVYSDIGAYRNLYEIEKERGNYEEGLAYLEKYT
ECSDSIYDISNTESLRKIKALYDYQHIEKEKEYLRKKNAEQRAWIIFIVIAIVLGVIILIRYNRNRKAMIREQEKKLHEI
NEQQYRKSQLYIEENKKKIEELKEKVKSFEQENNDLQQKLLLAKKEKLEQTNQAIETSQREQALLEEALRRSDIYAYCYR
AIEDSSIRLTETEWKELENIINDTYDNFTNKLFILHPSITKMELRICLLLKIKIPVSTISQLVCRTQSAVSMSRKQLYKK
IFNKEGTPANLDDFIVSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68176; Mature: 68176

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRRKFILFYLSIICLFSCTAPYPNTILRVENIIKEYPDSALTILDSLSESITKESQSA
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
RMYYYLLLTEARDRCYVPHTSDSLMLSVTDYYERENDKDKLIKSYYYTGRVYLDLHEGPT
EEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHEEECEEEEEECCCCH
ALSYFHKAFDISTDSKNYALLGRIYSQMGTLFAYEGLTEEVLQAYRNAYHYLQLGKDSLT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
SAYALRDLGRAFNLLEITDSTIYYYNKAYQLANSNGDIQREVNILEELAGIYIQMGKYDE
HHHHHHHHHHHCCEEEEECCEEEEEHHHHEECCCCCCHHHHHHHHHHHHHHHEECCCHHH
ALKTLQETNSKWQDEKDINYDVWGNFYVSIGQKDSAAYYFKKNIGHNNVYSDIGAYRNLY
HHHHHHHHCCCCCCCCCCCEEECCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHH
EIEKERGNYEEGLAYLEKYTECSDSIYDISNTESLRKIKALYDYQHIEKEKEYLRKKNAE
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QRAWIIFIVIAIVLGVIILIRYNRNRKAMIREQEKKLHEINEQQYRKSQLYIEENKKKIE
HHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELKEKVKSFEQENNDLQQKLLLAKKEKLEQTNQAIETSQREQALLEEALRRSDIYAYCYR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIEDSSIRLTETEWKELENIINDTYDNFTNKLFILHPSITKMELRICLLLKIKIPVSTIS
HHCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHEEEEEEEEECCHHHHH
QLVCRTQSAVSMSRKQLYKKIFNKEGTPANLDDFIVSF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKQRRKFILFYLSIICLFSCTAPYPNTILRVENIIKEYPDSALTILDSLSESITKESQSA
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
RMYYYLLLTEARDRCYVPHTSDSLMLSVTDYYERENDKDKLIKSYYYTGRVYLDLHEGPT
EEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHEEECEEEEEECCCCH
ALSYFHKAFDISTDSKNYALLGRIYSQMGTLFAYEGLTEEVLQAYRNAYHYLQLGKDSLT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
SAYALRDLGRAFNLLEITDSTIYYYNKAYQLANSNGDIQREVNILEELAGIYIQMGKYDE
HHHHHHHHHHHCCEEEEECCEEEEEHHHHEECCCCCCHHHHHHHHHHHHHHHEECCCHHH
ALKTLQETNSKWQDEKDINYDVWGNFYVSIGQKDSAAYYFKKNIGHNNVYSDIGAYRNLY
HHHHHHHHCCCCCCCCCCCEEECCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHH
EIEKERGNYEEGLAYLEKYTECSDSIYDISNTESLRKIKALYDYQHIEKEKEYLRKKNAE
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QRAWIIFIVIAIVLGVIILIRYNRNRKAMIREQEKKLHEINEQQYRKSQLYIEENKKKIE
HHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELKEKVKSFEQENNDLQQKLLLAKKEKLEQTNQAIETSQREQALLEEALRRSDIYAYCYR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIEDSSIRLTETEWKELENIINDTYDNFTNKLFILHPSITKMELRICLLLKIKIPVSTIS
HHCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHEEEEEEEEECCHHHHH
QLVCRTQSAVSMSRKQLYKKIFNKEGTPANLDDFIVSF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA