| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348541
Identifier: 29348541
GI number: 29348541
Start: 3994022
End: 3995968
Strand: Reverse
Name: 29348541
Synonym: BT_3132
Alternate gene names: NA
Gene position: 3995968-3994022 (Counterclockwise)
Preceding gene: 29348542
Following gene: 29348540
Centisome position: 63.83
GC content: 48.79
Gene sequence:
>1947_bases ATGAAAAAATATCAATTAACACTCTTATCGTTATGTGTGGCAGCCTTTGCGCAAGCGAAGGTCACATTGCCGTCATTCTT TACCGATAATATGGTTATTCAGCAAAACAGTCAGCTGACGTTGCCGGGAAAAGCAAAAGCCGGTAAACAAGTGACTGTGA AGGTGAGCTGGAATCATGAGAAATATACGGCTAAAGCGTCAGCTGATGGTCATTTTAGCATAGAAGTCCCGACTCCGCCT GCCGGAGGACCTTATCAGATCATTGTTTCGGATGGTGAGAAACTAGTGTTGAACAACGTCTTATCGGGCGAAGTCTGGAT ATGTTCCGGTCAGTCGAATATGGAAATGCCCGTTGCCGGATGGGGAAAAGTGATGAATTACGAACAGGAGGTTGCCGATG CCGATTATCCTTCCATCCGTCTGTTGCAGGTAAAGAAGACCGTCGCTTTCTCTCCGCAGGATAACGTAGAAATGAATATG AACGGCTGGCAGGAATGTAGTTCCGCTACTGTACCGGAGTTTTCTTCCGTTGCTTATTTCTATGCCCGTAAGTTGTGGAA AGAACTGAATGTGCCCGTTGGGGTGATTGACTGCACTTGGGGCGGCACACCTGCCGAATCATGGACAAGCCATCAGACAT TGAAGCAAGTCGTGGGATTTCAGAAAAAGATGGCCGAAATGGAAAGCGCAGGCTTCCAAAGAGAGAAACTTGTCGAACTT TACCATCGGGAAATGGACGAGTGGCTTCAGCAGTTTGATGCCAAGGATGCCGGATTCAAAGACGGAGTTCCCCAATGGAT ATCAGCTCTTCAGACAGGGAATGAATGGAAACCGATGGAACTGCCCGCTTATTGGGAAACTCGCGGACTGAATTTTGACG GCACTGTCTGGTTCCAGAAAGAAGTGGAAATACCTGCTGACTGGAACGGCAAGGAAATCTCCTTCCATCTGGCTATGATC GACGACGACGATGTTACTTACTTTAACGGGAAGGAGATAGGAAGAACTTCGGGATGCAATACGATGCGTACTTATAAGAT TCCCGCAGCCTTGGCAAAGGCAGGCAAAGGGGTTATCACCATCCGTGCCATAGATTATGGCGGCGAAGGCGGTATCCACG GAGAACCTCAGCAGATGTATATGGAAGCGAACGACAAGAAGATTTCCTTGGCGGGCAACTGGAACTATCACACCGGAGTA TCGATGACCGGTGCACCTTCTAGACCATTGTCTCCCGAAGGAACCGGCTGGCCGACATCCTGCTATCCGACCGTACTTTA CAATGCAATGATACATCCTTTTACCGTCTTCCCTATCAAGGGCGCTATCTGGTATCAGGGAGAAAATAATGTAGGATTCG ACGAGCAGTACAGAGTACTTTTCCAATCAATGATTACAGATTGGAGAAGGGCATGGAAACAGGATTTTCCTTTCTACTTT GTGCAGTTGGCCAATTATCTGAAGCCGGAAGAAGTACAGCCGGACTCCAAATGGGCGGCTCTCCGTGATGCACAGGCACA TGCGCTGCACCTACCTAATACAGGTATGGCATGTGCCATCGACCTCGGCGAAGCTTATGATATCCACCCGAAAAACAAAC AGGAAGTAGGAAAGCGACTGGCGCAAGCGGCATTGGCGAAGACCTATAACAAAGGTACATACGAAGTGCCCGCATTCCTT GGATACCGCATTTCGGGACGTACGCTGATTCTTAGTTTCGATCAGGAAGTAGTAGCCAAAGAAGGTACTCCGAAAGGCTT TATACTGGCAGGACCGGACGGGAAATACGTTCCGGCACAGGCTATTATCCGGGGAAAAGAAGTCATTCTGCAATCCGACC GGATAGAAATACCGACGGCGGCCTGCTATGCGTGGGCAGACAATCCTGTTTGTAATCTATATGGCAAGAACGGGCTTCCC GTACCCCCGTTCCGCACCAGAGAATAA
Upstream 100 bases:
>100_bases AAGAGTTGTGGAGCGGCAATGAGACTTTTGCCACAGGACAGCTTGAAGTGACCGTACCCTCCAAAGACGTGCAATTACTT GAATTTAAATAACCGAAGAA
Downstream 100 bases:
>100_bases ATATCAACCATAACAATGTAAACCATGAAATTAAAAGCATTCTTACTTTTTTTTCTATTGAGTTCTTTTTCTCTTTTGCA GGCTGCCGACAAGCCGCTGA
Product: sialic acid-specific 9-O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialate O-Acetylesterase Homolog; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase; Alpha-L-Fucosidase
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MKKYQLTLLSLCVAAFAQAKVTLPSFFTDNMVIQQNSQLTLPGKAKAGKQVTVKVSWNHEKYTAKASADGHFSIEVPTPP AGGPYQIIVSDGEKLVLNNVLSGEVWICSGQSNMEMPVAGWGKVMNYEQEVADADYPSIRLLQVKKTVAFSPQDNVEMNM NGWQECSSATVPEFSSVAYFYARKLWKELNVPVGVIDCTWGGTPAESWTSHQTLKQVVGFQKKMAEMESAGFQREKLVEL YHREMDEWLQQFDAKDAGFKDGVPQWISALQTGNEWKPMELPAYWETRGLNFDGTVWFQKEVEIPADWNGKEISFHLAMI DDDDVTYFNGKEIGRTSGCNTMRTYKIPAALAKAGKGVITIRAIDYGGEGGIHGEPQQMYMEANDKKISLAGNWNYHTGV SMTGAPSRPLSPEGTGWPTSCYPTVLYNAMIHPFTVFPIKGAIWYQGENNVGFDEQYRVLFQSMITDWRRAWKQDFPFYF VQLANYLKPEEVQPDSKWAALRDAQAHALHLPNTGMACAIDLGEAYDIHPKNKQEVGKRLAQAALAKTYNKGTYEVPAFL GYRISGRTLILSFDQEVVAKEGTPKGFILAGPDGKYVPAQAIIRGKEVILQSDRIEIPTAACYAWADNPVCNLYGKNGLP VPPFRTRE
Sequences:
>Translated_648_residues MKKYQLTLLSLCVAAFAQAKVTLPSFFTDNMVIQQNSQLTLPGKAKAGKQVTVKVSWNHEKYTAKASADGHFSIEVPTPP AGGPYQIIVSDGEKLVLNNVLSGEVWICSGQSNMEMPVAGWGKVMNYEQEVADADYPSIRLLQVKKTVAFSPQDNVEMNM NGWQECSSATVPEFSSVAYFYARKLWKELNVPVGVIDCTWGGTPAESWTSHQTLKQVVGFQKKMAEMESAGFQREKLVEL YHREMDEWLQQFDAKDAGFKDGVPQWISALQTGNEWKPMELPAYWETRGLNFDGTVWFQKEVEIPADWNGKEISFHLAMI DDDDVTYFNGKEIGRTSGCNTMRTYKIPAALAKAGKGVITIRAIDYGGEGGIHGEPQQMYMEANDKKISLAGNWNYHTGV SMTGAPSRPLSPEGTGWPTSCYPTVLYNAMIHPFTVFPIKGAIWYQGENNVGFDEQYRVLFQSMITDWRRAWKQDFPFYF VQLANYLKPEEVQPDSKWAALRDAQAHALHLPNTGMACAIDLGEAYDIHPKNKQEVGKRLAQAALAKTYNKGTYEVPAFL GYRISGRTLILSFDQEVVAKEGTPKGFILAGPDGKYVPAQAIIRGKEVILQSDRIEIPTAACYAWADNPVCNLYGKNGLP VPPFRTRE >Mature_648_residues MKKYQLTLLSLCVAAFAQAKVTLPSFFTDNMVIQQNSQLTLPGKAKAGKQVTVKVSWNHEKYTAKASADGHFSIEVPTPP AGGPYQIIVSDGEKLVLNNVLSGEVWICSGQSNMEMPVAGWGKVMNYEQEVADADYPSIRLLQVKKTVAFSPQDNVEMNM NGWQECSSATVPEFSSVAYFYARKLWKELNVPVGVIDCTWGGTPAESWTSHQTLKQVVGFQKKMAEMESAGFQREKLVEL YHREMDEWLQQFDAKDAGFKDGVPQWISALQTGNEWKPMELPAYWETRGLNFDGTVWFQKEVEIPADWNGKEISFHLAMI DDDDVTYFNGKEIGRTSGCNTMRTYKIPAALAKAGKGVITIRAIDYGGEGGIHGEPQQMYMEANDKKISLAGNWNYHTGV SMTGAPSRPLSPEGTGWPTSCYPTVLYNAMIHPFTVFPIKGAIWYQGENNVGFDEQYRVLFQSMITDWRRAWKQDFPFYF VQLANYLKPEEVQPDSKWAALRDAQAHALHLPNTGMACAIDLGEAYDIHPKNKQEVGKRLAQAALAKTYNKGTYEVPAFL GYRISGRTLILSFDQEVVAKEGTPKGFILAGPDGKYVPAQAIIRGKEVILQSDRIEIPTAACYAWADNPVCNLYGKNGLP VPPFRTRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=209, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72373; Mature: 72373
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYQLTLLSLCVAAFAQAKVTLPSFFTDNMVIQQNSQLTLPGKAKAGKQVTVKVSWNHE CCCCHHHHHHHHHHHHHHCEEECCCCCCCCEEEECCCEEECCCCCCCCCEEEEEEEECCC KYTAKASADGHFSIEVPTPPAGGPYQIIVSDGEKLVLNNVLSGEVWICSGQSNMEMPVAG EEEEECCCCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCCCCCCC WGKVMNYEQEVADADYPSIRLLQVKKTVAFSPQDNVEMNMNGWQECSSATVPEFSSVAYF HHHHHCCHHHHCCCCCCCEEEEEEEEEEEECCCCCEEECCCCHHHHCCCCCCCHHHHHHH YARKLWKELNVPVGVIDCTWGGTPAESWTSHQTLKQVVGFQKKMAEMESAGFQREKLVEL HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH YHREMDEWLQQFDAKDAGFKDGVPQWISALQTGNEWKPMELPAYWETRGLNFDGTVWFQK HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEEEE EVEIPADWNGKEISFHLAMIDDDDVTYFNGKEIGRTSGCNTMRTYKIPAALAKAGKGVIT EECCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHCCCCEEE IRAIDYGGEGGIHGEPQQMYMEANDKKISLAGNWNYHTGVSMTGAPSRPLSPEGTGWPTS EEEEEECCCCCCCCCHHHHEEECCCCEEEEEECCCEECCCEECCCCCCCCCCCCCCCCCC CYPTVLYNAMIHPFTVFPIKGAIWYQGENNVGFDEQYRVLFQSMITDWRRAWKQDFPFYF CHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH VQLANYLKPEEVQPDSKWAALRDAQAHALHLPNTGMACAIDLGEAYDIHPKNKQEVGKRL HHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCCEEEEECCCCEECCCCCHHHHHHHH AQAALAKTYNKGTYEVPAFLGYRISGRTLILSFDQEVVAKEGTPKGFILAGPDGKYVPAQ HHHHHHHHHCCCCEECCCEEEEEECCCEEEEECCHHHHHCCCCCCEEEEECCCCCCCCHH AIIRGKEVILQSDRIEIPTAACYAWADNPVCNLYGKNGLPVPPFRTRE HHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKKYQLTLLSLCVAAFAQAKVTLPSFFTDNMVIQQNSQLTLPGKAKAGKQVTVKVSWNHE CCCCHHHHHHHHHHHHHHCEEECCCCCCCCEEEECCCEEECCCCCCCCCEEEEEEEECCC KYTAKASADGHFSIEVPTPPAGGPYQIIVSDGEKLVLNNVLSGEVWICSGQSNMEMPVAG EEEEECCCCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCCCCCCC WGKVMNYEQEVADADYPSIRLLQVKKTVAFSPQDNVEMNMNGWQECSSATVPEFSSVAYF HHHHHCCHHHHCCCCCCCEEEEEEEEEEEECCCCCEEECCCCHHHHCCCCCCCHHHHHHH YARKLWKELNVPVGVIDCTWGGTPAESWTSHQTLKQVVGFQKKMAEMESAGFQREKLVEL HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH YHREMDEWLQQFDAKDAGFKDGVPQWISALQTGNEWKPMELPAYWETRGLNFDGTVWFQK HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEEEE EVEIPADWNGKEISFHLAMIDDDDVTYFNGKEIGRTSGCNTMRTYKIPAALAKAGKGVIT EECCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHCCCCEEE IRAIDYGGEGGIHGEPQQMYMEANDKKISLAGNWNYHTGVSMTGAPSRPLSPEGTGWPTS EEEEEECCCCCCCCCHHHHEEECCCCEEEEEECCCEECCCEECCCCCCCCCCCCCCCCCC CYPTVLYNAMIHPFTVFPIKGAIWYQGENNVGFDEQYRVLFQSMITDWRRAWKQDFPFYF CHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH VQLANYLKPEEVQPDSKWAALRDAQAHALHLPNTGMACAIDLGEAYDIHPKNKQEVGKRL HHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCCEEEEECCCCEECCCCCHHHHHHHH AQAALAKTYNKGTYEVPAFLGYRISGRTLILSFDQEVVAKEGTPKGFILAGPDGKYVPAQ HHHHHHHHHCCCCEECCCEEEEEECCCEEEEECCHHHHHCCCCCCEEEEECCCCCCCCHH AIIRGKEVILQSDRIEIPTAACYAWADNPVCNLYGKNGLPVPPFRTRE HHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA