Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348542

Identifier: 29348542

GI number: 29348542

Start: 3995977

End: 3997950

Strand: Reverse

Name: 29348542

Synonym: BT_3133

Alternate gene names: NA

Gene position: 3997950-3995977 (Counterclockwise)

Preceding gene: 29348543

Following gene: 29348541

Centisome position: 63.86

GC content: 44.83

Gene sequence:

>1974_bases
ATGCTTCTTCTGTTTCTTTTCATTTCCAACTGTGCCAGTGGAGACAAGATTTTCTCTACCGATGTATGGAATATAACTTA
CGATGATCAGCAAGGGGGAATAGCACTCACTTATAAGTCAAAAAATATTTGTAACGGAATGTATGCTTCCTATCAATGGG
AAGGGAAGGAGATCAAGACAAGTGACTATGCCCGCCATAAAATCAGTACGGGCAAAGTTTCCGATTCTTTCGGGAAAGGA
CATATATATAAGGTGGAGTATACGGATAAGGAGCTTCCGAAGCTGACTCAGTATTTCTATCTTTATCCGGGTAAGGAATA
TATACTGACCGATTTTACGGTCGAAGCGAAAGAGGAAATCCGTTCCGGCAGAATGGCTCCTGTTAATGTCGATTCTATAT
CCGGATTCTTGCAGGCAGGTGATAACCGTGCTCTTTTTGTTCCGTTCGACAATGACAAATGGATCAGATATCAGTCTCAC
CCGCTTGGTTTCGATACATTGGTGAGTTATGAAGTGACAGCCATATTCAATAATGAAAGCCGGAACGGTCTGGTGATCGG
CTCCGTAGAACATGATAACTGGAAAACAGGTATTTCAATAGGTAAGGGGGATCGTGATAACATTGGTTCGCTGGTATGTT
ATGGGGGCATAGCAGATGAGCAGACTCGTGACGTAAAGGCTCACGGTGCATTAGCAGGTAAAAAGATTAAATCCCCTAAA
GTCTTTTTGGGTTTCTTTGAAGATTGGTGCGATGGACTTGAAGCGTATGCAAAAGCCAACGCTGTAATTGCCCCTCCCAA
AGCATGGGAGAAAGCTGTTCCATTTGGTTGGAACAGCTGGGGGGCATTACAATTCAATCTGACTTATGAGAAAGCGATGG
AAGTCTCCGATTATTTCAAGGAGAATCTGCAGAATAATCATTTTGTAAACCCTGATCAGACTGTCTATATCGGTCTGGAT
TCCGGTTGGGACTGTATGAATGAGGAGCAACTGAAGTCATTTATCGAAAAATGTAAGTCGAACGGACAGATCGGTGGTAT
CTACTGGACTCCGTTCACCGACTGGGCACGCGATCCGGAACGGACGGTAGATGCCGCACCGGAATATAAATACAAAGATA
TCTATCTCTATGCCAACGGAAAGCCGCAGGAACTGGACGGCGCTTATGCAGTCGATCCAACGCATCCGGCAGTGGAAGCT
ATGATGAAGAAGACTTCCGGTTTGTTCCACCGTGCAGGATTCGAGTATGTGAAGATGGACTTCATGACACACGGTGCGAT
GGAAGCGGACAAATGGTATAATCCTGAGATTACCACAGGTATACAGGGATATAATTATGGCATGAAACTGCTCAATCAAT
ATTTTGGAGATATGTATATCAATCTCTCCATTTCTCCTGTCTTCCCTGCCCAGTATGCGCAGTCACGCAGAATAGCCTGT
GATGCGTGGAATCAGATCAAGGATACCGAATATACATTGAACGCTCTTTCATACGGCTGGTGGCAGAAGTATATCTATCA
ATATAACGATGCCGATCATATTGTACTGAGAGATGCTACCGACGGAGAAAACCGTGCCCGTATTACTTCGGGTGTCATTA
CGGGTATTTACATTACAGGAGACGATTTCAGTGCGGGAGGAGGAAAAGACGCCAAAGAAAAGTCACAGAAATATCTGACC
AATGCGGCAGTGAATGCAGTAGCGACAGGAGAAGTGTTCCGTCCCGTGGAAGGAAACGGAGAGAAGTCGGAACATATCTT
TGTAAGGAAGACACCCGATGGTCGTTTCCATTGTGCGGTATTCAACTACTCGGACCAGGAACAGACAACTGTGCTTTCGT
TAGAAAGAATAGGATTGGACAAGGCACGCGGCTATCAGGTGAAAGAGTTGTGGAGCGGCAATGAGACTTTTGCCACAGGA
CAGCTTGAAGTGACCGTACCCTCCAAAGACGTGCAATTACTTGAATTTAAATAA

Upstream 100 bases:

>100_bases
AGGTTTCTTATTCGGGTATGCTTTATTTTTTTACATAAGAACATTGTACCATATGAAAAACCAAAAGCTACTACTAAAAA
AAATGTCGGGAGTATCCCTG

Downstream 100 bases:

>100_bases
CCGAAGAAATGAAAAAATATCAATTAACACTCTTATCGTTATGTGTGGCAGCCTTTGCGCAAGCGAAGGTCACATTGCCG
TCATTCTTTACCGATAATAT

Product: alpha-galactosidase

Products: NA

Alternate protein names: Glycoside Hydrolase/PKD; Coagulation Factor 5/8 Type Domain-Containing Protein; Coagulation Factor 5/8 Type Domain Protein

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MLLLFLFISNCASGDKIFSTDVWNITYDDQQGGIALTYKSKNICNGMYASYQWEGKEIKTSDYARHKISTGKVSDSFGKG
HIYKVEYTDKELPKLTQYFYLYPGKEYILTDFTVEAKEEIRSGRMAPVNVDSISGFLQAGDNRALFVPFDNDKWIRYQSH
PLGFDTLVSYEVTAIFNNESRNGLVIGSVEHDNWKTGISIGKGDRDNIGSLVCYGGIADEQTRDVKAHGALAGKKIKSPK
VFLGFFEDWCDGLEAYAKANAVIAPPKAWEKAVPFGWNSWGALQFNLTYEKAMEVSDYFKENLQNNHFVNPDQTVYIGLD
SGWDCMNEEQLKSFIEKCKSNGQIGGIYWTPFTDWARDPERTVDAAPEYKYKDIYLYANGKPQELDGAYAVDPTHPAVEA
MMKKTSGLFHRAGFEYVKMDFMTHGAMEADKWYNPEITTGIQGYNYGMKLLNQYFGDMYINLSISPVFPAQYAQSRRIAC
DAWNQIKDTEYTLNALSYGWWQKYIYQYNDADHIVLRDATDGENRARITSGVITGIYITGDDFSAGGGKDAKEKSQKYLT
NAAVNAVATGEVFRPVEGNGEKSEHIFVRKTPDGRFHCAVFNYSDQEQTTVLSLERIGLDKARGYQVKELWSGNETFATG
QLEVTVPSKDVQLLEFK

Sequences:

>Translated_657_residues
MLLLFLFISNCASGDKIFSTDVWNITYDDQQGGIALTYKSKNICNGMYASYQWEGKEIKTSDYARHKISTGKVSDSFGKG
HIYKVEYTDKELPKLTQYFYLYPGKEYILTDFTVEAKEEIRSGRMAPVNVDSISGFLQAGDNRALFVPFDNDKWIRYQSH
PLGFDTLVSYEVTAIFNNESRNGLVIGSVEHDNWKTGISIGKGDRDNIGSLVCYGGIADEQTRDVKAHGALAGKKIKSPK
VFLGFFEDWCDGLEAYAKANAVIAPPKAWEKAVPFGWNSWGALQFNLTYEKAMEVSDYFKENLQNNHFVNPDQTVYIGLD
SGWDCMNEEQLKSFIEKCKSNGQIGGIYWTPFTDWARDPERTVDAAPEYKYKDIYLYANGKPQELDGAYAVDPTHPAVEA
MMKKTSGLFHRAGFEYVKMDFMTHGAMEADKWYNPEITTGIQGYNYGMKLLNQYFGDMYINLSISPVFPAQYAQSRRIAC
DAWNQIKDTEYTLNALSYGWWQKYIYQYNDADHIVLRDATDGENRARITSGVITGIYITGDDFSAGGGKDAKEKSQKYLT
NAAVNAVATGEVFRPVEGNGEKSEHIFVRKTPDGRFHCAVFNYSDQEQTTVLSLERIGLDKARGYQVKELWSGNETFATG
QLEVTVPSKDVQLLEFK
>Mature_657_residues
MLLLFLFISNCASGDKIFSTDVWNITYDDQQGGIALTYKSKNICNGMYASYQWEGKEIKTSDYARHKISTGKVSDSFGKG
HIYKVEYTDKELPKLTQYFYLYPGKEYILTDFTVEAKEEIRSGRMAPVNVDSISGFLQAGDNRALFVPFDNDKWIRYQSH
PLGFDTLVSYEVTAIFNNESRNGLVIGSVEHDNWKTGISIGKGDRDNIGSLVCYGGIADEQTRDVKAHGALAGKKIKSPK
VFLGFFEDWCDGLEAYAKANAVIAPPKAWEKAVPFGWNSWGALQFNLTYEKAMEVSDYFKENLQNNHFVNPDQTVYIGLD
SGWDCMNEEQLKSFIEKCKSNGQIGGIYWTPFTDWARDPERTVDAAPEYKYKDIYLYANGKPQELDGAYAVDPTHPAVEA
MMKKTSGLFHRAGFEYVKMDFMTHGAMEADKWYNPEITTGIQGYNYGMKLLNQYFGDMYINLSISPVFPAQYAQSRRIAC
DAWNQIKDTEYTLNALSYGWWQKYIYQYNDADHIVLRDATDGENRARITSGVITGIYITGDDFSAGGGKDAKEKSQKYLT
NAAVNAVATGEVFRPVEGNGEKSEHIFVRKTPDGRFHCAVFNYSDQEQTTVLSLERIGLDKARGYQVKELWSGNETFATG
QLEVTVPSKDVQLLEFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74266; Mature: 74266

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLFLFISNCASGDKIFSTDVWNITYDDQQGGIALTYKSKNICNGMYASYQWEGKEIKT
CEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCEECC
SDYARHKISTGKVSDSFGKGHIYKVEYTDKELPKLTQYFYLYPGKEYILTDFTVEAKEEI
CCHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEECCCEEEEEEEEEHHHHHH
RSGRMAPVNVDSISGFLQAGDNRALFVPFDNDKWIRYQSHPLGFDTLVSYEVTAIFNNES
HCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHEEEEEEEEEEECCC
RNGLVIGSVEHDNWKTGISIGKGDRDNIGSLVCYGGIADEQTRDVKAHGALAGKKIKSPK
CCCEEEEEEECCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCE
VFLGFFEDWCDGLEAYAKANAVIAPPKAWEKAVPFGWNSWGALQFNLTYEKAMEVSDYFK
EEEEEHHHHHHHHHHHHHCCEEECCCHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHH
ENLQNNHFVNPDQTVYIGLDSGWDCMNEEQLKSFIEKCKSNGQIGGIYWTPFTDWARDPE
HHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHCCCCH
RTVDAAPEYKYKDIYLYANGKPQELDGAYAVDPTHPAVEAMMKKTSGLFHRAGFEYVKMD
HHCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHCCCCEEEEE
FMTHGAMEADKWYNPEITTGIQGYNYGMKLLNQYFGDMYINLSISPVFPAQYAQSRRIAC
EHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCEEE
DAWNQIKDTEYTLNALSYGWWQKYIYQYNDADHIVLRDATDGENRARITSGVITGIYITG
CCCCCCCCCEEEHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCEEEEECEEEEEEEEC
DDFSAGGGKDAKEKSQKYLTNAAVNAVATGEVFRPVEGNGEKSEHIFVRKTPDGRFHCAV
CCCCCCCCCCHHHHHHHHHHHHHHCEEECCCEECCCCCCCCCCCEEEEEECCCCCEEEEE
FNYSDQEQTTVLSLERIGLDKARGYQVKELWSGNETFATGQLEVTVPSKDVQLLEFK
EECCCCCCEEEEEHHHCCCCHHCCEEEEHHHCCCCEEEECEEEEEECCCCCEEEEEC
>Mature Secondary Structure
MLLLFLFISNCASGDKIFSTDVWNITYDDQQGGIALTYKSKNICNGMYASYQWEGKEIKT
CEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCEECC
SDYARHKISTGKVSDSFGKGHIYKVEYTDKELPKLTQYFYLYPGKEYILTDFTVEAKEEI
CCHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEECCCEEEEEEEEEHHHHHH
RSGRMAPVNVDSISGFLQAGDNRALFVPFDNDKWIRYQSHPLGFDTLVSYEVTAIFNNES
HCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHEEEEEEEEEEECCC
RNGLVIGSVEHDNWKTGISIGKGDRDNIGSLVCYGGIADEQTRDVKAHGALAGKKIKSPK
CCCEEEEEEECCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCE
VFLGFFEDWCDGLEAYAKANAVIAPPKAWEKAVPFGWNSWGALQFNLTYEKAMEVSDYFK
EEEEEHHHHHHHHHHHHHCCEEECCCHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHH
ENLQNNHFVNPDQTVYIGLDSGWDCMNEEQLKSFIEKCKSNGQIGGIYWTPFTDWARDPE
HHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHCCCCH
RTVDAAPEYKYKDIYLYANGKPQELDGAYAVDPTHPAVEAMMKKTSGLFHRAGFEYVKMD
HHCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHCCCCEEEEE
FMTHGAMEADKWYNPEITTGIQGYNYGMKLLNQYFGDMYINLSISPVFPAQYAQSRRIAC
EHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCEEE
DAWNQIKDTEYTLNALSYGWWQKYIYQYNDADHIVLRDATDGENRARITSGVITGIYITG
CCCCCCCCCEEEHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCEEEEECEEEEEEEEC
DDFSAGGGKDAKEKSQKYLTNAAVNAVATGEVFRPVEGNGEKSEHIFVRKTPDGRFHCAV
CCCCCCCCCCHHHHHHHHHHHHHHCEEECCCEECCCCCCCCCCCEEEEEECCCCCEEEEE
FNYSDQEQTTVLSLERIGLDKARGYQVKELWSGNETFATGQLEVTVPSKDVQLLEFK
EECCCCCCEEEEEHHHCCCCHHCCEEEEHHHCCCCEEEECEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA