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The map label for this gene is aga [H]

Identifier: 29348540

GI number: 29348540

Start: 3991841

End: 3993997

Strand: Reverse

Name: aga [H]

Synonym: BT_3131

Alternate gene names: 29348540

Gene position: 3993997-3991841 (Counterclockwise)

Preceding gene: 29348541

Following gene: 29348539

Centisome position: 63.8

GC content: 46.22

Gene sequence:

>2157_bases
ATGAAATTAAAAGCATTCTTACTTTTTTTTCTATTGAGTTCTTTTTCTCTTTTGCAGGCTGCCGACAAGCCGCTGATCAA
AATAGAAACCGAACGGACCAGCCTTATCTATCAAGTAGCTGACAACGGACGTCTGTATCAGAAATACTTGGGCAAAAAGC
TTAACCATGATTCCGATATCCAGTATCTGCCACAAGGGACTGAAGCTTATCTGACTCACGGTATGGAGGACTACTTTGAA
CCGGCTATTCACATACGTCATAACGATAATAACTCTTCATTGCTGCTGAAATACGTAGATCATTCGAGCAATGCCATCGG
TAACGGGGTCAACGAAACCGTAATTACCCTTAAGGATGATAAATACCCTGTGACCGTGAAGCTGCATTATGTGGCTTACG
GCAAAGAGAACATTATCCGTACGTTTACTGAAATCAGCCATGAAGAGAAGAAACCTGTGATACTTTGCAAGTATGCTTCA
TCAATGCTTCACCTGAACAGCAGCAAGTATTTCCTGACTGAATTTTCCGGTGACTGGGCACACGAAGCCAACGTGACCGA
AAGAGAACTGGCTTTCGGTAAAAAGGTGATCGATACGAAGTTGGGTGCACGTGCCAATATGTTTGTATCTCCTTTCTTCC
AGCTGGCTCTTGACAATCCTTCGCAGGAGAATGCAGGCGAAGTGCTGGTAGGAACCATCGGATGGACGGGTAACTTTCGC
TTTACTTTCGAAGTGGACAACAAAAACGAACTGCGTATTATCAGCGGTATCAACCCGTACGACTCCGAATACAGCCTGCC
CGCCAGAGAAGTGTTCCGTACTCCGGACTTCTATTTCACTTACAGCACGCAGGGGAAAGGTGAGGCCAGCCGTAACTTCC
ATGACTGGGCGCGCAATCATCAGGTGAAAAACGGTAATGATACCCGCATGACTTTGCTCAACAACTGGGAATCTACCTAT
TTTGACTTTGATGAAAATAAACTGATCGGCTTGATGGATGAGGCTACCAAGCTGGGCGTAGATATGTTCCTGCTGGACGA
TGGTTGGTTTGCCAACAAATATCCCCGTAGCAGTGACCATCAGGGGTTGGGCGACTGGGAAGAGACTGCCGACAAACTTC
CGAACGGAGTAGGGCGTCTTGTTGAAGAAGCACAAAAGAAAGGTATCAAGTTCGGTATATGGATAGAGCCGGAAATGGTA
AATCCCAAAAGCGAGCTTTACGAAAAGCATAAGGACTGGGTGATTCATCTGCCTAACCGTGATGAATACTACTTCCGCAA
CCAGATGGTGCTCGACCTTAGCAATCCGAAAGTACAGGATCATGTATTCGGCGTGGTGGACAACCTGATGACCAAATATC
CCGGCATCGCTTTCTTCAAATGGGACTGCAACAGCCCGATTACGAATATCTATTCGGTGTATCTGAAAGATAAACAGTCT
CATCTGTACGTTGATTATGTGCGCGGACTTTACAAGGTGCTGGACAGAATCAAGGCTAAATATCCTAATCTTCCGATGAT
GCTGTGTGCCGGTGGCGGCGGACGCTCCGACTATGAAGCATTGAAGTACTTCACAGAGTTCTGGCCAAGCGACAATACCG
ATCCTATCGAACGCCTGTTTATCCAATGGGGCTATTCGCAGATCTTCCCAAGTAAGACACTGTGTGCCCACGTCACTACT
TGGAATCGTGGAACCAGTATCAAGTTCCGTACCGATGTAGCCATGATGTGCAAATTAGGATTCGACATCAAACTGGAAGA
CATGAATCAGAATGAGCACCTTTACTGTGATCAGGCAGTCAAGAACTACAACCGTCTGAAACCTGTCATCCTTGAAGGTG
ATTTGTATCGCCTCGTTTCTCCTTACGGAAGCAACCATACTTCTTCCATGTTTGTAGGCAAGGACAAGAAAACGGCTGCG
GTATTTGCCTTCGATATCCATCCGCGCTATGCGGAAAAGACATTGCCTGTCCGCCTGCAAGGGTTGAATGCCGACAAGAA
GTACCGTGTGAAGGAAATCAATATGATGCCCGGTAGCGGTTCCTCATTGAAGGGTAACAACCAGGTTTTCTCCGGAGAAT
ATCTAATGAACGTCGGACTGGATCTTTTCACAACACAGCAGCTCAACAGCCGTCTCATTGAAATAACAGAAGAATAA

Upstream 100 bases:

>100_bases
GTGGGCAGACAATCCTGTTTGTAATCTATATGGCAAGAACGGGCTTCCCGTACCCCCGTTCCGCACCAGAGAATAAATAT
CAACCATAACAATGTAAACC

Downstream 100 bases:

>100_bases
AAAGCCATAGACATAAGAAACATATCTTATAAAAACACCATGAACCATGAAGAAATTACTTTTAAGTGTATGTGCATTTT
CATTGACTCTCGCTACGTTG

Product: alpha-galactosidase

Products: NA

Alternate protein names: Melibiase [H]

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MKLKAFLLFFLLSSFSLLQAADKPLIKIETERTSLIYQVADNGRLYQKYLGKKLNHDSDIQYLPQGTEAYLTHGMEDYFE
PAIHIRHNDNNSSLLLKYVDHSSNAIGNGVNETVITLKDDKYPVTVKLHYVAYGKENIIRTFTEISHEEKKPVILCKYAS
SMLHLNSSKYFLTEFSGDWAHEANVTERELAFGKKVIDTKLGARANMFVSPFFQLALDNPSQENAGEVLVGTIGWTGNFR
FTFEVDNKNELRIISGINPYDSEYSLPAREVFRTPDFYFTYSTQGKGEASRNFHDWARNHQVKNGNDTRMTLLNNWESTY
FDFDENKLIGLMDEATKLGVDMFLLDDGWFANKYPRSSDHQGLGDWEETADKLPNGVGRLVEEAQKKGIKFGIWIEPEMV
NPKSELYEKHKDWVIHLPNRDEYYFRNQMVLDLSNPKVQDHVFGVVDNLMTKYPGIAFFKWDCNSPITNIYSVYLKDKQS
HLYVDYVRGLYKVLDRIKAKYPNLPMMLCAGGGGRSDYEALKYFTEFWPSDNTDPIERLFIQWGYSQIFPSKTLCAHVTT
WNRGTSIKFRTDVAMMCKLGFDIKLEDMNQNEHLYCDQAVKNYNRLKPVILEGDLYRLVSPYGSNHTSSMFVGKDKKTAA
VFAFDIHPRYAEKTLPVRLQGLNADKKYRVKEINMMPGSGSSLKGNNQVFSGEYLMNVGLDLFTTQQLNSRLIEITEE

Sequences:

>Translated_718_residues
MKLKAFLLFFLLSSFSLLQAADKPLIKIETERTSLIYQVADNGRLYQKYLGKKLNHDSDIQYLPQGTEAYLTHGMEDYFE
PAIHIRHNDNNSSLLLKYVDHSSNAIGNGVNETVITLKDDKYPVTVKLHYVAYGKENIIRTFTEISHEEKKPVILCKYAS
SMLHLNSSKYFLTEFSGDWAHEANVTERELAFGKKVIDTKLGARANMFVSPFFQLALDNPSQENAGEVLVGTIGWTGNFR
FTFEVDNKNELRIISGINPYDSEYSLPAREVFRTPDFYFTYSTQGKGEASRNFHDWARNHQVKNGNDTRMTLLNNWESTY
FDFDENKLIGLMDEATKLGVDMFLLDDGWFANKYPRSSDHQGLGDWEETADKLPNGVGRLVEEAQKKGIKFGIWIEPEMV
NPKSELYEKHKDWVIHLPNRDEYYFRNQMVLDLSNPKVQDHVFGVVDNLMTKYPGIAFFKWDCNSPITNIYSVYLKDKQS
HLYVDYVRGLYKVLDRIKAKYPNLPMMLCAGGGGRSDYEALKYFTEFWPSDNTDPIERLFIQWGYSQIFPSKTLCAHVTT
WNRGTSIKFRTDVAMMCKLGFDIKLEDMNQNEHLYCDQAVKNYNRLKPVILEGDLYRLVSPYGSNHTSSMFVGKDKKTAA
VFAFDIHPRYAEKTLPVRLQGLNADKKYRVKEINMMPGSGSSLKGNNQVFSGEYLMNVGLDLFTTQQLNSRLIEITEE
>Mature_718_residues
MKLKAFLLFFLLSSFSLLQAADKPLIKIETERTSLIYQVADNGRLYQKYLGKKLNHDSDIQYLPQGTEAYLTHGMEDYFE
PAIHIRHNDNNSSLLLKYVDHSSNAIGNGVNETVITLKDDKYPVTVKLHYVAYGKENIIRTFTEISHEEKKPVILCKYAS
SMLHLNSSKYFLTEFSGDWAHEANVTERELAFGKKVIDTKLGARANMFVSPFFQLALDNPSQENAGEVLVGTIGWTGNFR
FTFEVDNKNELRIISGINPYDSEYSLPAREVFRTPDFYFTYSTQGKGEASRNFHDWARNHQVKNGNDTRMTLLNNWESTY
FDFDENKLIGLMDEATKLGVDMFLLDDGWFANKYPRSSDHQGLGDWEETADKLPNGVGRLVEEAQKKGIKFGIWIEPEMV
NPKSELYEKHKDWVIHLPNRDEYYFRNQMVLDLSNPKVQDHVFGVVDNLMTKYPGIAFFKWDCNSPITNIYSVYLKDKQS
HLYVDYVRGLYKVLDRIKAKYPNLPMMLCAGGGGRSDYEALKYFTEFWPSDNTDPIERLFIQWGYSQIFPSKTLCAHVTT
WNRGTSIKFRTDVAMMCKLGFDIKLEDMNQNEHLYCDQAVKNYNRLKPVILEGDLYRLVSPYGSNHTSSMFVGKDKKTAA
VFAFDIHPRYAEKTLPVRLQGLNADKKYRVKEINMMPGSGSSLKGNNQVFSGEYLMNVGLDLFTTQQLNSRLIEITEE

Specific function: Unknown

COG id: COG3345

COG function: function code G; Alpha-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 36 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002252
- InterPro:   IPR017853
- InterPro:   IPR000111 [H]

Pfam domain/function: PF02065 Melibiase [H]

EC number: =3.2.1.22 [H]

Molecular weight: Translated: 82707; Mature: 82707

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00512 ALPHA_GALACTOSIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKAFLLFFLLSSFSLLQAADKPLIKIETERTSLIYQVADNGRLYQKYLGKKLNHDSDI
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCHHHHHHCHHCCCCCCC
QYLPQGTEAYLTHGMEDYFEPAIHIRHNDNNSSLLLKYVDHSSNAIGNGVNETVITLKDD
EECCCCCHHHHHCCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC
KYPVTVKLHYVAYGKENIIRTFTEISHEEKKPVILCKYASSMLHLNSSKYFLTEFSGDWA
CEEEEEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCC
HEANVTERELAFGKKVIDTKLGARANMFVSPFFQLALDNPSQENAGEVLVGTIGWTGNFR
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEECCCCCCCCCCEEEEEEECCCCEE
FTFEVDNKNELRIISGINPYDSEYSLPAREVFRTPDFYFTYSTQGKGEASRNFHDWARNH
EEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCC
QVKNGNDTRMTLLNNWESTYFDFDENKLIGLMDEATKLGVDMFLLDDGWFANKYPRSSDH
CCCCCCCCEEEEEECCCCCEEECCCCCEEEEEHHHHHCCEEEEEEECCCCCCCCCCCCCC
QGLGDWEETADKLPNGVGRLVEEAQKKGIKFGIWIEPEMVNPKSELYEKHKDWVIHLPNR
CCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCEEEECCCC
DEYYFRNQMVLDLSNPKVQDHVFGVVDNLMTKYPGIAFFKWDCNSPITNIYSVYLKDKQS
CCEEEECEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEEEECCCC
HLYVDYVRGLYKVLDRIKAKYPNLPMMLCAGGGGRSDYEALKYFTEFWPSDNTDPIERLF
EEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
IQWGYSQIFPSKTLCAHVTTWNRGTSIKFRTDVAMMCKLGFDIKLEDMNQNEHLYCDQAV
HHCCHHHHCCCCCEEEEEEECCCCCEEEEECCHHHHHHCCCCEEEECCCCCCCEEEHHHH
KNYNRLKPVILEGDLYRLVSPYGSNHTSSMFVGKDKKTAAVFAFDIHPRYAEKTLPVRLQ
HHHHCCCCEEECCCHHEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEE
GLNADKKYRVKEINMMPGSGSSLKGNNQVFSGEYLMNVGLDLFTTQQLNSRLIEITEE
CCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEECCCCEEEHHHHCCEEEEEECC
>Mature Secondary Structure
MKLKAFLLFFLLSSFSLLQAADKPLIKIETERTSLIYQVADNGRLYQKYLGKKLNHDSDI
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCHHHHHHCHHCCCCCCC
QYLPQGTEAYLTHGMEDYFEPAIHIRHNDNNSSLLLKYVDHSSNAIGNGVNETVITLKDD
EECCCCCHHHHHCCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC
KYPVTVKLHYVAYGKENIIRTFTEISHEEKKPVILCKYASSMLHLNSSKYFLTEFSGDWA
CEEEEEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCC
HEANVTERELAFGKKVIDTKLGARANMFVSPFFQLALDNPSQENAGEVLVGTIGWTGNFR
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEECCCCCCCCCCEEEEEEECCCCEE
FTFEVDNKNELRIISGINPYDSEYSLPAREVFRTPDFYFTYSTQGKGEASRNFHDWARNH
EEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCC
QVKNGNDTRMTLLNNWESTYFDFDENKLIGLMDEATKLGVDMFLLDDGWFANKYPRSSDH
CCCCCCCCEEEEEECCCCCEEECCCCCEEEEEHHHHHCCEEEEEEECCCCCCCCCCCCCC
QGLGDWEETADKLPNGVGRLVEEAQKKGIKFGIWIEPEMVNPKSELYEKHKDWVIHLPNR
CCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCEEEECCCC
DEYYFRNQMVLDLSNPKVQDHVFGVVDNLMTKYPGIAFFKWDCNSPITNIYSVYLKDKQS
CCEEEECEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEEEECCCC
HLYVDYVRGLYKVLDRIKAKYPNLPMMLCAGGGGRSDYEALKYFTEFWPSDNTDPIERLF
EEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
IQWGYSQIFPSKTLCAHVTTWNRGTSIKFRTDVAMMCKLGFDIKLEDMNQNEHLYCDQAV
HHCCHHHHCCCCCEEEEEEECCCCCEEEEECCHHHHHHCCCCEEEECCCCCCCEEEHHHH
KNYNRLKPVILEGDLYRLVSPYGSNHTSSMFVGKDKKTAAVFAFDIHPRYAEKTLPVRLQ
HHHHCCCCEEECCCHHEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEE
GLNADKKYRVKEINMMPGSGSSLKGNNQVFSGEYLMNVGLDLFTTQQLNSRLIEITEE
CCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEECCCCEEEHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1649890; 1660918; 12397186 [H]