| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is cbg-1 [H]
Identifier: 29348418
GI number: 29348418
Start: 3798016
End: 3800607
Strand: Reverse
Name: cbg-1 [H]
Synonym: BT_3009
Alternate gene names: 29348418
Gene position: 3800607-3798016 (Counterclockwise)
Preceding gene: 29348419
Following gene: 29348411
Centisome position: 60.71
GC content: 44.37
Gene sequence:
>2592_bases ATGAAAAAAGTACTGTTAACTTTAAGTTTGAGTATCGTTGCGTCGATGGGCAGCTTCGCGCAGAATGAACCTTATAAGAA TCCGAAACTTACTCCCGAAGAGCGTGCGGAAGACTTATTAGGGAGATTAACTTTGAAAGAGAAAATAGGATTAATGAAAA ATTCTTCTTTTGCGGTAGAACGGTTAGGAGTAGCTCCCTATAATTGGTGGAGTGAGGCTTTGCATGGTGTTGCCCGTAAT GGACTGGCTACAGTGTTTCCGATAACTATGGGTATGGCATCTACCTTTGATGATGAAGCAATTGAAAGAGTGTATGTTGC CGTTAGTGATGAAGGACGTGCTAAATTCCACGATGCCCATCGCAGTAATCGCTATGGATATGGAAACGAAGGGCTTACTT TTTGGAATCCGAATGTGAATATTTTCCGTGATCCGCGTTGGGGGAGGGGACAGGAGACTTTCGGCGAAGACCCTTATCTG ACTACCCGTATGGGAGTAGCTGTAGTAAAGGGAATGCAGGGGCCGGCAGATGCCGAATATGACAAGGCTCATGCGTGTGT CAAGCATTATGCAGTGCATAGTGGTCCTGAGGCGAAACGTCACTCTTTTGATGTAGAAGACCTCTCTCCCCGTGATCTAT GGGAGACTTACCTTCCGGCTTTCAAGGCTTTGGTGCAAGAGGCAGACGTGAAGGAAGTGATGTGCGCTTATCAACGCCTG GAAGGAGAGCCCTGTTGTGATAGCAACCGGTTGTTAACGCAAATATTGAGGGATGAATGGGGCTATAAACATTTGGTTGT AAGTGATTGCGGTGCTATTGATGATTTTTTTGTGAAAGGCCGCCATGAGACACATAAAGATGCTGCCGATGCCAGTGCTT CTGCTGTGATCAATGGAACTGATCTTGAATGTGGTTCGATATATTCGCATTTGGAGGAAGCAGTAAAGCAGGGATTAATC ACAGAAGAACGTATAGACACAAGTTTGCGTCGTTTGTTGAAAGCCCGTTTTGCTTTGGGCGAGATGGATCCGGATTCTAT CGTTCCCTGGAGCAGAATTAGTATAGATACTGTGGATTGTGATTTGCACAAACAGATGGCGTTGGATCTGGCACGTAAAT CTATGGTATTGCTTTGCAATAATGGCGTGCTTCCGTTGGCAAAAACAGGGGCACGTATCGCAGTGATGGGACCGAATGCG GTTGATTCGGTGATGCAATGGGGAAACTATGAAGGTGTACCCTCACATACATATACTATTTTGGAAGGGATTCGCTGCAA GATAGGCGATGTACCTTTTGAGAAAGGATGTGAGTTACTGGATAATCGGATTTTTGAATCTTATTTTAATGAGATCTCCA ACAATGGGCGTCCCGGTCTGACGGCTACCTACTGGAATAATATGAATTTGAGTGGTGATGTCGCGGCTACAAGTCAGATT ACTTCTCCGATTAATCTGAGTAATGGTGGGAATACAGTCTTTGCCACAGGTGTGGGCTTATATAATTTTACTGCTGTTTA TGAAGGAACTTTTCGTCCGAAAGAGAGTGGAGCTTATGAGTTGCTGATTGAAGGAGATGATGGCTATCGGGTATATGTGA ACGGGGAAAAGGTGATTGATTATTGGGGAGAACATGCCAGTGCTAAAAGGGAATATACGTTGAAAGCAATTGCGGGGACA GATTATAAGATCAGAATAGAATATATGCAGGCAGGTGCGGAGGCATTGCTTAGATTTGATTTGGGTATTTATCGTCATAT TTCACCTGAGATGGTTGTCGATAGAGTCAAAGAAGCGGATATTGTTATTTTCGCAGGTGGCATTTCGCCGAGTTTGGAAG GCGAAGAGATGTATTCCGTTAACAGTCCCGGATTTGCTGGCGGCGACCGTACTTCAATTGAACTACCGCAAGTGCAGCGT GATATCCTGAAAGCATTGAAGAAAGCGGGGAAGAAGGTGGTGTTTGTCAACTGTTCCGGATCGGCGGTCGCATTGGTTCC TGAGATGGAGTCTTGTGATGCTATCTTGCAGGCATGGTATCCCGGGCAGTCTGGCGGATTGGCTGTGGCGGACGTTCTGT TCGGAGATTTTAATCCGAGTGGAAAGCTGCCCGTTACTTTTTATAGGAGTACGGACCAGTTGCCGGATTTTGAAGATTAC AGTATGAAGAATCGTACCTATAGATATATGACGGAAGTTCCTTTGTTTCCTTTTGGATACGGATTGAGTTATACTACTTT CGATATTTCTAAAGGACGTTTGAATAAGAAAATTATATCTGCCGGACAGGATTTGAATTTTAAAGTCAATGTGAAGAATA CAGGGAAGTATGATGGAGCTGAAGTTATTCAGGTGTATGTCCGCAAAGTAGATGATGCGGAAGGGCCGATAAAGAGTTTG CGCGCTTTCCGTCGGGTACCGCTGAAGGCGGGAGAGACTTGTGTTGTATCTATTGATCTTTTGCCAACTACATTTGAGTT CTTTGATCCGACTACAAATACTATGCGTATTATGCCCGGAAAATATGAAATCATGTATGGCAATAGTTCGGATATACCTT CGGGGAATAAATTGAGTGTAACACTTCGGTAA
Upstream 100 bases:
>100_bases ATCATAGTTATTGTATTTGAAAACAATGATTAGAATGTAGTTTTCCGATGTGAAATTGCAAGGTAACATAATAAATAAAG CTTTAATTAATTTGGACAAA
Downstream 100 bases:
>100_bases TAATATTACTCATTAATGGGGGTGTCAAAAGTCAGTAGCAATAGCTTGTGTATTCACCTACCACCTCCCCCTGCGGGTAC TCCTCCTTCCCGAAGGAGGA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 863; Mature: 863
Protein sequence:
>863_residues MKKVLLTLSLSIVASMGSFAQNEPYKNPKLTPEERAEDLLGRLTLKEKIGLMKNSSFAVERLGVAPYNWWSEALHGVARN GLATVFPITMGMASTFDDEAIERVYVAVSDEGRAKFHDAHRSNRYGYGNEGLTFWNPNVNIFRDPRWGRGQETFGEDPYL TTRMGVAVVKGMQGPADAEYDKAHACVKHYAVHSGPEAKRHSFDVEDLSPRDLWETYLPAFKALVQEADVKEVMCAYQRL EGEPCCDSNRLLTQILRDEWGYKHLVVSDCGAIDDFFVKGRHETHKDAADASASAVINGTDLECGSIYSHLEEAVKQGLI TEERIDTSLRRLLKARFALGEMDPDSIVPWSRISIDTVDCDLHKQMALDLARKSMVLLCNNGVLPLAKTGARIAVMGPNA VDSVMQWGNYEGVPSHTYTILEGIRCKIGDVPFEKGCELLDNRIFESYFNEISNNGRPGLTATYWNNMNLSGDVAATSQI TSPINLSNGGNTVFATGVGLYNFTAVYEGTFRPKESGAYELLIEGDDGYRVYVNGEKVIDYWGEHASAKREYTLKAIAGT DYKIRIEYMQAGAEALLRFDLGIYRHISPEMVVDRVKEADIVIFAGGISPSLEGEEMYSVNSPGFAGGDRTSIELPQVQR DILKALKKAGKKVVFVNCSGSAVALVPEMESCDAILQAWYPGQSGGLAVADVLFGDFNPSGKLPVTFYRSTDQLPDFEDY SMKNRTYRYMTEVPLFPFGYGLSYTTFDISKGRLNKKIISAGQDLNFKVNVKNTGKYDGAEVIQVYVRKVDDAEGPIKSL RAFRRVPLKAGETCVVSIDLLPTTFEFFDPTTNTMRIMPGKYEIMYGNSSDIPSGNKLSVTLR
Sequences:
>Translated_863_residues MKKVLLTLSLSIVASMGSFAQNEPYKNPKLTPEERAEDLLGRLTLKEKIGLMKNSSFAVERLGVAPYNWWSEALHGVARN GLATVFPITMGMASTFDDEAIERVYVAVSDEGRAKFHDAHRSNRYGYGNEGLTFWNPNVNIFRDPRWGRGQETFGEDPYL TTRMGVAVVKGMQGPADAEYDKAHACVKHYAVHSGPEAKRHSFDVEDLSPRDLWETYLPAFKALVQEADVKEVMCAYQRL EGEPCCDSNRLLTQILRDEWGYKHLVVSDCGAIDDFFVKGRHETHKDAADASASAVINGTDLECGSIYSHLEEAVKQGLI TEERIDTSLRRLLKARFALGEMDPDSIVPWSRISIDTVDCDLHKQMALDLARKSMVLLCNNGVLPLAKTGARIAVMGPNA VDSVMQWGNYEGVPSHTYTILEGIRCKIGDVPFEKGCELLDNRIFESYFNEISNNGRPGLTATYWNNMNLSGDVAATSQI TSPINLSNGGNTVFATGVGLYNFTAVYEGTFRPKESGAYELLIEGDDGYRVYVNGEKVIDYWGEHASAKREYTLKAIAGT DYKIRIEYMQAGAEALLRFDLGIYRHISPEMVVDRVKEADIVIFAGGISPSLEGEEMYSVNSPGFAGGDRTSIELPQVQR DILKALKKAGKKVVFVNCSGSAVALVPEMESCDAILQAWYPGQSGGLAVADVLFGDFNPSGKLPVTFYRSTDQLPDFEDY SMKNRTYRYMTEVPLFPFGYGLSYTTFDISKGRLNKKIISAGQDLNFKVNVKNTGKYDGAEVIQVYVRKVDDAEGPIKSL RAFRRVPLKAGETCVVSIDLLPTTFEFFDPTTNTMRIMPGKYEIMYGNSSDIPSGNKLSVTLR >Mature_863_residues MKKVLLTLSLSIVASMGSFAQNEPYKNPKLTPEERAEDLLGRLTLKEKIGLMKNSSFAVERLGVAPYNWWSEALHGVARN GLATVFPITMGMASTFDDEAIERVYVAVSDEGRAKFHDAHRSNRYGYGNEGLTFWNPNVNIFRDPRWGRGQETFGEDPYL TTRMGVAVVKGMQGPADAEYDKAHACVKHYAVHSGPEAKRHSFDVEDLSPRDLWETYLPAFKALVQEADVKEVMCAYQRL EGEPCCDSNRLLTQILRDEWGYKHLVVSDCGAIDDFFVKGRHETHKDAADASASAVINGTDLECGSIYSHLEEAVKQGLI TEERIDTSLRRLLKARFALGEMDPDSIVPWSRISIDTVDCDLHKQMALDLARKSMVLLCNNGVLPLAKTGARIAVMGPNA VDSVMQWGNYEGVPSHTYTILEGIRCKIGDVPFEKGCELLDNRIFESYFNEISNNGRPGLTATYWNNMNLSGDVAATSQI TSPINLSNGGNTVFATGVGLYNFTAVYEGTFRPKESGAYELLIEGDDGYRVYVNGEKVIDYWGEHASAKREYTLKAIAGT DYKIRIEYMQAGAEALLRFDLGIYRHISPEMVVDRVKEADIVIFAGGISPSLEGEEMYSVNSPGFAGGDRTSIELPQVQR DILKALKKAGKKVVFVNCSGSAVALVPEMESCDAILQAWYPGQSGGLAVADVLFGDFNPSGKLPVTFYRSTDQLPDFEDY SMKNRTYRYMTEVPLFPFGYGLSYTTFDISKGRLNKKIISAGQDLNFKVNVKNTGKYDGAEVIQVYVRKVDDAEGPIKSL RAFRRVPLKAGETCVVSIDLLPTTFEFFDPTTNTMRIMPGKYEIMYGNSSDIPSGNKLSVTLR
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=503, Percent_Identity=30.8151093439364, Blast_Score=201, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 95758; Mature: 95758
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLTLSLSIVASMGSFAQNEPYKNPKLTPEERAEDLLGRLTLKEKIGLMKNSSFAVE CCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RLGVAPYNWWSEALHGVARNGLATVFPITMGMASTFDDEAIERVYVAVSDEGRAKFHDAH HCCCCCCHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCHHHHEEEEEEECCCCCHHHHHHH RSNRYGYGNEGLTFWNPNVNIFRDPRWGRGQETFGEDPYLTTRMGVAVVKGMQGPADAEY CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCH DKAHACVKHYAVHSGPEAKRHSFDVEDLSPRDLWETYLPAFKALVQEADVKEVMCAYQRL HHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC EGEPCCDSNRLLTQILRDEWGYKHLVVSDCGAIDDFFVKGRHETHKDAADASASAVINGT CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCHHHCCCCCCEEEECC DLECGSIYSHLEEAVKQGLITEERIDTSLRRLLKARFALGEMDPDSIVPWSRISIDTVDC CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC DLHKQMALDLARKSMVLLCNNGVLPLAKTGARIAVMGPNAVDSVMQWGNYEGVPSHTYTI HHHHHHHHHHHHCCEEEEECCCCCEEECCCCEEEEECCHHHHHHHHCCCCCCCCCHHHHH LEGIRCKIGDVPFEKGCELLDNRIFESYFNEISNNGRPGLTATYWNNMNLSGDVAATSQI HHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEHHHC TSPINLSNGGNTVFATGVGLYNFTAVYEGTFRPKESGAYELLIEGDDGYRVYVNGEKVID CCCEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCEE YWGEHASAKREYTLKAIAGTDYKIRIEYMQAGAEALLRFDLGIYRHISPEMVVDRVKEAD HHCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC IVIFAGGISPSLEGEEMYSVNSPGFAGGDRTSIELPQVQRDILKALKKAGKKVVFVNCSG EEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEEECCC SAVALVPEMESCDAILQAWYPGQSGGLAVADVLFGDFNPSGKLPVTFYRSTDQLPDFEDY CEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCC SMKNRTYRYMTEVPLFPFGYGLSYTTFDISKGRLNKKIISAGQDLNFKVNVKNTGKYDGA CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCHH EVIQVYVRKVDDAEGPIKSLRAFRRVPLKAGETCVVSIDLLPTTFEFFDPTTNTMRIMPG HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHCCCCCCEEEECCC KYEIMYGNSSDIPSGNKLSVTLR EEEEEECCCCCCCCCCEEEEEEC >Mature Secondary Structure MKKVLLTLSLSIVASMGSFAQNEPYKNPKLTPEERAEDLLGRLTLKEKIGLMKNSSFAVE CCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RLGVAPYNWWSEALHGVARNGLATVFPITMGMASTFDDEAIERVYVAVSDEGRAKFHDAH HCCCCCCHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCHHHHEEEEEEECCCCCHHHHHHH RSNRYGYGNEGLTFWNPNVNIFRDPRWGRGQETFGEDPYLTTRMGVAVVKGMQGPADAEY CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCH DKAHACVKHYAVHSGPEAKRHSFDVEDLSPRDLWETYLPAFKALVQEADVKEVMCAYQRL HHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC EGEPCCDSNRLLTQILRDEWGYKHLVVSDCGAIDDFFVKGRHETHKDAADASASAVINGT CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCHHHCCCCCCEEEECC DLECGSIYSHLEEAVKQGLITEERIDTSLRRLLKARFALGEMDPDSIVPWSRISIDTVDC CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC DLHKQMALDLARKSMVLLCNNGVLPLAKTGARIAVMGPNAVDSVMQWGNYEGVPSHTYTI HHHHHHHHHHHHCCEEEEECCCCCEEECCCCEEEEECCHHHHHHHHCCCCCCCCCHHHHH LEGIRCKIGDVPFEKGCELLDNRIFESYFNEISNNGRPGLTATYWNNMNLSGDVAATSQI HHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEHHHC TSPINLSNGGNTVFATGVGLYNFTAVYEGTFRPKESGAYELLIEGDDGYRVYVNGEKVID CCCEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCEE YWGEHASAKREYTLKAIAGTDYKIRIEYMQAGAEALLRFDLGIYRHISPEMVVDRVKEAD HHCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC IVIFAGGISPSLEGEEMYSVNSPGFAGGDRTSIELPQVQRDILKALKKAGKKVVFVNCSG EEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEEECCC SAVALVPEMESCDAILQAWYPGQSGGLAVADVLFGDFNPSGKLPVTFYRSTDQLPDFEDY CEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCC SMKNRTYRYMTEVPLFPFGYGLSYTTFDISKGRLNKKIISAGQDLNFKVNVKNTGKYDGA CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCHH EVIQVYVRKVDDAEGPIKSLRAFRRVPLKAGETCVVSIDLLPTTFEFFDPTTNTMRIMPG HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHCCCCCCEEEECCC KYEIMYGNSSDIPSGNKLSVTLR EEEEEECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]