| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348411
Identifier: 29348411
GI number: 29348411
Start: 3784282
End: 3784485
Strand: Reverse
Name: 29348411
Synonym: BT_3002
Alternate gene names: NA
Gene position: 3784485-3784282 (Counterclockwise)
Preceding gene: 29348418
Following gene: 29348410
Centisome position: 60.45
GC content: 34.8
Gene sequence:
>204_bases ATGAAGTTGAATAGAATTAAGGCTGTTTTATCCGAAAAAGGTATTTCTCAAACATGGCTGGCAAAGAGACTTGATAAAAG TTTTAGTATGGTCAATGCCTATGCTTGTAATCGGATTCAGCCTAATTTAGATACTTTGCAACTGATCGCTGAGATATTAC AAGTAGACCTTAAGTATTTGATAACCGACAAAAAGGATAGGTGA
Upstream 100 bases:
>100_bases CTGGTGTATTAAAATCATTATTAATGCTGCAAATATAATAAAACAAACTGGTTTGTTGAATATAATTCACTATATTTGCG CAATAAAATTACATTAAAGA
Downstream 100 bases:
>100_bases GATGAAGCAGTTTTCAGAAGCAAAACTGTGTGGCTTTTCCTGTACTTGTCGAAGAACAAAAAAGTAGTAAGTGGCTGGCA GAACAATTAGGAAAAGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MKLNRIKAVLSEKGISQTWLAKRLDKSFSMVNAYACNRIQPNLDTLQLIAEILQVDLKYLITDKKDR
Sequences:
>Translated_67_residues MKLNRIKAVLSEKGISQTWLAKRLDKSFSMVNAYACNRIQPNLDTLQLIAEILQVDLKYLITDKKDR >Mature_67_residues MKLNRIKAVLSEKGISQTWLAKRLDKSFSMVNAYACNRIQPNLDTLQLIAEILQVDLKYLITDKKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7765; Mature: 7765
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNRIKAVLSEKGISQTWLAKRLDKSFSMVNAYACNRIQPNLDTLQLIAEILQVDLKYL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ITDKKDR HCCCCCC >Mature Secondary Structure MKLNRIKAVLSEKGISQTWLAKRLDKSFSMVNAYACNRIQPNLDTLQLIAEILQVDLKYL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ITDKKDR HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA