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The map label for this gene is 29348358

Identifier: 29348358

GI number: 29348358

Start: 3713336

End: 3714526

Strand: Reverse

Name: 29348358

Synonym: BT_2949

Alternate gene names: NA

Gene position: 3714526-3713336 (Counterclockwise)

Preceding gene: 29348359

Following gene: 29348357

Centisome position: 59.33

GC content: 39.97

Gene sequence:

>1191_bases
ATGATACGAATCAGCAATAAAATAAAAACACTTTTGGCTATGTTGTCCTTTGTACAGGTTACTTCGGGCTGTGATGCCAC
TGTACAGGATATCATCATTGACACCGATCCCGGTGTAGAAATCGGTAATAATGATTATTATACATGGTGTAAAGAGACAC
TATCTGTCATTGATAAAGATTTGAAAATAAGTGGTACACATTCTTATTATGAGAATCAGGACCGTTCACAAGTCTCTTTT
ATTTGGGGAAATATTTTCCTTCTTTATACATACACCGAAGGAATCTCATTGAGCAAGTCTGAATGGTCGGATGCTTTGAT
GAACTGCTTTCTTAATTTTGATAACTACTGGCATCCCAACTATAAAGGTATTGCAGGATATGCCACTTTACCTACGAGTG
CCGAGAAGGTTCCCGACCGTTTTTACGACGAAAACGGATGGACAGCAATCGGACTCTGCGATGCTTATCTGGCAACTCAA
AACAATTCTTACTTGGAAAAAGCCAAAGGGGCACTCGCTTTTTCCCTTTCGGGAGAAGATAATGTGCTGGGAGGAGGAAT
TTATTTCCAGGAAACTTTTGTTTCTTTACCCGTACAGAAGAATACGATTTGCTCTGCCGTAACCATGCTGAGTTGTATGA
AACTCTATGAAATCACTCAGGACCGCCAATATCTGGATGCTGCCATCCGCATAAACGACTGGACTGTTGAGAATCTTTTG
GATAAATCGGACAATCTTCTGTGGGATGCCAAAATGGTAGCGGATGGTTCTGTTAATACACAGAAATGGTCATACAATGC
TGGTTTTATGATTAGGAGTTGGCTGAAAATGTATCAGGCCACCAAAGACGAAAAATATTTATCACAGGCAAAAGCTACCC
TGGCATCTTCCGAAGCCAAATGGTATAATTCAATCAACGGAGCTCTGAATGATCCCGGATATTTCGCTTTTTCAATAATA
GACTCTTGGTTTGATATGTATGATACAGATAAAAACACGGTTTGGCTAACGAAAGCTTTCCATGCGATTAACTTTATCCA
CAATAAACTACGTGACGGCAATGGACGCTACCCGGAACACTGGGGAACGCCAACGACAAGCAATCTTGAAAAATATGATT
TAAGGTTTTCTACTGTAGCGGCTTATATGTATATGAGAGCTGCCAATTACAAAAGAATACTCAACGATTAA

Upstream 100 bases:

>100_bases
CTCTATTAAAGATATTACAGGTAAATATCCGGCTACTTTGGTCAACTTAACATGGTCTGATCTTGATAATCTTAATTAAA
CTTTATAAATACTGACTGCT

Downstream 100 bases:

>100_bases
ACTACAGTACCATGAAAATGAAATTATTGATACTGGCCGTTCTTCCATTCCTGACGCCGATTAACATGAACTCACAAGAG
GAAAAAGCCTCATGGGTACA

Product: putative alpha-1,6-mannanase

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Hydrolase; Glycosylhydrolase; Alpha-L-Arabinofuranosidase B Family Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Membrane Attached Hydrolase; Glycosyl Hydrolase

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MIRISNKIKTLLAMLSFVQVTSGCDATVQDIIIDTDPGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSF
IWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQ
NNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLL
DKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAKWYNSINGALNDPGYFAFSII
DSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEHWGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILND

Sequences:

>Translated_396_residues
MIRISNKIKTLLAMLSFVQVTSGCDATVQDIIIDTDPGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSF
IWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQ
NNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLL
DKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAKWYNSINGALNDPGYFAFSII
DSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEHWGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILND
>Mature_396_residues
MIRISNKIKTLLAMLSFVQVTSGCDATVQDIIIDTDPGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSF
IWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQ
NNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLL
DKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAKWYNSINGALNDPGYFAFSII
DSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEHWGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILND

Specific function: Unknown

COG id: COG4833

COG function: function code G; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45213; Mature: 45213

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRISNKIKTLLAMLSFVQVTSGCDATVQDIIIDTDPGVEIGNNDYYTWCKETLSVIDKD
CEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
LKISGTHSYYENQDRSQVSFIWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPN
CEECCCCHHHCCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
YKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGED
CCCCEEEEECCCCHHHCCHHHCCCCCCEEEEEHHHHHHCCCCHHHHHCCCCEEEEECCCC
NVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLL
CEEECCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEHHHHH
DKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAK
CCCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHH
WYNSINGALNDPGYFAFSIIDSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEH
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCC
WGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILND
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MIRISNKIKTLLAMLSFVQVTSGCDATVQDIIIDTDPGVEIGNNDYYTWCKETLSVIDKD
CEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
LKISGTHSYYENQDRSQVSFIWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPN
CEECCCCHHHCCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
YKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGED
CCCCEEEEECCCCHHHCCHHHCCCCCCEEEEEHHHHHHCCCCHHHHHCCCCEEEEECCCC
NVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLL
CEEECCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEHHHHH
DKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAK
CCCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHH
WYNSINGALNDPGYFAFSIIDSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEH
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCC
WGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILND
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA