Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348359

Identifier: 29348359

GI number: 29348359

Start: 3714548

End: 3715495

Strand: Reverse

Name: 29348359

Synonym: BT_2950

Alternate gene names: NA

Gene position: 3715495-3714548 (Counterclockwise)

Preceding gene: 29348360

Following gene: 29348358

Centisome position: 59.35

GC content: 41.88

Gene sequence:

>948_bases
ATGAAAAAGATATTTCATTTAGCTTGTTTTGCTTTCATCCTACTGGCGGCTGCTTGTTCCGATGAAAAAGAAGTGACACT
TGAATATAATAAGATAGACGGTTTGCTTTCTCAATGCAATGAACTTTTATCTTCTTCCTCTGAAGGAGAAGATTTGGGTG
ATTTCGTAACCGGTTCGAAAGCTATTTTCGAAAGTAAGATCCGGGAAACAGAATTTATCCGGAATAAAACTGATCGCCAG
TCAGCTCTCGACAACTATTGCGAAAAGCTGGAGATTGCCCGACAAACATTCCTGTCAAGCAAAGTGCTACCAGCATGTCC
GTTGTTCGACGGAACAGGTTATATCGACTGCGGCCCTGCTTCTCAATTTTTCTCTGATAAGTTGACACTGGAGGCATGGG
TGTATGCCAATGAGAAAACAGGAGGCAGCATAATCGGTTCAGAAGGTTCGGGCGATAACGGCATCTACGGTTTGCTGATT
CGTCTGGCAGAAGGGGTGAATAATGCGATTGACTTTACGATTGTCAACGGTACATGGTCAAGCTGCATTACTCAGGAGAA
CTCTATTGAATTGAAAAAATGGGTACATATTGCCGCTACATTCGACTCGCAAACCGCAAAGGTATACTTAAACGGGCAAG
AAGCCGCAACTATGGATATTGCGCCGTACATTCCCGAAGGTAGTTGTAAATTCATTATTGGCGATCTTTCTACTTGGAAC
GGGCGTCAGTTCAGAGGTAAAATTTATGATGTAAGAATCTGGCATACGATTCGTACTCAACAACAGATTGCCGACAACTA
TCAGATTTTCTTAAAAGGGGACGAAGAAGGATTGGTTGCCAACTGGCAACTGAATGTGAAAAGCGGTTCCTCTATTAAAG
ATATTACAGGTAAATATCCGGCTACTTTGGTCAACTTAACATGGTCTGATCTTGATAATCTTAATTAA

Upstream 100 bases:

>100_bases
ATCTTTTTCCGATTCCCCTGCAGGCAACCAAACTCAATCCTGAGCTGAAACAGAATCCGGGATACACCAAATAAATTGTA
AACGATTAAAAAGAAAAACC

Downstream 100 bases:

>100_bases
ACTTTATAAATACTGACTGCTATGATACGAATCAGCAATAAAATAAAAACACTTTTGGCTATGTTGTCCTTTGTACAGGT
TACTTCGGGCTGTGATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Ig Family Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSKAIFESKIRETEFIRNKTDRQ
SALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPASQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLI
RLAEGVNNAIDFTIVNGTWSSCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN
GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYPATLVNLTWSDLDNLN

Sequences:

>Translated_315_residues
MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSKAIFESKIRETEFIRNKTDRQ
SALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPASQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLI
RLAEGVNNAIDFTIVNGTWSSCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN
GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYPATLVNLTWSDLDNLN
>Mature_315_residues
MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSKAIFESKIRETEFIRNKTDRQ
SALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPASQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLI
RLAEGVNNAIDFTIVNGTWSSCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN
GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYPATLVNLTWSDLDNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34932; Mature: 34932

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSK
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCH
AIFESKIRETEFIRNKTDRQSALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
SQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLIRLAEGVNNAIDFTIVNGTWS
HHHHCCCEEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH
SCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN
HHHCCCCCEEEEHEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCC
GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYP
CCEEECEEEEEEEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHCCCCCC
ATLVNLTWSDLDNLN
EEEEEEEHHHCCCCC
>Mature Secondary Structure
MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSK
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCH
AIFESKIRETEFIRNKTDRQSALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
SQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLIRLAEGVNNAIDFTIVNGTWS
HHHHCCCEEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH
SCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN
HHHCCCCCEEEEHEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCC
GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYP
CCEEECEEEEEEEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHCCCCCC
ATLVNLTWSDLDNLN
EEEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA