| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348359
Identifier: 29348359
GI number: 29348359
Start: 3714548
End: 3715495
Strand: Reverse
Name: 29348359
Synonym: BT_2950
Alternate gene names: NA
Gene position: 3715495-3714548 (Counterclockwise)
Preceding gene: 29348360
Following gene: 29348358
Centisome position: 59.35
GC content: 41.88
Gene sequence:
>948_bases ATGAAAAAGATATTTCATTTAGCTTGTTTTGCTTTCATCCTACTGGCGGCTGCTTGTTCCGATGAAAAAGAAGTGACACT TGAATATAATAAGATAGACGGTTTGCTTTCTCAATGCAATGAACTTTTATCTTCTTCCTCTGAAGGAGAAGATTTGGGTG ATTTCGTAACCGGTTCGAAAGCTATTTTCGAAAGTAAGATCCGGGAAACAGAATTTATCCGGAATAAAACTGATCGCCAG TCAGCTCTCGACAACTATTGCGAAAAGCTGGAGATTGCCCGACAAACATTCCTGTCAAGCAAAGTGCTACCAGCATGTCC GTTGTTCGACGGAACAGGTTATATCGACTGCGGCCCTGCTTCTCAATTTTTCTCTGATAAGTTGACACTGGAGGCATGGG TGTATGCCAATGAGAAAACAGGAGGCAGCATAATCGGTTCAGAAGGTTCGGGCGATAACGGCATCTACGGTTTGCTGATT CGTCTGGCAGAAGGGGTGAATAATGCGATTGACTTTACGATTGTCAACGGTACATGGTCAAGCTGCATTACTCAGGAGAA CTCTATTGAATTGAAAAAATGGGTACATATTGCCGCTACATTCGACTCGCAAACCGCAAAGGTATACTTAAACGGGCAAG AAGCCGCAACTATGGATATTGCGCCGTACATTCCCGAAGGTAGTTGTAAATTCATTATTGGCGATCTTTCTACTTGGAAC GGGCGTCAGTTCAGAGGTAAAATTTATGATGTAAGAATCTGGCATACGATTCGTACTCAACAACAGATTGCCGACAACTA TCAGATTTTCTTAAAAGGGGACGAAGAAGGATTGGTTGCCAACTGGCAACTGAATGTGAAAAGCGGTTCCTCTATTAAAG ATATTACAGGTAAATATCCGGCTACTTTGGTCAACTTAACATGGTCTGATCTTGATAATCTTAATTAA
Upstream 100 bases:
>100_bases ATCTTTTTCCGATTCCCCTGCAGGCAACCAAACTCAATCCTGAGCTGAAACAGAATCCGGGATACACCAAATAAATTGTA AACGATTAAAAAGAAAAACC
Downstream 100 bases:
>100_bases ACTTTATAAATACTGACTGCTATGATACGAATCAGCAATAAAATAAAAACACTTTTGGCTATGTTGTCCTTTGTACAGGT TACTTCGGGCTGTGATGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Ig Family Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSKAIFESKIRETEFIRNKTDRQ SALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPASQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLI RLAEGVNNAIDFTIVNGTWSSCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYPATLVNLTWSDLDNLN
Sequences:
>Translated_315_residues MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSKAIFESKIRETEFIRNKTDRQ SALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPASQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLI RLAEGVNNAIDFTIVNGTWSSCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYPATLVNLTWSDLDNLN >Mature_315_residues MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSKAIFESKIRETEFIRNKTDRQ SALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPASQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLI RLAEGVNNAIDFTIVNGTWSSCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYPATLVNLTWSDLDNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34932; Mature: 34932
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSK CCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCH AIFESKIRETEFIRNKTDRQSALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC SQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLIRLAEGVNNAIDFTIVNGTWS HHHHCCCEEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH SCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN HHHCCCCCEEEEHEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCC GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYP CCEEECEEEEEEEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHCCCCCC ATLVNLTWSDLDNLN EEEEEEEHHHCCCCC >Mature Secondary Structure MKKIFHLACFAFILLAAACSDEKEVTLEYNKIDGLLSQCNELLSSSSEGEDLGDFVTGSK CCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCH AIFESKIRETEFIRNKTDRQSALDNYCEKLEIARQTFLSSKVLPACPLFDGTGYIDCGPA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC SQFFSDKLTLEAWVYANEKTGGSIIGSEGSGDNGIYGLLIRLAEGVNNAIDFTIVNGTWS HHHHCCCEEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH SCITQENSIELKKWVHIAATFDSQTAKVYLNGQEAATMDIAPYIPEGSCKFIIGDLSTWN HHHCCCCCEEEEHEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCC GRQFRGKIYDVRIWHTIRTQQQIADNYQIFLKGDEEGLVANWQLNVKSGSSIKDITGKYP CCEEECEEEEEEEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHCCCCCC ATLVNLTWSDLDNLN EEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA