Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348357

Identifier: 29348357

GI number: 29348357

Start: 3710631

End: 3713324

Strand: Reverse

Name: 29348357

Synonym: BT_2948

Alternate gene names: NA

Gene position: 3713324-3710631 (Counterclockwise)

Preceding gene: 29348358

Following gene: 29348354

Centisome position: 59.31

GC content: 41.87

Gene sequence:

>2694_bases
ATGAAAATGAAATTATTGATACTGGCCGTTCTTCCATTCCTGACGCCGATTAACATGAACTCACAAGAGGAAAAAGCCTC
ATGGGTACAGTATGTCAACCCATTGATTGGAACAGAAGTATGGCAATCCGGAGTAGCGGTTGCCGGGCATGAAGATCCTT
CGGGATATACTTTTCCCGGAGTGACAGAGCCTTTCGGGATGACAGAATGGACTGCCCATACTTTAGAGAGCAAGCACGCT
GGAACGCTGCACCATCGGGTACCCTACTGGTATAAACATAACTATATTTCGGGATTTATGGGAACACACTATCCAAGTGG
GGCCGTCATGTTCGATTATGGTGCTGTTGAACTAATGCCGGTTGTCGGACAACTGAAATGCAGGCCCGAAGAGCGTAGTT
CTTCTTTTACCCATATAACCGAAAAGTCAAAACCTCACTTCTACGAAGTCATGTTGGACGACTATCAGGTAAAAGCTCAA
TTATCGGCTACAAAAACTTCAGCTATCCTGCAATTTACCTATCCCCAGTCGGATAGTGCTTACGTAGTGGTAGATGCTAT
GCCTTCCATGTTTACAGCCGGAGCACCGGGCTACATTCACATAGACCCGGTACGAAAAGAAATTTCCGGTAAAAGCATAC
AATCTGCCAGAGGATATCGGGAAACCGGATATTTTGTAGTCCGTTTCGATAAGGATTTCGACTCTTTCGGCACGTTTAAT
CTTAATAATGATTATCCCGAAGTAATCGAAGAGAAATATCTGTTCACTCAAAAAGAAGGCAAGTGGGTCAATGGCTTAAA
AGGGATTTATACACAGGACTCAAAGGGGGTCGGACATCTGCGGAGTGAAAAAATCGATCCGGTTATCGATTTTGACTGGG
ACTGGTATAAACCTGCGGATGATTTCAGTTTTAATGATTACCAGGTGACCTGGAGCGGTAAACTCAAAGCTCCCTCTACC
GGTGAATATACATTAGGGATACAAGCTGACGACGGAGCACGATTATATATCAACGGAGAATTGCTCATCGATGACTGGAA
ATCTCATAGTTTCAGCTATCAACCTACCCAAAAGAAGATTTCTCTGGAAGCCGGTAAAATGTATGATATAAAATTGGAAT
ATTATCAGCATGAATGGAGCTCACGGATAAAACTGAGTTGGATCAGGCCTGATAAAAAGTCATCAACATCCCTTCTGACT
GGCAATCGACATTTGGAATCGTCTACCAAAATAGGGGGATATATCCGTTTTAAAACCGGAAAAAATGAAGTAATTAAAGC
CATCGTTGGCACATCCTTTATTAGTGTGGAACAGGCACGGATAAATCTGGAAAGAGAAATCGGAGCCAAAAGTATGGAAA
CAATCAGTGCACAAACAGAAGCATTATGGAATAAAGAATTATCAGTCATCGATTTGCCCGGAGCTACAGAACAAGATAAA
ATTGTTTTTTATACAGCGCTATATCACTCTTTCCTGTTGCCCAGAAGTCTATCTGAAGATGGAAAATACAGAAGTCCGTT
TGATGGAAAAGTACATAAGGGTATTAGCTTTACAGACTATTCTATATGGGACACATTCAGAGCGACCCATCCTCTGTTCG
TATTACTGAAACCCGATTTTGCGGGAGATCTCATAACCGGACTCCTCCATGCCTACGATGAGGGAGGCTGGCTTCCCAAA
TGGCCTAATCCGGGATATACCAACTGCATGATGGGAACTCATAGTGATGCCATAATAGCGGATGCTTATGTAAAAGGAGT
GCGTAACTTTGATGTAGAGAAAGCTAAAAAAGCAGTGCTGAAAAATGCGTATGAAAAGGGTAACCACATTGCTTGGGGAC
GCTTGGGCATTATGGACTACGAACGATTGGGATATGTACCTGTTGATAAATATGGAGAATCAGTAGCCAGAACGATGGAG
TTTGCCTATGATGATTATTGTCTCTCCCGTTTCTTTGCCGAAAAAGGTGAACCGGACTTATCGGATAAACTAGGTAAACG
AAGCAAAAATTTCAGGAACGTACTGGATAAGGAAACCAAAATGGTTCGTGCGCGTAAAGCAGATGGTTCATGGAGTAATC
CGGAAGATTACGATATCAGCGTATGGAGTGGTTTTAACCCCAAAGGAGTGTACAACTATAAAAAGAATTATACGTTGTTC
GTTCCCCATGATGTTCCCGAACTAATTCGCTTTTTGGGAGGTACCGATTCTTTAGCCGTTTTTATGGATGAACTATTCGA
TAAAGATATTTACTATGTGGGTGACGAATTTGTGATGCATGCTCCCTATATGTATAATCTCTGTAAAAGACCGTGGATGA
CTCAAAAAAGAATATATGATATAGTCAATAAATACTATCTGCCCACACCTAGCGGACTGCCGGGAAATGACGACTGTGGA
CAATTAAGTTCATGGTATATCTTCAGTGCGATGGGATTCTATCCCATGTGTCCGGCTTCTATTGAATATCAGTTAGGAGT
TCCCTGTCTGCCGGGCTTTGTATTGCATTTGCCTCAAAATAGAACATTCACAATTAAAACAAAGAATTTCGGCAAAGGCA
ATTGTTATGTACGCGCTGTATATCTCAATGGCAAGCCTCACCGTAGTTCTGTCATAACTCATTCAGATATTATTAACGGT
GGGGAGATTTTATTCGAATTAACAGATAAGCCTGCATATAATTGGTTTCAATAG

Upstream 100 bases:

>100_bases
ATCTTGAAAAATATGATTTAAGGTTTTCTACTGTAGCGGCTTATATGTATATGAGAGCTGCCAATTACAAAAGAATACTC
AACGATTAAACTACAGTACC

Downstream 100 bases:

>100_bases
GTAATATATAAATAGGAGTTTTGTGGGTGAAGTGACTATACTGATTTTAAGTGGCAGTTATTGTCCCGGCTTGATAATCA
ACCGCAGTACAAACCAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Outer Membrane Protein; Glycoside Hydrolase Family Protein; Cell Wall Antigen; Glycosyl Hydrolase; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Mannosidase

Number of amino acids: Translated: 897; Mature: 897

Protein sequence:

>897_residues
MKMKLLILAVLPFLTPINMNSQEEKASWVQYVNPLIGTEVWQSGVAVAGHEDPSGYTFPGVTEPFGMTEWTAHTLESKHA
GTLHHRVPYWYKHNYISGFMGTHYPSGAVMFDYGAVELMPVVGQLKCRPEERSSSFTHITEKSKPHFYEVMLDDYQVKAQ
LSATKTSAILQFTYPQSDSAYVVVDAMPSMFTAGAPGYIHIDPVRKEISGKSIQSARGYRETGYFVVRFDKDFDSFGTFN
LNNDYPEVIEEKYLFTQKEGKWVNGLKGIYTQDSKGVGHLRSEKIDPVIDFDWDWYKPADDFSFNDYQVTWSGKLKAPST
GEYTLGIQADDGARLYINGELLIDDWKSHSFSYQPTQKKISLEAGKMYDIKLEYYQHEWSSRIKLSWIRPDKKSSTSLLT
GNRHLESSTKIGGYIRFKTGKNEVIKAIVGTSFISVEQARINLEREIGAKSMETISAQTEALWNKELSVIDLPGATEQDK
IVFYTALYHSFLLPRSLSEDGKYRSPFDGKVHKGISFTDYSIWDTFRATHPLFVLLKPDFAGDLITGLLHAYDEGGWLPK
WPNPGYTNCMMGTHSDAIIADAYVKGVRNFDVEKAKKAVLKNAYEKGNHIAWGRLGIMDYERLGYVPVDKYGESVARTME
FAYDDYCLSRFFAEKGEPDLSDKLGKRSKNFRNVLDKETKMVRARKADGSWSNPEDYDISVWSGFNPKGVYNYKKNYTLF
VPHDVPELIRFLGGTDSLAVFMDELFDKDIYYVGDEFVMHAPYMYNLCKRPWMTQKRIYDIVNKYYLPTPSGLPGNDDCG
QLSSWYIFSAMGFYPMCPASIEYQLGVPCLPGFVLHLPQNRTFTIKTKNFGKGNCYVRAVYLNGKPHRSSVITHSDIING
GEILFELTDKPAYNWFQ

Sequences:

>Translated_897_residues
MKMKLLILAVLPFLTPINMNSQEEKASWVQYVNPLIGTEVWQSGVAVAGHEDPSGYTFPGVTEPFGMTEWTAHTLESKHA
GTLHHRVPYWYKHNYISGFMGTHYPSGAVMFDYGAVELMPVVGQLKCRPEERSSSFTHITEKSKPHFYEVMLDDYQVKAQ
LSATKTSAILQFTYPQSDSAYVVVDAMPSMFTAGAPGYIHIDPVRKEISGKSIQSARGYRETGYFVVRFDKDFDSFGTFN
LNNDYPEVIEEKYLFTQKEGKWVNGLKGIYTQDSKGVGHLRSEKIDPVIDFDWDWYKPADDFSFNDYQVTWSGKLKAPST
GEYTLGIQADDGARLYINGELLIDDWKSHSFSYQPTQKKISLEAGKMYDIKLEYYQHEWSSRIKLSWIRPDKKSSTSLLT
GNRHLESSTKIGGYIRFKTGKNEVIKAIVGTSFISVEQARINLEREIGAKSMETISAQTEALWNKELSVIDLPGATEQDK
IVFYTALYHSFLLPRSLSEDGKYRSPFDGKVHKGISFTDYSIWDTFRATHPLFVLLKPDFAGDLITGLLHAYDEGGWLPK
WPNPGYTNCMMGTHSDAIIADAYVKGVRNFDVEKAKKAVLKNAYEKGNHIAWGRLGIMDYERLGYVPVDKYGESVARTME
FAYDDYCLSRFFAEKGEPDLSDKLGKRSKNFRNVLDKETKMVRARKADGSWSNPEDYDISVWSGFNPKGVYNYKKNYTLF
VPHDVPELIRFLGGTDSLAVFMDELFDKDIYYVGDEFVMHAPYMYNLCKRPWMTQKRIYDIVNKYYLPTPSGLPGNDDCG
QLSSWYIFSAMGFYPMCPASIEYQLGVPCLPGFVLHLPQNRTFTIKTKNFGKGNCYVRAVYLNGKPHRSSVITHSDIING
GEILFELTDKPAYNWFQ
>Mature_897_residues
MKMKLLILAVLPFLTPINMNSQEEKASWVQYVNPLIGTEVWQSGVAVAGHEDPSGYTFPGVTEPFGMTEWTAHTLESKHA
GTLHHRVPYWYKHNYISGFMGTHYPSGAVMFDYGAVELMPVVGQLKCRPEERSSSFTHITEKSKPHFYEVMLDDYQVKAQ
LSATKTSAILQFTYPQSDSAYVVVDAMPSMFTAGAPGYIHIDPVRKEISGKSIQSARGYRETGYFVVRFDKDFDSFGTFN
LNNDYPEVIEEKYLFTQKEGKWVNGLKGIYTQDSKGVGHLRSEKIDPVIDFDWDWYKPADDFSFNDYQVTWSGKLKAPST
GEYTLGIQADDGARLYINGELLIDDWKSHSFSYQPTQKKISLEAGKMYDIKLEYYQHEWSSRIKLSWIRPDKKSSTSLLT
GNRHLESSTKIGGYIRFKTGKNEVIKAIVGTSFISVEQARINLEREIGAKSMETISAQTEALWNKELSVIDLPGATEQDK
IVFYTALYHSFLLPRSLSEDGKYRSPFDGKVHKGISFTDYSIWDTFRATHPLFVLLKPDFAGDLITGLLHAYDEGGWLPK
WPNPGYTNCMMGTHSDAIIADAYVKGVRNFDVEKAKKAVLKNAYEKGNHIAWGRLGIMDYERLGYVPVDKYGESVARTME
FAYDDYCLSRFFAEKGEPDLSDKLGKRSKNFRNVLDKETKMVRARKADGSWSNPEDYDISVWSGFNPKGVYNYKKNYTLF
VPHDVPELIRFLGGTDSLAVFMDELFDKDIYYVGDEFVMHAPYMYNLCKRPWMTQKRIYDIVNKYYLPTPSGLPGNDDCG
QLSSWYIFSAMGFYPMCPASIEYQLGVPCLPGFVLHLPQNRTFTIKTKNFGKGNCYVRAVYLNGKPHRSSVITHSDIING
GEILFELTDKPAYNWFQ

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102286; Mature: 102286

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00334 MYB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKLLILAVLPFLTPINMNSQEEKASWVQYVNPLIGTEVWQSGVAVAGHEDPSGYTFPG
CCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
VTEPFGMTEWTAHTLESKHAGTLHHRVPYWYKHNYISGFMGTHYPSGAVMFDYGAVELMP
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCEEEEE
VVGQLKCRPEERSSSFTHITEKSKPHFYEVMLDDYQVKAQLSATKTSAILQFTYPQSDSA
HHCCEECCCHHHCCCEEEEECCCCCCEEEEEECCEEEEEEEECCCCEEEEEEECCCCCCC
YVVVDAMPSMFTAGAPGYIHIDPVRKEISGKSIQSARGYRETGYFVVRFDKDFDSFGTFN
EEEEECCCHHHHCCCCCEEEECHHHHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCCEEC
LNNDYPEVIEEKYLFTQKEGKWVNGLKGIYTQDSKGVGHLRSEKIDPVIDFDWDWYKPAD
CCCCCHHHHHHHHEEECCCCCCCCCCCCEEECCCCCCCCHHHCCCCCEEECCCCCCCCCC
DFSFNDYQVTWSGKLKAPSTGEYTLGIQADDGARLYINGELLIDDWKSHSFSYQPTQKKI
CCCCCCEEEEECCEECCCCCCCEEEEEEECCCCEEEEECEEEEECCCCCCCCCCCCCCEE
SLEAGKMYDIKLEYYQHEWSSRIKLSWIRPDKKSSTSLLTGNRHLESSTKIGGYIRFKTG
EECCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
KNEVIKAIVGTSFISVEQARINLEREIGAKSMETISAQTEALWNKELSVIDLPGATEQDK
HHHHHHHHHCCHHEEEEHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
IVFYTALYHSFLLPRSLSEDGKYRSPFDGKVHKGISFTDYSIWDTFRATHPLFVLLKPDF
EEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCCCCEEEEECCCC
AGDLITGLLHAYDEGGWLPKWPNPGYTNCMMGTHSDAIIADAYVKGVRNFDVEKAKKAVL
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHHHCCCCHHHHHHHHH
KNAYEKGNHIAWGRLGIMDYERLGYVPVDKYGESVARTMEFAYDDYCLSRFFAEKGEPDL
HHHHHCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SDKLGKRSKNFRNVLDKETKMVRARKADGSWSNPEDYDISVWSGFNPKGVYNYKKNYTLF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCEEEE
VPHDVPELIRFLGGTDSLAVFMDELFDKDIYYVGDEFVMHAPYMYNLCKRPWMTQKRIYD
CCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHEEECCHHHHHHCCCCCHHHHHHH
IVNKYYLPTPSGLPGNDDCGQLSSWYIFSAMGFYPMCPASIEYQLGVPCLPGFVLHLPQN
HHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCC
RTFTIKTKNFGKGNCYVRAVYLNGKPHRSSVITHSDIINGGEILFELTDKPAYNWFQ
CEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEHHHCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKMKLLILAVLPFLTPINMNSQEEKASWVQYVNPLIGTEVWQSGVAVAGHEDPSGYTFPG
CCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
VTEPFGMTEWTAHTLESKHAGTLHHRVPYWYKHNYISGFMGTHYPSGAVMFDYGAVELMP
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCEEEEE
VVGQLKCRPEERSSSFTHITEKSKPHFYEVMLDDYQVKAQLSATKTSAILQFTYPQSDSA
HHCCEECCCHHHCCCEEEEECCCCCCEEEEEECCEEEEEEEECCCCEEEEEEECCCCCCC
YVVVDAMPSMFTAGAPGYIHIDPVRKEISGKSIQSARGYRETGYFVVRFDKDFDSFGTFN
EEEEECCCHHHHCCCCCEEEECHHHHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCCEEC
LNNDYPEVIEEKYLFTQKEGKWVNGLKGIYTQDSKGVGHLRSEKIDPVIDFDWDWYKPAD
CCCCCHHHHHHHHEEECCCCCCCCCCCCEEECCCCCCCCHHHCCCCCEEECCCCCCCCCC
DFSFNDYQVTWSGKLKAPSTGEYTLGIQADDGARLYINGELLIDDWKSHSFSYQPTQKKI
CCCCCCEEEEECCEECCCCCCCEEEEEEECCCCEEEEECEEEEECCCCCCCCCCCCCCEE
SLEAGKMYDIKLEYYQHEWSSRIKLSWIRPDKKSSTSLLTGNRHLESSTKIGGYIRFKTG
EECCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
KNEVIKAIVGTSFISVEQARINLEREIGAKSMETISAQTEALWNKELSVIDLPGATEQDK
HHHHHHHHHCCHHEEEEHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
IVFYTALYHSFLLPRSLSEDGKYRSPFDGKVHKGISFTDYSIWDTFRATHPLFVLLKPDF
EEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCCCCEEEEECCCC
AGDLITGLLHAYDEGGWLPKWPNPGYTNCMMGTHSDAIIADAYVKGVRNFDVEKAKKAVL
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHHHCCCCHHHHHHHHH
KNAYEKGNHIAWGRLGIMDYERLGYVPVDKYGESVARTMEFAYDDYCLSRFFAEKGEPDL
HHHHHCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SDKLGKRSKNFRNVLDKETKMVRARKADGSWSNPEDYDISVWSGFNPKGVYNYKKNYTLF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCEEEE
VPHDVPELIRFLGGTDSLAVFMDELFDKDIYYVGDEFVMHAPYMYNLCKRPWMTQKRIYD
CCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHEEECCHHHHHHCCCCCHHHHHHH
IVNKYYLPTPSGLPGNDDCGQLSSWYIFSAMGFYPMCPASIEYQLGVPCLPGFVLHLPQN
HHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCC
RTFTIKTKNFGKGNCYVRAVYLNGKPHRSSVITHSDIINGGEILFELTDKPAYNWFQ
CEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEHHHCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA