| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348311
Identifier: 29348311
GI number: 29348311
Start: 3631668
End: 3632876
Strand: Reverse
Name: 29348311
Synonym: BT_2902
Alternate gene names: NA
Gene position: 3632876-3631668 (Counterclockwise)
Preceding gene: 29348312
Following gene: 29348310
Centisome position: 58.03
GC content: 38.54
Gene sequence:
>1209_bases ATGAAATATTTATATAAGATAGGATTAATACTTAGTGTTGTATTGACTGCCGGAGCTTGCTCCGGTCAGTTGGACACGAT CCAAGAGTATCTGGATGCCGGTGAAACTATCTATGCGGCAAAAATGGATTCTGTTGACATACGTCCTGGATATAATCGGG TAGAAGTAACGGGATTACTTAAATATGGTATGGATACAGAAAGGTGCGTTATTCATTGGACACCGGACAATGACTCTTTA GTAGTGCCTGTTAAACGGATAGATCCGGTAGATACTTTTCGTGTTTTTATAGAGAATTTACCTGAAGGTACTTATCAATT TGAGATTGTTACCTATAACAAAAGTGGGTATCGTTCTATTTCAACCTCAAAAGGAAGTAAAACTTATGGTGATCGGTACA TAAGTTCTTTACGGGTACGTTCTTTGTTGAGTACAGAGGTTGAAGGGGAAAATCTGTTACTAAATTTTTCCTCAGAAATG GCCGAAGCATTGGCAACTAAAGTGTTTTATCTGAATAGTGCCGGCGAGAAGCAGGAACAAGAGGTGGCAAGAGGAGATAA TCAGATTAAGATTACTGATTGGAAGCCGCGGGGAGCCTATGAAGTCAAAACATATTATATTCCGGAGGTGAATGCAGTAG ATACTTTCTCTGTTTCTTCAACGGGGGTATTCCCAGAAAAAATAGTTGAAATGGATAAAAGTACATTCCGTGAAATAATA CTGGATAATGATATCCGATTGAACGCTTGGGGAGGAGCATTATGGAAAGCATGGGATAATGCATACGAAAATACAAACTA TGCACATAGTGATAATACGAATCCGATCGTTTTTCCTGCTTGGTTTACTTTCGATTTAGGAGAGAAAGCTCTTTTAAAGC GTTTTGACTTGTTTTCGGTTGTTCGTGATGATTTGAATTATAATGGAGGAAATATGAAGAGCTGGGAAATCTGGGGTAGA GAAGATGAACCGGCAAATTCTTCTTGGGATGGATGGACTAAGCTGATAACTTGTAATTCTTTCAAGCCTTCTGGCAAGCC TGTTGGCGAGAATACGGATGAAGACAATTCTTATATAGCAAAAGGAGAAAAGTTTGATTTTCCATCAGGTATTCCGGAGG TTCGCTATATAAGAATTAAGGTTCTCGATTCATGGAGTGGACAGGGATATGTACAGTTCTCGGAATTTACATTTTATAAA AGTGAATAA
Upstream 100 bases:
>100_bases GTTTCAAGGTTCTTGAAACATGGGGAGGTATGGACTTTATACACTTTACAGAATTTACTTTCTGGGGCAATGTAATATCT AACAATTAAAAGAGCTGAAT
Downstream 100 bases:
>100_bases AAATGAAACATCTACTTGCTGGTATTTTAGTATGGGTGATATGGGGACTTTGTTCTTGTCAGTCTGATGGTAAGGTGATC ATTCCTTCACCCATTTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKYLYKIGLILSVVLTAGACSGQLDTIQEYLDAGETIYAAKMDSVDIRPGYNRVEVTGLLKYGMDTERCVIHWTPDNDSL VVPVKRIDPVDTFRVFIENLPEGTYQFEIVTYNKSGYRSISTSKGSKTYGDRYISSLRVRSLLSTEVEGENLLLNFSSEM AEALATKVFYLNSAGEKQEQEVARGDNQIKITDWKPRGAYEVKTYYIPEVNAVDTFSVSSTGVFPEKIVEMDKSTFREII LDNDIRLNAWGGALWKAWDNAYENTNYAHSDNTNPIVFPAWFTFDLGEKALLKRFDLFSVVRDDLNYNGGNMKSWEIWGR EDEPANSSWDGWTKLITCNSFKPSGKPVGENTDEDNSYIAKGEKFDFPSGIPEVRYIRIKVLDSWSGQGYVQFSEFTFYK SE
Sequences:
>Translated_402_residues MKYLYKIGLILSVVLTAGACSGQLDTIQEYLDAGETIYAAKMDSVDIRPGYNRVEVTGLLKYGMDTERCVIHWTPDNDSL VVPVKRIDPVDTFRVFIENLPEGTYQFEIVTYNKSGYRSISTSKGSKTYGDRYISSLRVRSLLSTEVEGENLLLNFSSEM AEALATKVFYLNSAGEKQEQEVARGDNQIKITDWKPRGAYEVKTYYIPEVNAVDTFSVSSTGVFPEKIVEMDKSTFREII LDNDIRLNAWGGALWKAWDNAYENTNYAHSDNTNPIVFPAWFTFDLGEKALLKRFDLFSVVRDDLNYNGGNMKSWEIWGR EDEPANSSWDGWTKLITCNSFKPSGKPVGENTDEDNSYIAKGEKFDFPSGIPEVRYIRIKVLDSWSGQGYVQFSEFTFYK SE >Mature_402_residues MKYLYKIGLILSVVLTAGACSGQLDTIQEYLDAGETIYAAKMDSVDIRPGYNRVEVTGLLKYGMDTERCVIHWTPDNDSL VVPVKRIDPVDTFRVFIENLPEGTYQFEIVTYNKSGYRSISTSKGSKTYGDRYISSLRVRSLLSTEVEGENLLLNFSSEM AEALATKVFYLNSAGEKQEQEVARGDNQIKITDWKPRGAYEVKTYYIPEVNAVDTFSVSSTGVFPEKIVEMDKSTFREII LDNDIRLNAWGGALWKAWDNAYENTNYAHSDNTNPIVFPAWFTFDLGEKALLKRFDLFSVVRDDLNYNGGNMKSWEIWGR EDEPANSSWDGWTKLITCNSFKPSGKPVGENTDEDNSYIAKGEKFDFPSGIPEVRYIRIKVLDSWSGQGYVQFSEFTFYK SE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45720; Mature: 45720
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLYKIGLILSVVLTAGACSGQLDTIQEYLDAGETIYAAKMDSVDIRPGYNRVEVTGLL CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEEEE KYGMDTERCVIHWTPDNDSLVVPVKRIDPVDTFRVFIENLPEGTYQFEIVTYNKSGYRSI ECCCCCCEEEEEECCCCCCEEEEEHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCEE STSKGSKTYGDRYISSLRVRSLLSTEVEGENLLLNFSSEMAEALATKVFYLNSAGEKQEQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEEEEECCCCCHHHH EVARGDNQIKITDWKPRGAYEVKTYYIPEVNAVDTFSVSSTGVFPEKIVEMDKSTFREII HHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH LDNDIRLNAWGGALWKAWDNAYENTNYAHSDNTNPIVFPAWFTFDLGEKALLKRFDLFSV CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH VRDDLNYNGGNMKSWEIWGREDEPANSSWDGWTKLITCNSFKPSGKPVGENTDEDNSYIA HHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE KGEKFDFPSGIPEVRYIRIKVLDSWSGQGYVQFSEFTFYKSE CCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECC >Mature Secondary Structure MKYLYKIGLILSVVLTAGACSGQLDTIQEYLDAGETIYAAKMDSVDIRPGYNRVEVTGLL CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEEEE KYGMDTERCVIHWTPDNDSLVVPVKRIDPVDTFRVFIENLPEGTYQFEIVTYNKSGYRSI ECCCCCCEEEEEECCCCCCEEEEEHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCEE STSKGSKTYGDRYISSLRVRSLLSTEVEGENLLLNFSSEMAEALATKVFYLNSAGEKQEQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEEEEECCCCCHHHH EVARGDNQIKITDWKPRGAYEVKTYYIPEVNAVDTFSVSSTGVFPEKIVEMDKSTFREII HHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH LDNDIRLNAWGGALWKAWDNAYENTNYAHSDNTNPIVFPAWFTFDLGEKALLKRFDLFSV CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH VRDDLNYNGGNMKSWEIWGREDEPANSSWDGWTKLITCNSFKPSGKPVGENTDEDNSYIA HHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE KGEKFDFPSGIPEVRYIRIKVLDSWSGQGYVQFSEFTFYKSE CCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA