Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348310

Identifier: 29348310

GI number: 29348310

Start: 3630640

End: 3631665

Strand: Reverse

Name: 29348310

Synonym: BT_2901

Alternate gene names: NA

Gene position: 3631665-3630640 (Counterclockwise)

Preceding gene: 29348311

Following gene: 29348309

Centisome position: 58.01

GC content: 42.59

Gene sequence:

>1026_bases
ATGAAACATCTACTTGCTGGTATTTTAGTATGGGTGATATGGGGACTTTGTTCTTGTCAGTCTGATGGTAAGGTGATCAT
TCCTTCACCCATTTATGTAGATAATCACTATCATGGTCCGGCTGATCCGGAGATAACCTGGAATCCTAAAACAGAAGAAT
GGATGATTTTTTATACATCACGTCGTCCTTTTAAAGATCAGGCTTCTTATGTAGGAACGCCTGTGGGGGTTGCTGTGTCC
AAAGATTTTGTACATTGGAAGTTTGCGGGATATTGCTCGTTCGATGGTGTAGGCGGTCAGCCGGATAGTGAGAAAACGTA
TTGGGCACCGGGTGTGATTGTGGAAGGTGATAGTGCCCATATGTTTGTGACTTTGAAAGATGACTCTACTCCGGTCTGGG
GTGGACCTAGTAACATTGTTCATTTCTCTGCACCTTTGGAAGATATGATTTCAGGGTGGAGACGGGTAAATACAGTGGTG
GATACTCCGATTTCTATTGATGCGACTGTTGTAAAGAATGGTGATCGTTGGGATATGTGGTATCGTGACCGTCCGACAGA
AGATACAGGCGGATTGTATTATGCACAAAGTAATGATTTGTATCATTGGACATTAAAGGGGCTTGCCAAAGGCGATATTA
ATAATGTCGAGGTGACGAAGCATACATATCAGGAGGGGGCTTATGCTTTTCAGTGGAAAGGTTATTTCTGGATAATAGCT
GATCCTCATAAAGGATTGGCCGTGTATCGTTCGAAAGATGCGGAGAACTGGGAATATCAAGGAATTGTCATGTATGAACC
GGGTACTCGGTTCTTTGACAATACTCGCGCCCGGCATCCTAGTGTCATTATCAGAAATGATCGGGCATTCATTGTATACC
ATGTGCAACCCTTTTTAGGATATAATCCAAATACACACGAGGCTGGTGATGATGTTTACCAGAAACTGAGTTTCTTGCAG
ATGGCGGAATTGGAGTTTAAGGATGGAAAACTTATTTGTGACCGTAATAAGGTACTGTATAAATAA

Upstream 100 bases:

>100_bases
TTCCGGAGGTTCGCTATATAAGAATTAAGGTTCTCGATTCATGGAGTGGACAGGGATATGTACAGTTCTCGGAATTTACA
TTTTATAAAAGTGAATAAAA

Downstream 100 bases:

>100_bases
GATTGCAGGATATTGGATGTCATTATATTAGATATTATTTCTGTAAATGAGTAAATAGATTAAGTAAAGCGTGGAATATT
ACCACATATTTCACGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTSRRPFKDQASYVGTPVGVAVS
KDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAHMFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVV
DTPISIDATVVKNGDRWDMWYRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA
DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLGYNPNTHEAGDDVYQKLSFLQ
MAELEFKDGKLICDRNKVLYK

Sequences:

>Translated_341_residues
MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTSRRPFKDQASYVGTPVGVAVS
KDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAHMFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVV
DTPISIDATVVKNGDRWDMWYRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA
DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLGYNPNTHEAGDDVYQKLSFLQ
MAELEFKDGKLICDRNKVLYK
>Mature_341_residues
MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTSRRPFKDQASYVGTPVGVAVS
KDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAHMFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVV
DTPISIDATVVKNGDRWDMWYRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA
DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLGYNPNTHEAGDDVYQKLSFLQ
MAELEFKDGKLICDRNKVLYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39059; Mature: 39059

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTS
CHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEEEC
RRPFKDQASYVGTPVGVAVSKDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAH
CCCCCHHHHHCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCE
MFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVVDTPISIDATVVKNGDRWDMW
EEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCEECCCEEEEEEEEECCCEEEEE
YRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA
ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCEEEEEE
DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLG
CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEECHHHC
YNPNTHEAGDDVYQKLSFLQMAELEFKDGKLICDRNKVLYK
CCCCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCCCEECC
>Mature Secondary Structure
MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTS
CHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEEEC
RRPFKDQASYVGTPVGVAVSKDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAH
CCCCCHHHHHCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCE
MFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVVDTPISIDATVVKNGDRWDMW
EEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCEECCCEEEEEEEEECCCEEEEE
YRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA
ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCEEEEEE
DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLG
CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEECHHHC
YNPNTHEAGDDVYQKLSFLQMAELEFKDGKLICDRNKVLYK
CCCCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA