Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348312

Identifier: 29348312

GI number: 29348312

Start: 3632888

End: 3634093

Strand: Reverse

Name: 29348312

Synonym: BT_2903

Alternate gene names: NA

Gene position: 3634093-3632888 (Counterclockwise)

Preceding gene: 29348313

Following gene: 29348311

Centisome position: 58.05

GC content: 39.64

Gene sequence:

>1206_bases
ATGAATATTATGAAATCATATATAATGGTATTGCATCTTGTCTTGATATTCTTATCAATCGGATGCAAAGAAGACGATAA
CATAAGACCCTTTGGGAAAGATGTGGAAGCTGGTGCTCCTGGTGTAGTATCAGAGATTAAAGTGAAAAATATTCCGGGTG
GAGCGGTTATATCTTATCAACTACCAGATAATCCGGATATCATGTATGTGAGAGCCCGCTATAAAGTTGGTCAGGGGAAA
GAAATGGAGGCTAGAGCCTCAGTCTATGCAAATGAATTGACTGTCAATGGATTTGGAGATATGAATGAACATGAAGTTGA
ATTGTCTTGTGTGGACCGGATGGAAAATGAGGGGGCTACGACTGTTGCAGTAGTAACTCCATTGAAGCCTTCTGTTCTGA
CTACCTTCGAATCTTTGGAAGTGAATGCTACATTTGGTGGGGTATATGTAAATTTCAAAAATCCAGAAAAAGCGAGTCTT
TCTATTCATGTTGTAACTACTGATTCGTTAAATCAGCCTTATGAAGCTCATGTACAATATACACAGGCAGAGAAAGGACC
TTTTTATGTTCGTGGATTTAAAGCAGAAGAAAGGATGTTTGATATTTATGTAGTTGACCGTTGGGGGAATAGTTCGGATA
CTTTATATAATGTTTTAACTCCTTACGAGGAAACCCGATTAAATAAAAAACTTTTCTATCCATACATATTGCCGAATGAT
GTAGCATGTAATGCGTGGGGAGGAAACTTAGCTTATGCATGGAATGACGATTATACTCCTGCTCTTTTTGTACATAGTCC
GGGTGGAGATACATTCCCGATGTGGTTTACTTTTGATATGGGAGTCACTGCGAAACTGAGCAGGTATAAATTCTATCATC
TTTTTATGGAGGAACATGCTTTCCAGCGTGGTAATCTAAAGACTTGGGAAGTTTGGGGGAGAACAGATACGCCTCCTGCT
GACGGAAGTTGGGATGGATGGACTAAATTGATGGATTGTGAGTCTCATAAACCGTCAGGACTACCTGTTGGGCAGCATAC
AGCAGAAGACTGGGAATATTTGCAAGCAGGTGAGGATTTCGAATTTCCGGCAGAAGCTCCTCCAGTGAGATATATTCGTT
TCAAGGTTCTTGAAACATGGGGAGGTATGGACTTTATACACTTTACAGAATTTACTTTCTGGGGCAATGTAATATCTAAC
AATTAA

Upstream 100 bases:

>100_bases
ATTTTATTCGTAACTATGAAGATCGTGAAAATCTTTGGCCCTTAAAAGATTATGACTGCATTGTGAATCCTAAATTAGTT
CAAAATCCTGGTTGGTAAAA

Downstream 100 bases:

>100_bases
AAGAGCTGAATATGAAATATTTATATAAGATAGGATTAATACTTAGTGTTGTATTGACTGCCGGAGCTTGCTCCGGTCAG
TTGGACACGATCCAAGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNIMKSYIMVLHLVLIFLSIGCKEDDNIRPFGKDVEAGAPGVVSEIKVKNIPGGAVISYQLPDNPDIMYVRARYKVGQGK
EMEARASVYANELTVNGFGDMNEHEVELSCVDRMENEGATTVAVVTPLKPSVLTTFESLEVNATFGGVYVNFKNPEKASL
SIHVVTTDSLNQPYEAHVQYTQAEKGPFYVRGFKAEERMFDIYVVDRWGNSSDTLYNVLTPYEETRLNKKLFYPYILPND
VACNAWGGNLAYAWNDDYTPALFVHSPGGDTFPMWFTFDMGVTAKLSRYKFYHLFMEEHAFQRGNLKTWEVWGRTDTPPA
DGSWDGWTKLMDCESHKPSGLPVGQHTAEDWEYLQAGEDFEFPAEAPPVRYIRFKVLETWGGMDFIHFTEFTFWGNVISN
N

Sequences:

>Translated_401_residues
MNIMKSYIMVLHLVLIFLSIGCKEDDNIRPFGKDVEAGAPGVVSEIKVKNIPGGAVISYQLPDNPDIMYVRARYKVGQGK
EMEARASVYANELTVNGFGDMNEHEVELSCVDRMENEGATTVAVVTPLKPSVLTTFESLEVNATFGGVYVNFKNPEKASL
SIHVVTTDSLNQPYEAHVQYTQAEKGPFYVRGFKAEERMFDIYVVDRWGNSSDTLYNVLTPYEETRLNKKLFYPYILPND
VACNAWGGNLAYAWNDDYTPALFVHSPGGDTFPMWFTFDMGVTAKLSRYKFYHLFMEEHAFQRGNLKTWEVWGRTDTPPA
DGSWDGWTKLMDCESHKPSGLPVGQHTAEDWEYLQAGEDFEFPAEAPPVRYIRFKVLETWGGMDFIHFTEFTFWGNVISN
N
>Mature_401_residues
MNIMKSYIMVLHLVLIFLSIGCKEDDNIRPFGKDVEAGAPGVVSEIKVKNIPGGAVISYQLPDNPDIMYVRARYKVGQGK
EMEARASVYANELTVNGFGDMNEHEVELSCVDRMENEGATTVAVVTPLKPSVLTTFESLEVNATFGGVYVNFKNPEKASL
SIHVVTTDSLNQPYEAHVQYTQAEKGPFYVRGFKAEERMFDIYVVDRWGNSSDTLYNVLTPYEETRLNKKLFYPYILPND
VACNAWGGNLAYAWNDDYTPALFVHSPGGDTFPMWFTFDMGVTAKLSRYKFYHLFMEEHAFQRGNLKTWEVWGRTDTPPA
DGSWDGWTKLMDCESHKPSGLPVGQHTAEDWEYLQAGEDFEFPAEAPPVRYIRFKVLETWGGMDFIHFTEFTFWGNVISN
N

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45543; Mature: 45543

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMKSYIMVLHLVLIFLSIGCKEDDNIRPFGKDVEAGAPGVVSEIKVKNIPGGAVISYQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
LPDNPDIMYVRARYKVGQGKEMEARASVYANELTVNGFGDMNEHEVELSCVDRMENEGAT
CCCCCCEEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCCEEEEEEHHHHCCCCCE
TVAVVTPLKPSVLTTFESLEVNATFGGVYVNFKNPEKASLSIHVVTTDSLNQPYEAHVQY
EEEEEECCCCHHHEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCHHHEEEE
TQAEKGPFYVRGFKAEERMFDIYVVDRWGNSSDTLYNVLTPYEETRLNKKLFYPYILPND
EECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEECCCHHHHCCCCEEEEEEECCCC
VACNAWGGNLAYAWNDDYTPALFVHSPGGDTFPMWFTFDMGVTAKLSRYKFYHLFMEEHA
CEEECCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCEEEEHHEEEEEEEEHHHH
FQRGNLKTWEVWGRTDTPPADGSWDGWTKLMDCESHKPSGLPVGQHTAEDWEYLQAGEDF
HHCCCCEEEEEECCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCC
EFPAEAPPVRYIRFKVLETWGGMDFIHFTEFTFWGNVISNN
CCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEECEEECCC
>Mature Secondary Structure
MNIMKSYIMVLHLVLIFLSIGCKEDDNIRPFGKDVEAGAPGVVSEIKVKNIPGGAVISYQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
LPDNPDIMYVRARYKVGQGKEMEARASVYANELTVNGFGDMNEHEVELSCVDRMENEGAT
CCCCCCEEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCCEEEEEEHHHHCCCCCE
TVAVVTPLKPSVLTTFESLEVNATFGGVYVNFKNPEKASLSIHVVTTDSLNQPYEAHVQY
EEEEEECCCCHHHEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCHHHEEEE
TQAEKGPFYVRGFKAEERMFDIYVVDRWGNSSDTLYNVLTPYEETRLNKKLFYPYILPND
EECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEECCCHHHHCCCCEEEEEEECCCC
VACNAWGGNLAYAWNDDYTPALFVHSPGGDTFPMWFTFDMGVTAKLSRYKFYHLFMEEHA
CEEECCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCEEEEHHEEEEEEEEHHHH
FQRGNLKTWEVWGRTDTPPADGSWDGWTKLMDCESHKPSGLPVGQHTAEDWEYLQAGEDF
HHCCCCEEEEEECCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCC
EFPAEAPPVRYIRFKVLETWGGMDFIHFTEFTFWGNVISNN
CCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA