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The map label for this gene is yfbE [C]

Identifier: 29348294

GI number: 29348294

Start: 3604298

End: 3605407

Strand: Reverse

Name: yfbE [C]

Synonym: BT_2885

Alternate gene names: 29348294

Gene position: 3605407-3604298 (Counterclockwise)

Preceding gene: 29348295

Following gene: 29348293

Centisome position: 57.59

GC content: 40.63

Gene sequence:

>1110_bases
ATGAAGGAACAGCAGATTACAGTAACTTCCCCTTTATTACCATCTTTGGAGGAGTTAAATGTTTACTTGCAGGATATATG
GCAACGCAAATGGATTACTAATAATGGATATTATCATCAGATGCTGGAAGCCGCTTTGTGTGAATATCTGGGTGTACCTT
ATATCAGTCTGTTTACCAACGGGACTCTTCCTCTAACTGCGGCCTTACTGGCAATGCGTATTACAGGAGAGGTAATAACC
ACGCCTTTCAGTTTTGTTGCTACTACACATTCGTTGTGGTTGAATGGCATCAAACCGGTATTTGTAGACATAGACCCTGT
AACTTGTAATCTTGACCCTGATAAGATAGAGGTGGCTATAACTCCTAATACTACAGCCATTATGCCAGTGCATGTGTATG
GGTATCCTTGTGATACTAAGAGCATTCAGCAAATAGCAGATAAATACGGATTGAAGGTAATCTATGATGCTGCTCATGCA
TTTGGGGTGGAGAGAGAGGGAGAATCTATTTTGAATGCAGGTGATATGTCGACATTGAGCTTTCATGCGACGAAGACTTT
TAATACCATTGAGGGAGGTGCATTGGTACTTCACGATGAACATACTAAAAAGAGAGTTGATTACTTGAAAAATTTTGGTT
TTGTCGGTGAAACGGAGGTGGTTATTCCCGGAACTAATGGCAAGCTAGATGAAGTGCGGGCAGCTTACGGATTACTGAAC
TTAAAACAGGTAGATGCTGCCATTGAAGCACGCTGCCAGGCTACAACTAATTATAGAGAAGCCTTACGTAATGTTTCCGG
TATCACATTTATGGATGATATATCCGGAGTGAAGCATAATTATTCTTATTTCCCCATATTTGTGGATGAAGAACGATATG
GTATGAGCCGTGATGAACTCTATTTTAAGATGAAGGAATATAATGTATTAGGACGGCGGTATTTTTATCCGCTGATCAGT
ACTTTTTCTACTTATCGTGAATTAAAGTCAGCAAGGAAAGAAAATTTGCCTGTAGCCACAAAGATGGCGGAACAGGTTAT
TTGTTTGCCGATGCACCATGCATTGAGCGAAGATGATATGGAGCGGGTGTTACGGCTGATAAGAAAGTAG

Upstream 100 bases:

>100_bases
GCTGGGAGCTGCGATGGTAGAAGTGCCGGTAGGGTTTGTAGAGAGAATATGATACTGTTAGGTAATTACTACTAAGAAAA
AACAACTGAGATTACAAACC

Downstream 100 bases:

>100_bases
AATATGAAACTTGGTGTGATGCAACCTTACTTTATGCCTTATATCGGTTATTTCCAATTAATGAAAGCTGTAGATAAGTA
TGTGGTTTATGATGATGTTA

Product: nucleotide sugar transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKEQQITVTSPLLPSLEELNVYLQDIWQRKWITNNGYYHQMLEAALCEYLGVPYISLFTNGTLPLTAALLAMRITGEVIT
TPFSFVATTHSLWLNGIKPVFVDIDPVTCNLDPDKIEVAITPNTTAIMPVHVYGYPCDTKSIQQIADKYGLKVIYDAAHA
FGVEREGESILNAGDMSTLSFHATKTFNTIEGGALVLHDEHTKKRVDYLKNFGFVGETEVVIPGTNGKLDEVRAAYGLLN
LKQVDAAIEARCQATTNYREALRNVSGITFMDDISGVKHNYSYFPIFVDEERYGMSRDELYFKMKEYNVLGRRYFYPLIS
TFSTYRELKSARKENLPVATKMAEQVICLPMHHALSEDDMERVLRLIRK

Sequences:

>Translated_369_residues
MKEQQITVTSPLLPSLEELNVYLQDIWQRKWITNNGYYHQMLEAALCEYLGVPYISLFTNGTLPLTAALLAMRITGEVIT
TPFSFVATTHSLWLNGIKPVFVDIDPVTCNLDPDKIEVAITPNTTAIMPVHVYGYPCDTKSIQQIADKYGLKVIYDAAHA
FGVEREGESILNAGDMSTLSFHATKTFNTIEGGALVLHDEHTKKRVDYLKNFGFVGETEVVIPGTNGKLDEVRAAYGLLN
LKQVDAAIEARCQATTNYREALRNVSGITFMDDISGVKHNYSYFPIFVDEERYGMSRDELYFKMKEYNVLGRRYFYPLIS
TFSTYRELKSARKENLPVATKMAEQVICLPMHHALSEDDMERVLRLIRK
>Mature_369_residues
MKEQQITVTSPLLPSLEELNVYLQDIWQRKWITNNGYYHQMLEAALCEYLGVPYISLFTNGTLPLTAALLAMRITGEVIT
TPFSFVATTHSLWLNGIKPVFVDIDPVTCNLDPDKIEVAITPNTTAIMPVHVYGYPCDTKSIQQIADKYGLKVIYDAAHA
FGVEREGESILNAGDMSTLSFHATKTFNTIEGGALVLHDEHTKKRVDYLKNFGFVGETEVVIPGTNGKLDEVRAAYGLLN
LKQVDAAIEARCQATTNYREALRNVSGITFMDDISGVKHNYSYFPIFVDEERYGMSRDELYFKMKEYNVLGRRYFYPLIS
TFSTYRELKSARKENLPVATKMAEQVICLPMHHALSEDDMERVLRLIRK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=376, Percent_Identity=30.0531914893617, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI2367285, Length=253, Percent_Identity=29.6442687747036, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41840; Mature: 41840

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQQITVTSPLLPSLEELNVYLQDIWQRKWITNNGYYHQMLEAALCEYLGVPYISLFTN
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
GTLPLTAALLAMRITGEVITTPFSFVATTHSLWLNGIKPVFVDIDPVTCNLDPDKIEVAI
CCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCEEEEEE
TPNTTAIMPVHVYGYPCDTKSIQQIADKYGLKVIYDAAHAFGVEREGESILNAGDMSTLS
CCCCEEEEEEEEEECCCCHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHCCCCCCEEE
FHATKTFNTIEGGALVLHDEHTKKRVDYLKNFGFVGETEVVIPGTNGKLDEVRAAYGLLN
EEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH
LKQVDAAIEARCQATTNYREALRNVSGITFMDDISGVKHNYSYFPIFVDEERYGMSRDEL
HHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHCCCCCCCEEEEEEECCHHHCCCHHHH
YFKMKEYNVLGRRYFYPLISTFSTYRELKSARKENLPVATKMAEQVICLPMHHALSEDDM
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
ERVLRLIRK
HHHHHHHCC
>Mature Secondary Structure
MKEQQITVTSPLLPSLEELNVYLQDIWQRKWITNNGYYHQMLEAALCEYLGVPYISLFTN
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
GTLPLTAALLAMRITGEVITTPFSFVATTHSLWLNGIKPVFVDIDPVTCNLDPDKIEVAI
CCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCEEEEEE
TPNTTAIMPVHVYGYPCDTKSIQQIADKYGLKVIYDAAHAFGVEREGESILNAGDMSTLS
CCCCEEEEEEEEEECCCCHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHCCCCCCEEE
FHATKTFNTIEGGALVLHDEHTKKRVDYLKNFGFVGETEVVIPGTNGKLDEVRAAYGLLN
EEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH
LKQVDAAIEARCQATTNYREALRNVSGITFMDDISGVKHNYSYFPIFVDEERYGMSRDEL
HHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHCCCCCCCEEEEEEECCHHHCCCHHHH
YFKMKEYNVLGRRYFYPLISTFSTYRELKSARKENLPVATKMAEQVICLPMHHALSEDDM
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
ERVLRLIRK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]