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The map label for this gene is 29348295

Identifier: 29348295

GI number: 29348295

Start: 3605456

End: 3605962

Strand: Reverse

Name: 29348295

Synonym: BT_2886

Alternate gene names: NA

Gene position: 3605962-3605456 (Counterclockwise)

Preceding gene: 29348296

Following gene: 29348294

Centisome position: 57.6

GC content: 47.73

Gene sequence:

>507_bases
ATGGATGAAAAAAAGTGTTGGTTGGTTGTTTGTGTGCAGAGTAACAGGGAGAAGAAAACCTACGAACGTCTGTCGGCATT
GGGATTTGAATCTTTTCTTCCGTTACAGGAAGAAACACGTCGTTGGAGTGACCGAAGCAAGAAAGTGCAGCGGGTCGTGA
TTCCTATGGTTGTTTTTGCCCGGATAGCTCCTTCCGAACGTATTTCTGTGCTTCGTCTTCCCTCTGTAAGCCGCTTTATG
GTATTGCGCGGAGAAAGTGCTCCGGCAATCATCCCGGATGCACAAATGGAACGTTTCCGCTTTATGCTCGATTATTCGGA
AGAAGCGGTTGAGATGTGTTCGGAGCGTATCCAGCCGGGCGAACAGGTAAAAGTTATCAAGGGGCCGTTGACAGGATTAA
CAGGGGAGCTGATAACAATGGATGGAAAAAGTAAGGTAGCCGTCAGGATTAATATGCTGGGAGCTGCGATGGTAGAAGTG
CCGGTAGGGTTTGTAGAGAGAATATGA

Upstream 100 bases:

>100_bases
AAATTTTTCAGGTAGCCGTCATGTATGTGACTGGCGGGAGCGGAGCGCGCTTGGAGGGTACCTTATTGTGACTTTAAATG
ATAGAATTGGAGGAGTTATT

Downstream 100 bases:

>100_bases
TACTGTTAGGTAATTACTACTAAGAAAAAACAACTGAGATTACAAACCATGAAGGAACAGCAGATTACAGTAACTTCCCC
TTTATTACCATCTTTGGAGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NusG Antitermination Factor; Transcription Antiterminator; Transcription Antitermination Protein NusG; NGN Domain Protein; LPS Biosynthesis Related Transcriptional Regulatory Protein; Nusg Antitermination Factor; Transcriptional Antiterminator; Ngn DomaiN-Containing Protein; Transcription Termination/Antitermination Factor NusG; Transcriptional Regulatory Protein; LPS-Related Regulatory Protein; NusG/RfaH Family Transcriptional Regulator

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MDEKKCWLVVCVQSNREKKTYERLSALGFESFLPLQEETRRWSDRSKKVQRVVIPMVVFARIAPSERISVLRLPSVSRFM
VLRGESAPAIIPDAQMERFRFMLDYSEEAVEMCSERIQPGEQVKVIKGPLTGLTGELITMDGKSKVAVRINMLGAAMVEV
PVGFVERI

Sequences:

>Translated_168_residues
MDEKKCWLVVCVQSNREKKTYERLSALGFESFLPLQEETRRWSDRSKKVQRVVIPMVVFARIAPSERISVLRLPSVSRFM
VLRGESAPAIIPDAQMERFRFMLDYSEEAVEMCSERIQPGEQVKVIKGPLTGLTGELITMDGKSKVAVRINMLGAAMVEV
PVGFVERI
>Mature_168_residues
MDEKKCWLVVCVQSNREKKTYERLSALGFESFLPLQEETRRWSDRSKKVQRVVIPMVVFARIAPSERISVLRLPSVSRFM
VLRGESAPAIIPDAQMERFRFMLDYSEEAVEMCSERIQPGEQVKVIKGPLTGLTGELITMDGKSKVAVRINMLGAAMVEV
PVGFVERI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19107; Mature: 19107

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKKCWLVVCVQSNREKKTYERLSALGFESFLPLQEETRRWSDRSKKVQRVVIPMVVFA
CCCCCEEEEEEECCCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIAPSERISVLRLPSVSRFMVLRGESAPAIIPDAQMERFRFMLDYSEEAVEMCSERIQPG
HCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
EQVKVIKGPLTGLTGELITMDGKSKVAVRINMLGAAMVEVPVGFVERI
CEEEEEECCCCCCCCCEEEECCCCEEEEEEEEHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MDEKKCWLVVCVQSNREKKTYERLSALGFESFLPLQEETRRWSDRSKKVQRVVIPMVVFA
CCCCCEEEEEEECCCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIAPSERISVLRLPSVSRFMVLRGESAPAIIPDAQMERFRFMLDYSEEAVEMCSERIQPG
HCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
EQVKVIKGPLTGLTGELITMDGKSKVAVRINMLGAAMVEVPVGFVERI
CEEEEEECCCCCCCCCEEEECCCCEEEEEEEEHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA