| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348293
Identifier: 29348293
GI number: 29348293
Start: 3603599
End: 3604294
Strand: Reverse
Name: 29348293
Synonym: BT_2884
Alternate gene names: NA
Gene position: 3604294-3603599 (Counterclockwise)
Preceding gene: 29348294
Following gene: 29348292
Centisome position: 57.57
GC content: 32.47
Gene sequence:
>696_bases ATGAAACTTGGTGTGATGCAACCTTACTTTATGCCTTATATCGGTTATTTCCAATTAATGAAAGCTGTAGATAAGTATGT GGTTTATGATGATGTTAATTACATTAAAGGCGGCTGGGTTAACCGTAATCATATACTGATCAATGGAGAGAAAGAAATGT TCACTGTGACTTTGAAGAAAGCGAGTCAGAATAAGTTATTCAATGAAATAGTGATAGGCGATGATTTTAAGAAACTTATG AAAACACTGCAACTGAACTATTCCAAAGCTGTTAACTTTGATCAGACGATGACTCTGATGAAAAGAATCATTTCTTTCTC AGATAAGAGGCTTGCGGCATTTATAGCAAATAGTTTTCGGGAAATATTCAGTTATTTGTCAATAGATACGGAGATATTGA TGTCCTCAGATATTCCGAAAGATAATTCTCTGAGAGGAAAAGATAAAATCTTGCAGATATGTGAAATATTGGGTGCTGAT ACTTATTATAATGCTATCGGTGGGCAGAATCTTTATGATAAAAAGGAATTTAGTGAACATGGAATTGTACTGAATTTTGT AGATACAATCCCAAAAGTATATTCTCAATTGCGTACTAAGGAATTTGTGCCTTATTTGTCGATGATAGATGTATTAATGA ATAATACCAAAGATGAAGTCAATGATTTATTGGATTCTTTTTGTGTAAGATATTGA
Upstream 100 bases:
>100_bases AGCCACAAAGATGGCGGAACAGGTTATTTGTTTGCCGATGCACCATGCATTGAGCGAAGATGATATGGAGCGGGTGTTAC GGCTGATAAGAAAGTAGAAT
Downstream 100 bases:
>100_bases AATTGCTTAGATATGAAATCTTTTAATATTGTAGTGTGTGCGTCTGGTGGTGGAGGAAATTTTCGTTCTTTGATAAAATA TCAATGTGATTATGGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKKASQNKLFNEIVIGDDFKKLM KTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFREIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGAD TYYNAIGGQNLYDKKEFSEHGIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY
Sequences:
>Translated_231_residues MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKKASQNKLFNEIVIGDDFKKLM KTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFREIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGAD TYYNAIGGQNLYDKKEFSEHGIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY >Mature_231_residues MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKKASQNKLFNEIVIGDDFKKLM KTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFREIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGAD TYYNAIGGQNLYDKKEFSEHGIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014985 [H]
Pfam domain/function: PF08889 WbqC [H]
EC number: NA
Molecular weight: Translated: 26851; Mature: 26851
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCEEEEEEEHH ASQNKLFNEIVIGDDFKKLMKTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFR HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGADTYYNAIGGQNLYDKKEFSEH HHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHC GIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCEEEEEEEHH ASQNKLFNEIVIGDDFKKLMKTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFR HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGADTYYNAIGGQNLYDKKEFSEH HHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHC GIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]