Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348293

Identifier: 29348293

GI number: 29348293

Start: 3603599

End: 3604294

Strand: Reverse

Name: 29348293

Synonym: BT_2884

Alternate gene names: NA

Gene position: 3604294-3603599 (Counterclockwise)

Preceding gene: 29348294

Following gene: 29348292

Centisome position: 57.57

GC content: 32.47

Gene sequence:

>696_bases
ATGAAACTTGGTGTGATGCAACCTTACTTTATGCCTTATATCGGTTATTTCCAATTAATGAAAGCTGTAGATAAGTATGT
GGTTTATGATGATGTTAATTACATTAAAGGCGGCTGGGTTAACCGTAATCATATACTGATCAATGGAGAGAAAGAAATGT
TCACTGTGACTTTGAAGAAAGCGAGTCAGAATAAGTTATTCAATGAAATAGTGATAGGCGATGATTTTAAGAAACTTATG
AAAACACTGCAACTGAACTATTCCAAAGCTGTTAACTTTGATCAGACGATGACTCTGATGAAAAGAATCATTTCTTTCTC
AGATAAGAGGCTTGCGGCATTTATAGCAAATAGTTTTCGGGAAATATTCAGTTATTTGTCAATAGATACGGAGATATTGA
TGTCCTCAGATATTCCGAAAGATAATTCTCTGAGAGGAAAAGATAAAATCTTGCAGATATGTGAAATATTGGGTGCTGAT
ACTTATTATAATGCTATCGGTGGGCAGAATCTTTATGATAAAAAGGAATTTAGTGAACATGGAATTGTACTGAATTTTGT
AGATACAATCCCAAAAGTATATTCTCAATTGCGTACTAAGGAATTTGTGCCTTATTTGTCGATGATAGATGTATTAATGA
ATAATACCAAAGATGAAGTCAATGATTTATTGGATTCTTTTTGTGTAAGATATTGA

Upstream 100 bases:

>100_bases
AGCCACAAAGATGGCGGAACAGGTTATTTGTTTGCCGATGCACCATGCATTGAGCGAAGATGATATGGAGCGGGTGTTAC
GGCTGATAAGAAAGTAGAAT

Downstream 100 bases:

>100_bases
AATTGCTTAGATATGAAATCTTTTAATATTGTAGTGTGTGCGTCTGGTGGTGGAGGAAATTTTCGTTCTTTGATAAAATA
TCAATGTGATTATGGTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKKASQNKLFNEIVIGDDFKKLM
KTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFREIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGAD
TYYNAIGGQNLYDKKEFSEHGIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY

Sequences:

>Translated_231_residues
MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKKASQNKLFNEIVIGDDFKKLM
KTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFREIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGAD
TYYNAIGGQNLYDKKEFSEHGIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY
>Mature_231_residues
MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKKASQNKLFNEIVIGDDFKKLM
KTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFREIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGAD
TYYNAIGGQNLYDKKEFSEHGIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014985 [H]

Pfam domain/function: PF08889 WbqC [H]

EC number: NA

Molecular weight: Translated: 26851; Mature: 26851

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCEEEEEEEHH
ASQNKLFNEIVIGDDFKKLMKTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFR
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGADTYYNAIGGQNLYDKKEFSEH
HHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHC
GIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLGVMQPYFMPYIGYFQLMKAVDKYVVYDDVNYIKGGWVNRNHILINGEKEMFTVTLKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCEEEEEEEHH
ASQNKLFNEIVIGDDFKKLMKTLQLNYSKAVNFDQTMTLMKRIISFSDKRLAAFIANSFR
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EIFSYLSIDTEILMSSDIPKDNSLRGKDKILQICEILGADTYYNAIGGQNLYDKKEFSEH
HHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHC
GIVLNFVDTIPKVYSQLRTKEFVPYLSMIDVLMNNTKDEVNDLLDSFCVRY
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]