| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348162
Identifier: 29348162
GI number: 29348162
Start: 3413478
End: 3414068
Strand: Reverse
Name: 29348162
Synonym: BT_2753
Alternate gene names: NA
Gene position: 3414068-3413478 (Counterclockwise)
Preceding gene: 29348163
Following gene: 29348161
Centisome position: 54.53
GC content: 39.76
Gene sequence:
>591_bases ATGAAAAAGATTTTTGGTGCTTTAATGATTGCCGTATGTATCGGTATGGCGATGCCTGCCCAGGCACAATTACATTTTGG TGTAAAGGGTGGTTTAAACTTGTCTAAAGCAAGCTTTTCTGATGTGAAAGAAAACTTTAAAAAGGATAATTTTACAGGTT TCTTTATCGGTCCGATGGCGGAATTCAATATTCCGGTTGTGGGATTAGGAGTCGATGCGTCTTTGCTTTTTGCTCAAAGA GGTATAAAAATCTCTGATGGAGGTGAAGAAGTTACTGTCAAGCAGAATGGCTTGGATATTCCGGTCAATTTGAAATATAA CATCGGTCTGGGAAGTCTGGTAGGTCTTTATGTGGCTGCCGGTCCTGATTTTTACTTTGATTTTGCCGGTAATAAGACAA TAGACGGAGTAAAAACCGATAAAAAGAAAGCTGAAGTCGGTATCAATGTCGGTGCAGGTGTGAAGTTGCTGAATCATCTG CAAGTAGGAGCTAATTATAATATTCCGTTGGGCAAGACTGCCAGCTTTGAAGACATTGAAGGCTCATACAAAACCAAGAC TTGGCAAGTATCCGTTGCTTATATTTTCTAA
Upstream 100 bases:
>100_bases TTGCTGGCAAATCGGGAGTTGATTTCGAACAAAGAGCAATAATTTGTGTTTATTTATTATAAATATATATCTTTGTCCCG AATTATAAACACGTAGATTT
Downstream 100 bases:
>100_bases GCCATCCGTTACATTCAATCATACAAAGAAAGAGCTTCCGATAAAGGAGGCTCTTTTTTTATTCAAGGTATTTTGTTTAA GGTACTGGTCTGTAAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKKIFGALMIAVCIGMAMPAQAQLHFGVKGGLNLSKASFSDVKENFKKDNFTGFFIGPMAEFNIPVVGLGVDASLLFAQR GIKISDGGEEVTVKQNGLDIPVNLKYNIGLGSLVGLYVAAGPDFYFDFAGNKTIDGVKTDKKKAEVGINVGAGVKLLNHL QVGANYNIPLGKTASFEDIEGSYKTKTWQVSVAYIF
Sequences:
>Translated_196_residues MKKIFGALMIAVCIGMAMPAQAQLHFGVKGGLNLSKASFSDVKENFKKDNFTGFFIGPMAEFNIPVVGLGVDASLLFAQR GIKISDGGEEVTVKQNGLDIPVNLKYNIGLGSLVGLYVAAGPDFYFDFAGNKTIDGVKTDKKKAEVGINVGAGVKLLNHL QVGANYNIPLGKTASFEDIEGSYKTKTWQVSVAYIF >Mature_196_residues MKKIFGALMIAVCIGMAMPAQAQLHFGVKGGLNLSKASFSDVKENFKKDNFTGFFIGPMAEFNIPVVGLGVDASLLFAQR GIKISDGGEEVTVKQNGLDIPVNLKYNIGLGSLVGLYVAAGPDFYFDFAGNKTIDGVKTDKKKAEVGINVGAGVKLLNHL QVGANYNIPLGKTASFEDIEGSYKTKTWQVSVAYIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20950; Mature: 20950
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFGALMIAVCIGMAMPAQAQLHFGVKGGLNLSKASFSDVKENFKKDNFTGFFIGPMA CHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEECCCC EFNIPVVGLGVDASLLFAQRGIKISDGGEEVTVKQNGLDIPVNLKYNIGLGSLVGLYVAA CCCCCEEEECCCCEEEHHHCCCEEECCCCEEEEECCCCEEEEEEEEECCCHHHEEEEEEC GPDFYFDFAGNKTIDGVKTDKKKAEVGINVGAGVKLLNHLQVGANYNIPLGKTASFEDIE CCCEEEECCCCCEECCCCCCCCHHEEEEECCCHHHEEHHEEECCCCCCCCCCCCCCCCCC GSYKTKTWQVSVAYIF CCCCCEEEEEEEEEEC >Mature Secondary Structure MKKIFGALMIAVCIGMAMPAQAQLHFGVKGGLNLSKASFSDVKENFKKDNFTGFFIGPMA CHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEECCCC EFNIPVVGLGVDASLLFAQRGIKISDGGEEVTVKQNGLDIPVNLKYNIGLGSLVGLYVAA CCCCCEEEECCCCEEEHHHCCCEEECCCCEEEEECCCCEEEEEEEEECCCHHHEEEEEEC GPDFYFDFAGNKTIDGVKTDKKKAEVGINVGAGVKLLNHLQVGANYNIPLGKTASFEDIE CCCEEEECCCCCEECCCCCCCCHHEEEEECCCHHHEEHHEEECCCCCCCCCCCCCCCCCC GSYKTKTWQVSVAYIF CCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA