| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348163
Identifier: 29348163
GI number: 29348163
Start: 3414127
End: 3415107
Strand: Reverse
Name: 29348163
Synonym: BT_2754
Alternate gene names: NA
Gene position: 3415107-3414127 (Counterclockwise)
Preceding gene: 29348164
Following gene: 29348162
Centisome position: 54.55
GC content: 44.75
Gene sequence:
>981_bases ATGAAAAACAAACCTTTTGAGAATTTTGACTTTATAGACTTCTGGGATGATGATGAATATGCTATGAATGAATATATTGG CGCACCTCCTACAGAAGAGATGATAGAAGAAACAGAACGTGAACTGGGATACAAACTCCCCGAATCTTATATTTGGCTGA TGAAGCAGCATAACGGTGGAATACCTTTCAATGTTTGTTTTCCTTGCGACGAACCTACCAGTTGGGCGGACGACCATGTG GCTATCACTGGCATTATGGGAGTCGATAAGGATAAGATTTATTCTCTTTGCGGACAGCTCGGCAGCCGTTTCATGATTGA AGAATGGGGGTATCCGGACATTGGAGTGGCTATCTGCGACTGTCCTTCTGTGGGACATGATATGATTTTCCTTGATTATC GGGAGTGTGGTCCACAGGGCGAACCGAAAGTCGTTCATGTCGATCAGGAAGATGATTATTATGTTACTTTCCTTGCCGAT AACTTTGAAGAATTTATTCGGGGACTTGTCAACGAAGAAGTCTTTGATACGTCGGAAGAAGATGAAAGAATGGAGCTGGA AAAAGTTCGGAACGCAGCTTTCTCACCGCTCTTGTCCGATTTGTGCGCAAAGTGTGATCATCCCGTGGATACGGAGCGAT GGATTCGGAAGATATCGGAAGAGATAGTAACCGATAAAGGATTCTTTGCGCTTCATGCCGACGAACGTTCTTATCTGCTT TACGACATCCAGTTGTGGCTTTACACCAACGTTTATCCCGATACGACGGAAGAAGATTACCTGTCTGCTTATAAAAAGAT AATAGCGCTGGACGGTGAGTTCAGTACGGGAGGATATGCTTCGGACTTTGTTACCGATTGGCTGACACGACGCAAGGAGA GCGGTATGGTTACGTGTAATGACGGTATTCTTTCGATGGCAGCGGGAACTAAGGAGGCCTTGCTGGCAAATCGGGAGTTG ATTTCGAACAAAGAGCAATAA
Upstream 100 bases:
>100_bases TAAAGGAAATAAATTGATAATGTCTGTTTTTTAGTATATTCGTAAAAAGTAGTGTACATACAAAGCAAAACTAAAAGAAT ACAAATTAAAAACAGCGATT
Downstream 100 bases:
>100_bases TTTGTGTTTATTTATTATAAATATATATCTTTGTCCCGAATTATAAACACGTAGATTTATGAAAAAGATTTTTGGTGCTT TAATGATTGCCGTATGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKNKPFENFDFIDFWDDDEYAMNEYIGAPPTEEMIEETERELGYKLPESYIWLMKQHNGGIPFNVCFPCDEPTSWADDHV AITGIMGVDKDKIYSLCGQLGSRFMIEEWGYPDIGVAICDCPSVGHDMIFLDYRECGPQGEPKVVHVDQEDDYYVTFLAD NFEEFIRGLVNEEVFDTSEEDERMELEKVRNAAFSPLLSDLCAKCDHPVDTERWIRKISEEIVTDKGFFALHADERSYLL YDIQLWLYTNVYPDTTEEDYLSAYKKIIALDGEFSTGGYASDFVTDWLTRRKESGMVTCNDGILSMAAGTKEALLANREL ISNKEQ
Sequences:
>Translated_326_residues MKNKPFENFDFIDFWDDDEYAMNEYIGAPPTEEMIEETERELGYKLPESYIWLMKQHNGGIPFNVCFPCDEPTSWADDHV AITGIMGVDKDKIYSLCGQLGSRFMIEEWGYPDIGVAICDCPSVGHDMIFLDYRECGPQGEPKVVHVDQEDDYYVTFLAD NFEEFIRGLVNEEVFDTSEEDERMELEKVRNAAFSPLLSDLCAKCDHPVDTERWIRKISEEIVTDKGFFALHADERSYLL YDIQLWLYTNVYPDTTEEDYLSAYKKIIALDGEFSTGGYASDFVTDWLTRRKESGMVTCNDGILSMAAGTKEALLANREL ISNKEQ >Mature_326_residues MKNKPFENFDFIDFWDDDEYAMNEYIGAPPTEEMIEETERELGYKLPESYIWLMKQHNGGIPFNVCFPCDEPTSWADDHV AITGIMGVDKDKIYSLCGQLGSRFMIEEWGYPDIGVAICDCPSVGHDMIFLDYRECGPQGEPKVVHVDQEDDYYVTFLAD NFEEFIRGLVNEEVFDTSEEDERMELEKVRNAAFSPLLSDLCAKCDHPVDTERWIRKISEEIVTDKGFFALHADERSYLL YDIQLWLYTNVYPDTTEEDYLSAYKKIIALDGEFSTGGYASDFVTDWLTRRKESGMVTCNDGILSMAAGTKEALLANREL ISNKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37517; Mature: 37517
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKPFENFDFIDFWDDDEYAMNEYIGAPPTEEMIEETERELGYKLPESYIWLMKQHNGG CCCCCCCCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHEEEEEECCCC IPFNVCFPCDEPTSWADDHVAITGIMGVDKDKIYSLCGQLGSRFMIEEWGYPDIGVAICD CCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEHHCCCCCCCEEEEC CPSVGHDMIFLDYRECGPQGEPKVVHVDQEDDYYVTFLADNFEEFIRGLVNEEVFDTSEE CCCCCCCEEEEEHHHCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHCHHHCCCCCH DERMELEKVRNAAFSPLLSDLCAKCDHPVDTERWIRKISEEIVTDKGFFALHADERSYLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEE YDIQLWLYTNVYPDTTEEDYLSAYKKIIALDGEFSTGGYASDFVTDWLTRRKESGMVTCN EEEEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEC DGILSMAAGTKEALLANRELISNKEQ CCEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNKPFENFDFIDFWDDDEYAMNEYIGAPPTEEMIEETERELGYKLPESYIWLMKQHNGG CCCCCCCCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHEEEEEECCCC IPFNVCFPCDEPTSWADDHVAITGIMGVDKDKIYSLCGQLGSRFMIEEWGYPDIGVAICD CCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEHHCCCCCCCEEEEC CPSVGHDMIFLDYRECGPQGEPKVVHVDQEDDYYVTFLADNFEEFIRGLVNEEVFDTSEE CCCCCCCEEEEEHHHCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHCHHHCCCCCH DERMELEKVRNAAFSPLLSDLCAKCDHPVDTERWIRKISEEIVTDKGFFALHADERSYLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEE YDIQLWLYTNVYPDTTEEDYLSAYKKIIALDGEFSTGGYASDFVTDWLTRRKESGMVTCN EEEEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEC DGILSMAAGTKEALLANRELISNKEQ CCEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA