Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348160

Identifier: 29348160

GI number: 29348160

Start: 3408968

End: 3410764

Strand: Reverse

Name: 29348160

Synonym: BT_2751

Alternate gene names: NA

Gene position: 3410764-3408968 (Counterclockwise)

Preceding gene: 29348161

Following gene: 29348159

Centisome position: 54.48

GC content: 46.97

Gene sequence:

>1797_bases
ATGAAACGACTTACGATTTATTGCTTAACATGTCTTATTGGTGTGAGTCCTCTTTTTGCCCAGCAAGGAGTGACTCAGTG
TGGAACCCCTACGGGGCAACCGAAATTTCCAATAGAAACTTATCAGGAACTGCCCGACCCTTCCTCCCCCTCTGATAAAG
ACTGGGCAGCAGTTACCAACCCTCAGATTTCCTGGGGAACTATTGACACCCGCTATGCGAAGCATCGGCTTCCTCAGCTG
AAAAAACAGCAGCTTACCACTTTAAAAGGCTGGCGTGGCGAACGTATAAATGCGCAGGCTGTTGTCTGGACCGGCACTGA
GGTGAAAGATCTGAACTTCAGCTTTACCGATTTTAAAGATAAAAAAGGAAATAGCCTTTCGGATGAGGCGTTTAAAGCCG
GTTTCATCCGTTATGTAATGACCGATGAACTGAATAAAGATGGCAGAGGCGCATGCGGTCACCGTCAAGCAGTGGATTAC
GATTCGTTGTTGGTAGCCGACCCGATTGATACGAACTTGAAATCAATGTCTGTTCCGGCACGTACTGTTCAACCTATCTG
GGTGCAATGCTGGATTCCTCAATCGGCTACTCCCGGAACCTACAAGGGTGCCTTGCTGATAAAAGACGGTTCCCGTCTGT
TGCAGCAGCTTAATCTCGAAATCCTTGTTTCTTCCCGTGAACTTCCTGCACCGTCCGAATGGGCTTATCATCTGGATTTG
TGGCAGAGCCCGTTTGCCGTAGCCCGTTATTATCAGGTTCCCTTGTGGAGTCAGGAGCATCTGGATGCTATGCGCCCGCT
GATGAAAATGCTGGCGGATGCCGGTCAAAAGATTATCACAGCCACTTTGACACATAAACCTTGGAACGGTCAGACTGAAG
ATTATTTCGAGACAATGGTAACATGGATGAAACGTGCCGACGGCACTTGGGCTTTTGACTATACGGTTTTTGATCGCTGG
GTAGAGTTTATGATGAGTGTCGGTATCAATCAGCAGATTAACTGTTACTCTATGGTTCCCTGGGAATTATCTTTCCAGTA
TTTTGATCAGGCAACAAATTCATTGAAATTTGTGAGGACAGCACCGGGAGAACCTGCTTATGAAGAAATGTGGGTTGCGA
TGCTTACTTCTTTTTCCAAGCATCTGAGAGAAAAGGGATGGTTTGATATTTGTGCAATTGCGATGGACGAGCGTCCGATG
GATGTCATGCAGAAAACGTTGAAAGTAATCCGCAAGGCAGATCCGGAGTTTAAAGTTTCACTGGCCGGTAATTATCATGC
TGAGATAGAGCCGGACTTGTACGATTATTGCATTGTTATCGGACAGAACTTCCCGGAAGAAGTACGTCTCCGCCGTGCGG
CCGAGAATAAACGTACCACCTATTATACTTGTTGTACGGAAGCACATCCCAATACATTCACTTTCTCCGATCCTGCTGAG
GCTGCATGGATGAGTTTCTATTCTTCGAAGAAGCATCTGGACGGCTATCTGCGTTGGGCATACAATAGCTGGCCTTTGGA
GCCGTTGCTCGATTCACGTTTCCGCACGTGGGCGGCTGGAGATACTTATCTTGTGTATCCGGGAGCCCGTAGCTGTATCC
GTTTCGAACGTCTGATCGAAGGTATTCAGGCACATGAGAAAATAACGATTCTTCGTCAGGAATTTGAGAAGAAGGGAAAT
AAAGCCGGATTAAAGAAGATAGAGAAAATGCTGGCCCCGTTCAATTTGGGTAATATGCCGGAAATACCAGCAGCCGTTAC
CGTAAACCGGGCCAATCAGATACTTCATTCGTTTTGA

Upstream 100 bases:

>100_bases
CGCTATAAATCCTTGATTGTCTATTATGATGTAGACCCCATGTAGCACTCGATACAGACCTAATATTTTTCTTATAATAA
CCTTTATAAATTAACTAACC

Downstream 100 bases:

>100_bases
TAATAGAAACGAATGAAGCCTGTCAATTATTAAACGTAAATTATGAAGAAAATATTATTTGTCTGCCTCGGAAATATCTG
CCGTAGCTCTACGGCGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTNPQISWGTIDTRYAKHRLPQL
KKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKDKKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDY
DSLLVADPIDTNLKSMSVPARTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL
WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMVTWMKRADGTWAFDYTVFDRW
VEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRTAPGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPM
DVMQKTLKVIRKADPEFKVSLAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE
AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIEGIQAHEKITILRQEFEKKGN
KAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF

Sequences:

>Translated_598_residues
MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTNPQISWGTIDTRYAKHRLPQL
KKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKDKKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDY
DSLLVADPIDTNLKSMSVPARTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL
WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMVTWMKRADGTWAFDYTVFDRW
VEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRTAPGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPM
DVMQKTLKVIRKADPEFKVSLAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE
AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIEGIQAHEKITILRQEFEKKGN
KAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF
>Mature_598_residues
MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTNPQISWGTIDTRYAKHRLPQL
KKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKDKKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDY
DSLLVADPIDTNLKSMSVPARTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL
WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMVTWMKRADGTWAFDYTVFDRW
VEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRTAPGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPM
DVMQKTLKVIRKADPEFKVSLAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE
AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIEGIQAHEKITILRQEFEKKGN
KAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68606; Mature: 68606

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTN
CCCCHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECC
PQISWGTIDTRYAKHRLPQLKKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKD
CCEECCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCEECCCCC
KKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDYDSLLVADPIDTNLKSMSVPA
CCCCCCCHHHHHHHHHHEEEHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCC
RTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL
CCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCEEEEEECCCCCCCCCCEEEEHH
WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMV
HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHH
TWMKRADGTWAFDYTVFDRWVEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRT
HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEE
APGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPMDVMQKTLKVIRKADPEFKVS
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
LAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE
ECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCHH
AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIE
HHHHHHHHCHHHHCCEEEEECCCCCCCHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHH
GIQAHEKITILRQEFEKKGNKAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHCC
>Mature Secondary Structure
MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTN
CCCCHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECC
PQISWGTIDTRYAKHRLPQLKKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKD
CCEECCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCEECCCCC
KKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDYDSLLVADPIDTNLKSMSVPA
CCCCCCCHHHHHHHHHHEEEHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCC
RTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL
CCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCEEEEEECCCCCCCCCCEEEEHH
WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMV
HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHH
TWMKRADGTWAFDYTVFDRWVEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRT
HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEE
APGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPMDVMQKTLKVIRKADPEFKVS
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
LAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE
ECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCHH
AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIE
HHHHHHHHCHHHHCCEEEEECCCCCCCHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHH
GIQAHEKITILRQEFEKKGNKAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA