| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348160
Identifier: 29348160
GI number: 29348160
Start: 3408968
End: 3410764
Strand: Reverse
Name: 29348160
Synonym: BT_2751
Alternate gene names: NA
Gene position: 3410764-3408968 (Counterclockwise)
Preceding gene: 29348161
Following gene: 29348159
Centisome position: 54.48
GC content: 46.97
Gene sequence:
>1797_bases ATGAAACGACTTACGATTTATTGCTTAACATGTCTTATTGGTGTGAGTCCTCTTTTTGCCCAGCAAGGAGTGACTCAGTG TGGAACCCCTACGGGGCAACCGAAATTTCCAATAGAAACTTATCAGGAACTGCCCGACCCTTCCTCCCCCTCTGATAAAG ACTGGGCAGCAGTTACCAACCCTCAGATTTCCTGGGGAACTATTGACACCCGCTATGCGAAGCATCGGCTTCCTCAGCTG AAAAAACAGCAGCTTACCACTTTAAAAGGCTGGCGTGGCGAACGTATAAATGCGCAGGCTGTTGTCTGGACCGGCACTGA GGTGAAAGATCTGAACTTCAGCTTTACCGATTTTAAAGATAAAAAAGGAAATAGCCTTTCGGATGAGGCGTTTAAAGCCG GTTTCATCCGTTATGTAATGACCGATGAACTGAATAAAGATGGCAGAGGCGCATGCGGTCACCGTCAAGCAGTGGATTAC GATTCGTTGTTGGTAGCCGACCCGATTGATACGAACTTGAAATCAATGTCTGTTCCGGCACGTACTGTTCAACCTATCTG GGTGCAATGCTGGATTCCTCAATCGGCTACTCCCGGAACCTACAAGGGTGCCTTGCTGATAAAAGACGGTTCCCGTCTGT TGCAGCAGCTTAATCTCGAAATCCTTGTTTCTTCCCGTGAACTTCCTGCACCGTCCGAATGGGCTTATCATCTGGATTTG TGGCAGAGCCCGTTTGCCGTAGCCCGTTATTATCAGGTTCCCTTGTGGAGTCAGGAGCATCTGGATGCTATGCGCCCGCT GATGAAAATGCTGGCGGATGCCGGTCAAAAGATTATCACAGCCACTTTGACACATAAACCTTGGAACGGTCAGACTGAAG ATTATTTCGAGACAATGGTAACATGGATGAAACGTGCCGACGGCACTTGGGCTTTTGACTATACGGTTTTTGATCGCTGG GTAGAGTTTATGATGAGTGTCGGTATCAATCAGCAGATTAACTGTTACTCTATGGTTCCCTGGGAATTATCTTTCCAGTA TTTTGATCAGGCAACAAATTCATTGAAATTTGTGAGGACAGCACCGGGAGAACCTGCTTATGAAGAAATGTGGGTTGCGA TGCTTACTTCTTTTTCCAAGCATCTGAGAGAAAAGGGATGGTTTGATATTTGTGCAATTGCGATGGACGAGCGTCCGATG GATGTCATGCAGAAAACGTTGAAAGTAATCCGCAAGGCAGATCCGGAGTTTAAAGTTTCACTGGCCGGTAATTATCATGC TGAGATAGAGCCGGACTTGTACGATTATTGCATTGTTATCGGACAGAACTTCCCGGAAGAAGTACGTCTCCGCCGTGCGG CCGAGAATAAACGTACCACCTATTATACTTGTTGTACGGAAGCACATCCCAATACATTCACTTTCTCCGATCCTGCTGAG GCTGCATGGATGAGTTTCTATTCTTCGAAGAAGCATCTGGACGGCTATCTGCGTTGGGCATACAATAGCTGGCCTTTGGA GCCGTTGCTCGATTCACGTTTCCGCACGTGGGCGGCTGGAGATACTTATCTTGTGTATCCGGGAGCCCGTAGCTGTATCC GTTTCGAACGTCTGATCGAAGGTATTCAGGCACATGAGAAAATAACGATTCTTCGTCAGGAATTTGAGAAGAAGGGAAAT AAAGCCGGATTAAAGAAGATAGAGAAAATGCTGGCCCCGTTCAATTTGGGTAATATGCCGGAAATACCAGCAGCCGTTAC CGTAAACCGGGCCAATCAGATACTTCATTCGTTTTGA
Upstream 100 bases:
>100_bases CGCTATAAATCCTTGATTGTCTATTATGATGTAGACCCCATGTAGCACTCGATACAGACCTAATATTTTTCTTATAATAA CCTTTATAAATTAACTAACC
Downstream 100 bases:
>100_bases TAATAGAAACGAATGAAGCCTGTCAATTATTAAACGTAAATTATGAAGAAAATATTATTTGTCTGCCTCGGAAATATCTG CCGTAGCTCTACGGCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTNPQISWGTIDTRYAKHRLPQL KKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKDKKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDY DSLLVADPIDTNLKSMSVPARTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMVTWMKRADGTWAFDYTVFDRW VEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRTAPGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPM DVMQKTLKVIRKADPEFKVSLAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIEGIQAHEKITILRQEFEKKGN KAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF
Sequences:
>Translated_598_residues MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTNPQISWGTIDTRYAKHRLPQL KKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKDKKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDY DSLLVADPIDTNLKSMSVPARTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMVTWMKRADGTWAFDYTVFDRW VEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRTAPGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPM DVMQKTLKVIRKADPEFKVSLAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIEGIQAHEKITILRQEFEKKGN KAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF >Mature_598_residues MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTNPQISWGTIDTRYAKHRLPQL KKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKDKKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDY DSLLVADPIDTNLKSMSVPARTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMVTWMKRADGTWAFDYTVFDRW VEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRTAPGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPM DVMQKTLKVIRKADPEFKVSLAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIEGIQAHEKITILRQEFEKKGN KAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68606; Mature: 68606
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTN CCCCHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECC PQISWGTIDTRYAKHRLPQLKKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKD CCEECCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCEECCCCC KKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDYDSLLVADPIDTNLKSMSVPA CCCCCCCHHHHHHHHHHEEEHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCC RTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL CCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCEEEEEECCCCCCCCCCEEEEHH WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMV HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHH TWMKRADGTWAFDYTVFDRWVEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRT HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEE APGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPMDVMQKTLKVIRKADPEFKVS CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE LAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE ECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCHH AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIE HHHHHHHHCHHHHCCEEEEECCCCCCCHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHH GIQAHEKITILRQEFEKKGNKAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHCC >Mature Secondary Structure MKRLTIYCLTCLIGVSPLFAQQGVTQCGTPTGQPKFPIETYQELPDPSSPSDKDWAAVTN CCCCHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECC PQISWGTIDTRYAKHRLPQLKKQQLTTLKGWRGERINAQAVVWTGTEVKDLNFSFTDFKD CCEECCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCEECCCCC KKGNSLSDEAFKAGFIRYVMTDELNKDGRGACGHRQAVDYDSLLVADPIDTNLKSMSVPA CCCCCCCHHHHHHHHHHEEEHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCC RTVQPIWVQCWIPQSATPGTYKGALLIKDGSRLLQQLNLEILVSSRELPAPSEWAYHLDL CCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCEEEEEECCCCCCCCCCEEEEHH WQSPFAVARYYQVPLWSQEHLDAMRPLMKMLADAGQKIITATLTHKPWNGQTEDYFETMV HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHH TWMKRADGTWAFDYTVFDRWVEFMMSVGINQQINCYSMVPWELSFQYFDQATNSLKFVRT HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEE APGEPAYEEMWVAMLTSFSKHLREKGWFDICAIAMDERPMDVMQKTLKVIRKADPEFKVS CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE LAGNYHAEIEPDLYDYCIVIGQNFPEEVRLRRAAENKRTTYYTCCTEAHPNTFTFSDPAE ECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCHH AAWMSFYSSKKHLDGYLRWAYNSWPLEPLLDSRFRTWAAGDTYLVYPGARSCIRFERLIE HHHHHHHHCHHHHCCEEEEECCCCCCCHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHH GIQAHEKITILRQEFEKKGNKAGLKKIEKMLAPFNLGNMPEIPAAVTVNRANQILHSF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA