Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348076

Identifier: 29348076

GI number: 29348076

Start: 3322197

End: 3322850

Strand: Reverse

Name: 29348076

Synonym: BT_2666

Alternate gene names: NA

Gene position: 3322850-3322197 (Counterclockwise)

Preceding gene: 29348077

Following gene: 29348075

Centisome position: 53.08

GC content: 41.9

Gene sequence:

>654_bases
ATGAGTGCTGAAGTACAAGAGAGCAGCGGAAAAAGAGGAAAAGGCAAGCAGAAGAAAATGACTGTCCGGGTAGACTTTAC
CCCGATGGTGGATATGAACATGTTGCTGATTACTTTCTTTATGCTTTGTACCACGCTGAGCAAGCCTCAGACGATGGAAA
TAAGCATGCCGAGCAATGACAAGGATATAACTGAACAACAAAAGAGTATGGTGAAAGCCTCTCAGGCAATTACATTATTG
CTGGGAGCCGATAACAAGCTCTATTACTATGAGGGAGAGCCTAACTACAAGGATTACACCTCATTGAAAGAGACTAGTTA
CGGGGCAAGCGGGTTACGTGCCGTACTTCTTCAGAAAAATGCTGCAGCTGTCAATCAGGTAAGAGCTTTGAAACAACAGA
AGCTCGATCTGAAGATAACAGATGACGAATACAAAAAGAAGGTTTCCGAAATAAAAAGCGGAAAAAATACGCCGACCGTC
ATTATCAAGGCGACGGATGATGCTTCTTATATGAATCTGATTGATGCATTGGACGAGATGCAGATATGTAATATAGGTAA
ATATGTGATAACGGATATTGCCGAAGCTGATGAGTTCCTGATTAAGAATTATGATGCTAAGGGAGAACTGTCACAGAACT
TGGCCGATAAATGA

Upstream 100 bases:

>100_bases
AAAGAACGTAATGAACTCACTTCAGGATTTGCGGGAAAATCGGTATAATCTGATTACTTCTCTCAAAGCAGAATCTGAAA
ATTAAAAGGGAGGAAAGACA

Downstream 100 bases:

>100_bases
TGTAACACCTAAAAAAAGAAAGTAAAATGGCAAAATTAGATTTAGCTTCTTCGGAATGGTGTCAGCTGATTTTTGAAGGC
AAGAATCAAGCGTACGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transport Energizing Protein ExbD/lR Family; Outer Membrane Transport Energization Protein Exbd; Biopolymer Transport ExbD Protein; Biopolymer Transport Protein Exbd/lr

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSNDKDITEQQKSMVKASQAITLL
LGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKNAAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTV
IIKATDDASYMNLIDALDEMQICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK

Sequences:

>Translated_217_residues
MSAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSNDKDITEQQKSMVKASQAITLL
LGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKNAAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTV
IIKATDDASYMNLIDALDEMQICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK
>Mature_216_residues
SAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSNDKDITEQQKSMVKASQAITLLL
GADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKNAAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTVI
IKATDDASYMNLIDALDEMQICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24298; Mature: 24167

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSND
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
KDITEQQKSMVKASQAITLLLGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKN
CHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCC
AAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTVIIKATDDASYMNLIDALDEM
HHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
QICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSND
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
KDITEQQKSMVKASQAITLLLGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKN
CHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCC
AAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTVIIKATDDASYMNLIDALDEM
HHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
QICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA