Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348077

Identifier: 29348077

GI number: 29348077

Start: 3322866

End: 3323471

Strand: Reverse

Name: 29348077

Synonym: BT_2667

Alternate gene names: NA

Gene position: 3323471-3322866 (Counterclockwise)

Preceding gene: 29348078

Following gene: 29348076

Centisome position: 53.09

GC content: 43.23

Gene sequence:

>606_bases
ATGGGTAGAGCGAAAATTAAAAAGAAAGATACGTTCATAGATATGACCGCTATGAGTGACGTAACTGTATTGCTTCTGAC
TTTCTTTATGTTGACATCAACATTTGTGAAGAAGGAGCCGGTGCAGGTTACCACTCCAGCCTCCGTATCGGAAATCAAGA
TTCCGGAGACAGATGTACTCCAGATTCTGGTTGACCAGGAAGGAAAAATATTTATGAGTCTCGACAAGCAGCAGGATATG
CAGGCTGTCTTGGAGAGTATGGGTGAAGAGTATGGCATCAAGTTCACTCCGGAACAGGCAAAGAGGTTCACAGTGGCTTC
TACGTTTGGAGTGCCTATCAGAAGTATGCAGAAATTCCTTGACCTCCCGGAAGATCAACGGGACAAAATTCTGAAGAATG
AAGGAATTCCTTGTGATAGTACCGATAATCAGTTCAAGTCGTGGGTGCGTAATGCACGTGCCGCCAATGCTGATCTGCGA
ATTGCTATTAAAGCGGACGCTTCAACTCCATACTCAGTGATAAAGAACGTAATGAACTCACTTCAGGATTTGCGGGAAAA
TCGGTATAATCTGATTACTTCTCTCAAAGCAGAATCTGAAAATTAA

Upstream 100 bases:

>100_bases
TTGACAAATTGACTTACGGACTCGACGAAGTCGGATTCTCTATCGTGCAGACTTTTGCAGCTACTCATTAATTTGGCGAA
CCCTTTAAAATCTATTAATC

Downstream 100 bases:

>100_bases
AAGGGAGGAAAGACAATGAGTGCTGAAGTACAAGAGAGCAGCGGAAAAAGAGGAAAAGGCAAGCAGAAGAAAATGACTGT
CCGGGTAGACTTTACCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Biopolymer Transport Protein ExbD/lR; Outer Membrane Transport Energization Protein Exbd; Biopolymer Transport Protein Exbd/lr

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGRAKIKKKDTFIDMTAMSDVTVLLLTFFMLTSTFVKKEPVQVTTPASVSEIKIPETDVLQILVDQEGKIFMSLDKQQDM
QAVLESMGEEYGIKFTPEQAKRFTVASTFGVPIRSMQKFLDLPEDQRDKILKNEGIPCDSTDNQFKSWVRNARAANADLR
IAIKADASTPYSVIKNVMNSLQDLRENRYNLITSLKAESEN

Sequences:

>Translated_201_residues
MGRAKIKKKDTFIDMTAMSDVTVLLLTFFMLTSTFVKKEPVQVTTPASVSEIKIPETDVLQILVDQEGKIFMSLDKQQDM
QAVLESMGEEYGIKFTPEQAKRFTVASTFGVPIRSMQKFLDLPEDQRDKILKNEGIPCDSTDNQFKSWVRNARAANADLR
IAIKADASTPYSVIKNVMNSLQDLRENRYNLITSLKAESEN
>Mature_200_residues
GRAKIKKKDTFIDMTAMSDVTVLLLTFFMLTSTFVKKEPVQVTTPASVSEIKIPETDVLQILVDQEGKIFMSLDKQQDMQ
AVLESMGEEYGIKFTPEQAKRFTVASTFGVPIRSMQKFLDLPEDQRDKILKNEGIPCDSTDNQFKSWVRNARAANADLRI
AIKADASTPYSVIKNVMNSLQDLRENRYNLITSLKAESEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22723; Mature: 22592

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAKIKKKDTFIDMTAMSDVTVLLLTFFMLTSTFVKKEPVQVTTPASVSEIKIPETDVL
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCHHHH
QILVDQEGKIFMSLDKQQDMQAVLESMGEEYGIKFTPEQAKRFTVASTFGVPIRSMQKFL
HHEECCCCCEEEEECCHHHHHHHHHHCCHHCCCEECHHHHHHEEHHHHCCCCHHHHHHHH
DLPEDQRDKILKNEGIPCDSTDNQFKSWVRNARAANADLRIAIKADASTPYSVIKNVMNS
CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH
LQDLRENRYNLITSLKAESEN
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRAKIKKKDTFIDMTAMSDVTVLLLTFFMLTSTFVKKEPVQVTTPASVSEIKIPETDVL
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCHHHH
QILVDQEGKIFMSLDKQQDMQAVLESMGEEYGIKFTPEQAKRFTVASTFGVPIRSMQKFL
HHEECCCCCEEEEECCHHHHHHHHHHCCHHCCCEECHHHHHHEEHHHHCCCCHHHHHHHH
DLPEDQRDKILKNEGIPCDSTDNQFKSWVRNARAANADLRIAIKADASTPYSVIKNVMNS
CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH
LQDLRENRYNLITSLKAESEN
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA