Click here to switch to the map view.

The map label for this gene is 29348075

Identifier: 29348075

GI number: 29348075

Start: 3321358

End: 3322170

Strand: Reverse

Name: 29348075

Synonym: BT_2665

Alternate gene names: NA

Gene position: 3322170-3321358 (Counterclockwise)

Preceding gene: 29348076

Following gene: 29348074

Centisome position: 53.07

GC content: 46.13

Gene sequence:

>813_bases
ATGGCAAAATTAGATTTAGCTTCTTCGGAATGGTGTCAGCTGATTTTTGAAGGCAAGAATCAAGCGTACGGCGCATATAG
AATGCGTGCCAATTCACCCAGACGGCATACTATTGCAATGCTGATTGTGGTGGCGATAGCAATCGTTGGATTTACTATCC
CTACGCTGCTTAAGTTGGCGACCCCGGAGCAAAAGGAAGTAATGACAGAGGTTACAACTTTGTCGAAATTGGCAGAACCG
GAAATCAAACAGGAAGAGATGAAACGGGTAGAACCGGTTGCACCTCCCCCTCCTGCACTGAAGAGTTCTATTAAGTTTAC
TGCCCCTGTCATCAAGAAAGATGAAGAGGTGCACGAAGACGATGAGATCAAGAGTCAGGAAGAATTGACTTCTACCAAAG
TGGCAATCTCCATTGCCGACGTAAAAGGTAATGACGAAGCCAACGGAGCCGATATTGCTGACCTGAAGCAAGTGGTGACA
CAGGCTGCGGAACCGGAAAAAGTATTTGATATGGTAGAGCAGATGCCGACCTTCCCCGGTGGACAGCAGGAACTGATGTC
ATACCTTGGGAAAAATATCAAGTATCCGACAATTGCACAGGAGAATGGAACACAAGGTCGCGTTATTATCCAGTTTGTGG
TAGAGCGTGACGGTACTATCACCGATGTGCACGTAGCTCGTGGTGTAGACCCATACTTAGATAAAGAAGCCGTGCGTGTG
GTACAAAGTATGCCGAAATGGATTCCTGGTAAACAAAATGGTAAAGCGGTACGTGTGAAATTCACCGTTCCGGTAATGTT
TAGATTACAGTAA

Upstream 100 bases:

>100_bases
CCGAAGCTGATGAGTTCCTGATTAAGAATTATGATGCTAAGGGAGAACTGTCACAGAACTTGGCCGATAAATGATGTAAC
ACCTAAAAAAAGAAAGTAAA

Downstream 100 bases:

>100_bases
GATGATGAAGAGACAATTTTGGCTGGTAGGAATCGTTTTGTTGGCGGTGTTGAGTGCTTGCCGTTCCAAATCGGATGGAC
CGACGGATACGTATTCGTCT

Product: TonB

Products: NA

Alternate protein names: NB Protein; Conserved Transporter; Nb Family Protein; Outer Membrane Protein nB; NB-Dependent Receptor; Outer Membrane Transport Energization Protein nb; NB Family C-Terminal Domain Protein; Protein nB; Cytochrome C Biogenesis; Outer Membrane Protein; Peptidase; NB Family Outer Membrane Receptor Protein; NB-Related Protein; LOW QUALITY PROTEIN Outer Membrane Protein; Alpha-2-Macroglobulin Domain Protein

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAKLDLASSEWCQLIFEGKNQAYGAYRMRANSPRRHTIAMLIVVAIAIVGFTIPTLLKLATPEQKEVMTEVTTLSKLAEP
EIKQEEMKRVEPVAPPPPALKSSIKFTAPVIKKDEEVHEDDEIKSQEELTSTKVAISIADVKGNDEANGADIADLKQVVT
QAAEPEKVFDMVEQMPTFPGGQQELMSYLGKNIKYPTIAQENGTQGRVIIQFVVERDGTITDVHVARGVDPYLDKEAVRV
VQSMPKWIPGKQNGKAVRVKFTVPVMFRLQ

Sequences:

>Translated_270_residues
MAKLDLASSEWCQLIFEGKNQAYGAYRMRANSPRRHTIAMLIVVAIAIVGFTIPTLLKLATPEQKEVMTEVTTLSKLAEP
EIKQEEMKRVEPVAPPPPALKSSIKFTAPVIKKDEEVHEDDEIKSQEELTSTKVAISIADVKGNDEANGADIADLKQVVT
QAAEPEKVFDMVEQMPTFPGGQQELMSYLGKNIKYPTIAQENGTQGRVIIQFVVERDGTITDVHVARGVDPYLDKEAVRV
VQSMPKWIPGKQNGKAVRVKFTVPVMFRLQ
>Mature_269_residues
AKLDLASSEWCQLIFEGKNQAYGAYRMRANSPRRHTIAMLIVVAIAIVGFTIPTLLKLATPEQKEVMTEVTTLSKLAEPE
IKQEEMKRVEPVAPPPPALKSSIKFTAPVIKKDEEVHEDDEIKSQEELTSTKVAISIADVKGNDEANGADIADLKQVVTQ
AAEPEKVFDMVEQMPTFPGGQQELMSYLGKNIKYPTIAQENGTQGRVIIQFVVERDGTITDVHVARGVDPYLDKEAVRVV
QSMPKWIPGKQNGKAVRVKFTVPVMFRLQ

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29986; Mature: 29855

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLDLASSEWCQLIFEGKNQAYGAYRMRANSPRRHTIAMLIVVAIAIVGFTIPTLLKLA
CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
TPEQKEVMTEVTTLSKLAEPEIKQEEMKRVEPVAPPPPALKSSIKFTAPVIKKDEEVHED
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHCCCHHCHHHCCCCCCCCC
DEIKSQEELTSTKVAISIADVKGNDEANGADIADLKQVVTQAAEPEKVFDMVEQMPTFPG
HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
GQQELMSYLGKNIKYPTIAQENGTQGRVIIQFVVERDGTITDVHVARGVDPYLDKEAVRV
CHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEECCCCCEEEEHHHCCCCHHHHHHHHHH
VQSMPKWIPGKQNGKAVRVKFTVPVMFRLQ
HHHHHHHCCCCCCCCEEEEEEEEEEEEEEC
>Mature Secondary Structure 
AKLDLASSEWCQLIFEGKNQAYGAYRMRANSPRRHTIAMLIVVAIAIVGFTIPTLLKLA
CCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
TPEQKEVMTEVTTLSKLAEPEIKQEEMKRVEPVAPPPPALKSSIKFTAPVIKKDEEVHED
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHCCCHHCHHHCCCCCCCCC
DEIKSQEELTSTKVAISIADVKGNDEANGADIADLKQVVTQAAEPEKVFDMVEQMPTFPG
HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
GQQELMSYLGKNIKYPTIAQENGTQGRVIIQFVVERDGTITDVHVARGVDPYLDKEAVRV
CHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEECCCCCEEEEHHHCCCCHHHHHHHHHH
VQSMPKWIPGKQNGKAVRVKFTVPVMFRLQ
HHHHHHHCCCCCCCCEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA