| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348004
Identifier: 29348004
GI number: 29348004
Start: 3235241
End: 3235828
Strand: Reverse
Name: 29348004
Synonym: BT_2594
Alternate gene names: NA
Gene position: 3235828-3235241 (Counterclockwise)
Preceding gene: 29348005
Following gene: 29348003
Centisome position: 51.69
GC content: 47.11
Gene sequence:
>588_bases ATGAGAATGACCGGAAAATTTGTGTTGCTGCTTGCGGCTATGCTTGCCCTGTTTCTGGGGCAGGCGCAGGCCCAACGCTG CCTGCCGGGTATGAAAGGTGTGCAGCTAATGGCGGATATGGTTGACGGTTTTTATTGCGGGAAGGAACGTAATGATACGG GATTCGCTTTCGGACTTGCCGTTTCTACCTATGCTAAGGGAGGAAATAAATGGGCATCGGGTATTGAAATCATGCGGCGG TATTATCCCTACCGTAATACACGTATCCCTTTGGAGCAGTATACTGCGGAAGGCGGCTACTATTACAATTTCTTTTCCGA CCCAGGGAAAAATGTATTTCTGAATATTGGTGCTTCAGGATTGATGGGGTATGAAACTGTAAACGGTGGAAAGGGATTGC TCTTTGACGGTGCCGTCCTGAAAAAACATGAATCGTTCATTTATGGCGGTGCAGTGACACTGGAAGCGGAAACTTATCTT TCAGACAAGGTCGTCCTGTTACTGCGTCTTCGTGAACGTGTTCTTTGGGGGAGTGCCGCAAAGCACTTCTATACCCAATA TGGCTTGGGCATCAAATACATTTTATAA
Upstream 100 bases:
>100_bases TGGTGGAGATGTATGAGAAACAGGGAGGACGCCACCAGATGTTTGAGGTGGATAATGAGTCCCTTGTGCGTGCTGAACCC GTCAACGAATTGAAGGTACG
Downstream 100 bases:
>100_bases TGACTAAATCCATACGAAAAATGAAAAAGATACTTGATCAGATAATGATATTGTGCTGCATGGCAGCCGCCTTGTTTTGT TTTACCTTTTGTAGTGATGA
Product: conjugate transposon protein
Products: NA
Alternate protein names: Conserved Protein Found In Conjugate Transposon TraO; Transfer Complex Protein TraO; Conjugate Transposon Protein; Conjugative Transposon Protein Trao
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLAVSTYAKGGNKWASGIEIMRR YYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASGLMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYL SDKVVLLLRLRERVLWGSAAKHFYTQYGLGIKYIL
Sequences:
>Translated_195_residues MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLAVSTYAKGGNKWASGIEIMRR YYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASGLMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYL SDKVVLLLRLRERVLWGSAAKHFYTQYGLGIKYIL >Mature_195_residues MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLAVSTYAKGGNKWASGIEIMRR YYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASGLMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYL SDKVVLLLRLRERVLWGSAAKHFYTQYGLGIKYIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21706; Mature: 21706
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCEEEHHH VSTYAKGGNKWASGIEIMRRYYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASG HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEEECCCC LMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYLSDKVVLLLRLRERVLWGSAA CCCEEECCCCCCEEECCHHHHHCCCEEECCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHH KHFYTQYGLGIKYIL HHHHHHHCCCEEEEC >Mature Secondary Structure MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCEEEHHH VSTYAKGGNKWASGIEIMRRYYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASG HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEEECCCC LMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYLSDKVVLLLRLRERVLWGSAA CCCEEECCCCCCEEECCHHHHHCCCEEECCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHH KHFYTQYGLGIKYIL HHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA