Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348005

Identifier: 29348005

GI number: 29348005

Start: 3235825

End: 3236754

Strand: Reverse

Name: 29348005

Synonym: BT_2595

Alternate gene names: NA

Gene position: 3236754-3235825 (Counterclockwise)

Preceding gene: 29348006

Following gene: 29348004

Centisome position: 51.7

GC content: 49.46

Gene sequence:

>930_bases
ATGCAATCGGATATGAAAAAGATTCTGATGATGTTTTTTGCCCTGATGACGGGGGTGACGGCTGCCAGTGCGCAGTTGAG
TAGCGGGGATTTTTTTGAGGGACTGAGCCGCAAGATCGGCTTTAGCAGGATGATAGCCCCGCACGGGCTGGAAATCACTT
ATGATAAAACGGTACATGTCATATTTCCTTCCCCGATCAAGTATGTGGACCTGGGGTCCACCAATCTGATAGCCGGAAAG
GCGGATGCGGCGGAGAACGTGATCCGTGTGAAAGCTGCTAAAAAGCATTTCCGGGATGAGACGAACATGAGCGTGATCAC
TGAAGATGGAAATTTTTACACGTTCAATGTCAGGTATGCGGATGAACCGCTCCTGTTGAACGTGGAGATGTGCGATTTCA
TTCATGACGGTGAAACGGTGAACCGTCCGAACAATGCCATGGAAATCTATTTGCAGGAACTGGGCAATGAGTCCCCGCGT
CTGGTACGCCTGATTATGAAGTCCGTGCACAGGCAGGACAAAAGACGGGTCAGACATATCGGCTGTAAACGTTTCGGGGT
CCAGTTCCTACTTAGGGGGCTTTATACCCATAATGACCTGCTGTACTTTCATACACAGCTAAGGAATGAGACGAATGTCC
CGTTTGATGTGGATTTCGTGACCTTCAAGATTGTCGACAAAAAGATCGTGAAACGTACCGCCATGCAGGAACAGGTGATC
TATCCTTTGCGTGCCTGCAACTATGTGACCCGTGTGGATGGAAAGGCCTCGGAACGTACGGTGTTCGCGTTACCCAAATT
TACGATACCGGAGGACAAGAAACTGGTGGTGGAGATGTATGAGAAACAGGGAGGACGCCACCAGATGTTTGAGGTGGATA
ATGAGTCCCTTGTGCGTGCTGAACCCGTCAACGAATTGAAGGTACGATGA

Upstream 100 bases:

>100_bases
AGGTCACTCTGAAAGCAGGACACAGGCTGTTGCTTCATTCTCCCGAACAGTGAGACACAAAAGCAGTAAAAGAAAATCAA
TCATTAACTAACCAATCAAG

Downstream 100 bases:

>100_bases
GAATGACCGGAAAATTTGTGTTGCTGCTTGCGGCTATGCTTGCCCTGTTTCTGGGGCAGGCGCAGGCCCAACGCTGCCTG
CCGGGTATGAAAGGTGTGCA

Product: conjugate transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHVIFPSPIKYVDLGSTNLIAGK
ADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYADEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPR
LVRLIMKSVHRQDKRRVRHIGCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI
YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRAEPVNELKVR

Sequences:

>Translated_309_residues
MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHVIFPSPIKYVDLGSTNLIAGK
ADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYADEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPR
LVRLIMKSVHRQDKRRVRHIGCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI
YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRAEPVNELKVR
>Mature_309_residues
MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHVIFPSPIKYVDLGSTNLIAGK
ADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYADEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPR
LVRLIMKSVHRQDKRRVRHIGCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI
YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRAEPVNELKVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35581; Mature: 35581

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHV
CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEECCEEEE
IFPSPIKYVDLGSTNLIAGKADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYA
ECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEC
DEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPRLVRLIMKSVHRQDKRRVRHI
CCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH
YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRA
HHHHHCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE
EPVNELKVR
CCCHHCCCC
>Mature Secondary Structure
MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHV
CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEECCEEEE
IFPSPIKYVDLGSTNLIAGKADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYA
ECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEC
DEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPRLVRLIMKSVHRQDKRRVRHI
CCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH
YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRA
HHHHHCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE
EPVNELKVR
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA