Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348003

Identifier: 29348003

GI number: 29348003

Start: 3234756

End: 3235241

Strand: Reverse

Name: 29348003

Synonym: BT_2593

Alternate gene names: NA

Gene position: 3235241-3234756 (Counterclockwise)

Preceding gene: 29348004

Following gene: 29347990

Centisome position: 51.68

GC content: 45.68

Gene sequence:

>486_bases
ATGACTAAATCCATACGAAAAATGAAAAAGATACTTGATCAGATAATGATATTGTGCTGCATGGCAGCCGCCTTGTTTTG
TTTTACCTTTTGTAGTGATGACCTGGATATTCAGCAGGAATATCCGTTCACGGTAGAGGCAATGCCCGTAGCGGACAAGA
TAGCCGGCGGCCAGACGGTGGAAATCCGTCTGGAAATTACCGAAGAGGGCAATTTTTCCGGAACGCTTTATACTCTCCGC
TATTTCCAGCCTGACGGGAATGGATTGTTGAAGCTGGAAGACGGTACGGTTCTGAAACCCAATGACCGCTATTTATTGAG
TGAGAAGAAGTTCCGGTTGTATTACACTTCAAGGAGTACGAATGAGGCACAAACGATTGATTTGTACTTTGAAAATAACT
GGCAGGATGTCCGGCAGCTGAGTTTCAGTTTCAATAACAGGAATGACGGGGCGGAGAAAACGGAAGGAGGAGTCCGTGCC
CAGTAA

Upstream 100 bases:

>100_bases
AGGTCGTCCTGTTACTGCGTCTTCGTGAACGTGTTCTTTGGGGGAGTGCCGCAAAGCACTTCTATACCCAATATGGCTTG
GGCATCAAATACATTTTATA

Downstream 100 bases:

>100_bases
ATTGAGCAGGATGTTCTTGAACTGCAGTGACGAGAAATACACTCCGGGATACGGAGTGGCTCCCATCATCAAGTATCTGC
CTGAGGGGAAGATCATATGG

Product: conjugate transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTVEIRLEITEEGNFSGTLYTLR
YFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRSTNEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRA
Q

Sequences:

>Translated_161_residues
MTKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTVEIRLEITEEGNFSGTLYTLR
YFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRSTNEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRA
Q
>Mature_160_residues
TKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTVEIRLEITEEGNFSGTLYTLRY
FQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRSTNEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18502; Mature: 18371

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCCEE
EIRLEITEEGNFSGTLYTLRYFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRST
EEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCEECCCCCEEECCCEEEEEEECCCC
NEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRAQ
CCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCCEE
EIRLEITEEGNFSGTLYTLRYFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRST
EEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCEECCCCCEEECCCEEEEEEECCCC
NEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRAQ
CCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA