| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348003
Identifier: 29348003
GI number: 29348003
Start: 3234756
End: 3235241
Strand: Reverse
Name: 29348003
Synonym: BT_2593
Alternate gene names: NA
Gene position: 3235241-3234756 (Counterclockwise)
Preceding gene: 29348004
Following gene: 29347990
Centisome position: 51.68
GC content: 45.68
Gene sequence:
>486_bases ATGACTAAATCCATACGAAAAATGAAAAAGATACTTGATCAGATAATGATATTGTGCTGCATGGCAGCCGCCTTGTTTTG TTTTACCTTTTGTAGTGATGACCTGGATATTCAGCAGGAATATCCGTTCACGGTAGAGGCAATGCCCGTAGCGGACAAGA TAGCCGGCGGCCAGACGGTGGAAATCCGTCTGGAAATTACCGAAGAGGGCAATTTTTCCGGAACGCTTTATACTCTCCGC TATTTCCAGCCTGACGGGAATGGATTGTTGAAGCTGGAAGACGGTACGGTTCTGAAACCCAATGACCGCTATTTATTGAG TGAGAAGAAGTTCCGGTTGTATTACACTTCAAGGAGTACGAATGAGGCACAAACGATTGATTTGTACTTTGAAAATAACT GGCAGGATGTCCGGCAGCTGAGTTTCAGTTTCAATAACAGGAATGACGGGGCGGAGAAAACGGAAGGAGGAGTCCGTGCC CAGTAA
Upstream 100 bases:
>100_bases AGGTCGTCCTGTTACTGCGTCTTCGTGAACGTGTTCTTTGGGGGAGTGCCGCAAAGCACTTCTATACCCAATATGGCTTG GGCATCAAATACATTTTATA
Downstream 100 bases:
>100_bases ATTGAGCAGGATGTTCTTGAACTGCAGTGACGAGAAATACACTCCGGGATACGGAGTGGCTCCCATCATCAAGTATCTGC CTGAGGGGAAGATCATATGG
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTVEIRLEITEEGNFSGTLYTLR YFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRSTNEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRA Q
Sequences:
>Translated_161_residues MTKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTVEIRLEITEEGNFSGTLYTLR YFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRSTNEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRA Q >Mature_160_residues TKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTVEIRLEITEEGNFSGTLYTLRY FQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRSTNEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18502; Mature: 18371
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCCEE EIRLEITEEGNFSGTLYTLRYFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRST EEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCEECCCCCEEECCCEEEEEEECCCC NEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRAQ CCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKSIRKMKKILDQIMILCCMAAALFCFTFCSDDLDIQQEYPFTVEAMPVADKIAGGQTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCCEE EIRLEITEEGNFSGTLYTLRYFQPDGNGLLKLEDGTVLKPNDRYLLSEKKFRLYYTSRST EEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCEECCCCCEEECCCEEEEEEECCCC NEAQTIDLYFENNWQDVRQLSFSFNNRNDGAEKTEGGVRAQ CCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA