Click here to switch to the map view.

The map label for this gene is yyaM [H]

Identifier: 29347977

GI number: 29347977

Start: 3204350

End: 3205270

Strand: Reverse

Name: yyaM [H]

Synonym: BT_2567

Alternate gene names: 29347977

Gene position: 3205270-3204350 (Counterclockwise)

Preceding gene: 29347978

Following gene: 29347973

Centisome position: 51.2

GC content: 46.15

Gene sequence:

>921_bases
ATGAAGAATAAGAAACTGGAAGCCAATCTGAGTATGGCTGTATCAAAAATATTCAGCGGTTTGAATATGAATGCCCTGAA
GTATCTGCTTCCCCTATGGATGAGCCCGTTGACAGGTGCGACACTTCGTTGCACCTTTGCCGCCGCTGCATTTTGGGTGA
TCGGATGGTTCATGCCGCCGGAAAAGTCATCCGCCAAAGACAAATGGCTGCTTTTCCTGTTAGGGGCATTCGGACTGTAC
GGCTTTATGTTTCTTTATCTGGCGGGATTGAGTAAAACGACTCCTGTATCCAGTTCCATATTTACCAGTCTGCAGCCTAT
CTGGGTGTTTCTGATTATGATTTTCTTTTATAAGGAGAAGGCGACATGGAAGAAAATTCTTGGAATCTCAATCGGACTGG
TCGGTGCACTGGTCTGCATCCTGACCCAACAGAGCGATGATTTGGCCTCCGATGCTTTCGTGGGGAATATGCTTTGCCTG
ATCAGTTCCATCGTTTATGCTGTCTATCTGATTCTGAGTCAGCGTATCCTTTCATCTATCGGGGCGATGACTATGTTGAG
ATATACATTCTCCGGTGCGGCGGTTTCTGCTATTATTGTGACATTTATTACAGGATTCGATGCGCCGGTGTTCTCTATGC
CGTTCCATTGGACACCTTTCCTGATATTGATGTTTGTACTCATATTTCCGACAACGATCAGCTATATGTTGCTTCCGGTC
GGTCTGAAGTATCTGAAAACAACAGTCGTCGCGATCTACGGTTATCTGATTCTGATTGTTGCGACCATTGCTTCTCTGGC
TCTCGGACAGGACCGTTTTAGCTGGACGCAGACGTGTGCCATCATTTTTATTTGTATCGGCGTTTATCTGGTTGAGGTAG
CCGAAAGCAAAGACAAGTCGCCGGACCCCTTGAAGAAATAA

Upstream 100 bases:

>100_bases
TCCTTTTGTCTTCAACTTGTTGATAACTATTGTCACATTCTTTTGGGCTTACCTGCGCCGCGATACCTTTTTGTTTAACG
ATCAACTGAAATAAAAAAAG

Downstream 100 bases:

>100_bases
TCATATATAATGTATGATATGAAAAAAAGCGGGCGCCCTTCTCAGGGTGCCCGCTCGCTTATGTCGTCATCATGTTTTAT
AGAGAGGAGCTGATTGCTTG

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKNKKLEANLSMAVSKIFSGLNMNALKYLLPLWMSPLTGATLRCTFAAAAFWVIGWFMPPEKSSAKDKWLLFLLGAFGLY
GFMFLYLAGLSKTTPVSSSIFTSLQPIWVFLIMIFFYKEKATWKKILGISIGLVGALVCILTQQSDDLASDAFVGNMLCL
ISSIVYAVYLILSQRILSSIGAMTMLRYTFSGAAVSAIIVTFITGFDAPVFSMPFHWTPFLILMFVLIFPTTISYMLLPV
GLKYLKTTVVAIYGYLILIVATIASLALGQDRFSWTQTCAIIFICIGVYLVEVAESKDKSPDPLKK

Sequences:

>Translated_306_residues
MKNKKLEANLSMAVSKIFSGLNMNALKYLLPLWMSPLTGATLRCTFAAAAFWVIGWFMPPEKSSAKDKWLLFLLGAFGLY
GFMFLYLAGLSKTTPVSSSIFTSLQPIWVFLIMIFFYKEKATWKKILGISIGLVGALVCILTQQSDDLASDAFVGNMLCL
ISSIVYAVYLILSQRILSSIGAMTMLRYTFSGAAVSAIIVTFITGFDAPVFSMPFHWTPFLILMFVLIFPTTISYMLLPV
GLKYLKTTVVAIYGYLILIVATIASLALGQDRFSWTQTCAIIFICIGVYLVEVAESKDKSPDPLKK
>Mature_306_residues
MKNKKLEANLSMAVSKIFSGLNMNALKYLLPLWMSPLTGATLRCTFAAAAFWVIGWFMPPEKSSAKDKWLLFLLGAFGLY
GFMFLYLAGLSKTTPVSSSIFTSLQPIWVFLIMIFFYKEKATWKKILGISIGLVGALVCILTQQSDDLASDAFVGNMLCL
ISSIVYAVYLILSQRILSSIGAMTMLRYTFSGAAVSAIIVTFITGFDAPVFSMPFHWTPFLILMFVLIFPTTISYMLLPV
GLKYLKTTVVAIYGYLILIVATIASLALGQDRFSWTQTCAIIFICIGVYLVEVAESKDKSPDPLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33887; Mature: 33887

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]