| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347567
Identifier: 29347567
GI number: 29347567
Start: 2715522
End: 2716394
Strand: Reverse
Name: 29347567
Synonym: BT_2157
Alternate gene names: NA
Gene position: 2716394-2715522 (Counterclockwise)
Preceding gene: 29347568
Following gene: 29347566
Centisome position: 43.39
GC content: 45.48
Gene sequence:
>873_bases ATGAAGAAAGTATTTTATCCATTAGCTTGTTGTCTTGCAGCGGGAGTTTTAGTTTCCTGCAGCGGTCAGAAGAAAGCCGG GAGTGCTCAGGAAGAGCAATCGGCAAACGAAGTAGCAGTATCATATTCAAAATCATTAAAAGCAGCGGAGATGGATAGCT TGCAATTACCGGTAGATGCGGATGGTTACATCACTATCTTTGACGGCAAAACATTTAATGGATGGCGTGGTTATGGCAAG GACAGAGTTCCTTCCAAGTGGACTATCGAGGACGGTTGCATCAAGTTCAACGGTTCCGGTGGCGGTGAAGCACAGGATGG TGATGGCGGAGACCTGATCTTTGCTCACAAATTCAAAAACTTCGAACTGGAAATGGAATGGAAAGTTTCCAAAGGCGGTA ACTCCGGTATCTTCTATTTAGCTCAGGAAGTGACTTCTAAAGATAAGGACGGCAACGACGTGCTCGAACCTATTTATATT TCCGCACCTGAATATCAGGTATTGGACAACGACAATCATCCGGATGCTAAATTGGGGAAAGACAATAACCGGCAGTCGGC TTCTTTATATGACATGATTCCGGCAGTTCCTCAGAATGCGAAACCTTTCGGCGAATGGAACAAGGCTAAGATCATGGTTT ATAAAGGTACTGTTGTTCACGGACAGAATGACGAGAATGTACTCGAATACCACTTGTGGACCAAACAATGGACTGACCTT TTGCAAGCCAGCAAATTCAGCCAGGACAAATGGCCGTTGGCTTTCGAACTGCTGAATAATTGCGGTGGCGAAAACCACGA AGGATTTATCGGAATGCAGGATCACGGTGATGACGTTTGGTTCCGCAATATCCGCGTGAAAGTTCTGGACTGA
Upstream 100 bases:
>100_bases AAACATAATTATCGTGAAGGATGGAAGTTGCCTGATATGCCACGATAACACGATAAAAGTAAGTTAAGAATTAAAGATTA AAAATTAAATAGTTATTATT
Downstream 100 bases:
>100_bases TCACATAAATAATTCAAAGATAGGCTGTGTCAAAAGTAACATCAACATGGCATTTAGTTCTGAATGACAGAATGATATGC CCGACGAACTTCTGACACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDADGYITIFDGKTFNGWRGYGK DRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYI SAPEYQVLDNDNHPDAKLGKDNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD
Sequences:
>Translated_290_residues MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDADGYITIFDGKTFNGWRGYGK DRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYI SAPEYQVLDNDNHPDAKLGKDNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD >Mature_290_residues MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDADGYITIFDGKTFNGWRGYGK DRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYI SAPEYQVLDNDNHPDAKLGKDNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32237; Mature: 32237
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDA CCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCEEEEHHHCCCCCCCCCEECCCCC DGYITIFDGKTFNGWRGYGKDRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKN CCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCEEEEEECCC FELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYISAPEYQVLDNDNHPDAKLGK EEEEEEEEEECCCCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCC DNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL CCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECHHHHHHH LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD HHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEEEEC >Mature Secondary Structure MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDA CCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCEEEEHHHCCCCCCCCCEECCCCC DGYITIFDGKTFNGWRGYGKDRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKN CCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCEEEEEECCC FELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYISAPEYQVLDNDNHPDAKLGK EEEEEEEEEECCCCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCC DNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL CCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECHHHHHHH LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD HHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA