Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347567

Identifier: 29347567

GI number: 29347567

Start: 2715522

End: 2716394

Strand: Reverse

Name: 29347567

Synonym: BT_2157

Alternate gene names: NA

Gene position: 2716394-2715522 (Counterclockwise)

Preceding gene: 29347568

Following gene: 29347566

Centisome position: 43.39

GC content: 45.48

Gene sequence:

>873_bases
ATGAAGAAAGTATTTTATCCATTAGCTTGTTGTCTTGCAGCGGGAGTTTTAGTTTCCTGCAGCGGTCAGAAGAAAGCCGG
GAGTGCTCAGGAAGAGCAATCGGCAAACGAAGTAGCAGTATCATATTCAAAATCATTAAAAGCAGCGGAGATGGATAGCT
TGCAATTACCGGTAGATGCGGATGGTTACATCACTATCTTTGACGGCAAAACATTTAATGGATGGCGTGGTTATGGCAAG
GACAGAGTTCCTTCCAAGTGGACTATCGAGGACGGTTGCATCAAGTTCAACGGTTCCGGTGGCGGTGAAGCACAGGATGG
TGATGGCGGAGACCTGATCTTTGCTCACAAATTCAAAAACTTCGAACTGGAAATGGAATGGAAAGTTTCCAAAGGCGGTA
ACTCCGGTATCTTCTATTTAGCTCAGGAAGTGACTTCTAAAGATAAGGACGGCAACGACGTGCTCGAACCTATTTATATT
TCCGCACCTGAATATCAGGTATTGGACAACGACAATCATCCGGATGCTAAATTGGGGAAAGACAATAACCGGCAGTCGGC
TTCTTTATATGACATGATTCCGGCAGTTCCTCAGAATGCGAAACCTTTCGGCGAATGGAACAAGGCTAAGATCATGGTTT
ATAAAGGTACTGTTGTTCACGGACAGAATGACGAGAATGTACTCGAATACCACTTGTGGACCAAACAATGGACTGACCTT
TTGCAAGCCAGCAAATTCAGCCAGGACAAATGGCCGTTGGCTTTCGAACTGCTGAATAATTGCGGTGGCGAAAACCACGA
AGGATTTATCGGAATGCAGGATCACGGTGATGACGTTTGGTTCCGCAATATCCGCGTGAAAGTTCTGGACTGA

Upstream 100 bases:

>100_bases
AAACATAATTATCGTGAAGGATGGAAGTTGCCTGATATGCCACGATAACACGATAAAAGTAAGTTAAGAATTAAAGATTA
AAAATTAAATAGTTATTATT

Downstream 100 bases:

>100_bases
TCACATAAATAATTCAAAGATAGGCTGTGTCAAAAGTAACATCAACATGGCATTTAGTTCTGAATGACAGAATGATATGC
CCGACGAACTTCTGACACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDADGYITIFDGKTFNGWRGYGK
DRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYI
SAPEYQVLDNDNHPDAKLGKDNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL
LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD

Sequences:

>Translated_290_residues
MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDADGYITIFDGKTFNGWRGYGK
DRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYI
SAPEYQVLDNDNHPDAKLGKDNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL
LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD
>Mature_290_residues
MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDADGYITIFDGKTFNGWRGYGK
DRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYI
SAPEYQVLDNDNHPDAKLGKDNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL
LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32237; Mature: 32237

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDA
CCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCEEEEHHHCCCCCCCCCEECCCCC
DGYITIFDGKTFNGWRGYGKDRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKN
CCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCEEEEEECCC
FELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYISAPEYQVLDNDNHPDAKLGK
EEEEEEEEEECCCCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCC
DNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL
CCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECHHHHHHH
LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD
HHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKKVFYPLACCLAAGVLVSCSGQKKAGSAQEEQSANEVAVSYSKSLKAAEMDSLQLPVDA
CCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCEEEEHHHCCCCCCCCCEECCCCC
DGYITIFDGKTFNGWRGYGKDRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKN
CCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCEEEEEECCC
FELEMEWKVSKGGNSGIFYLAQEVTSKDKDGNDVLEPIYISAPEYQVLDNDNHPDAKLGK
EEEEEEEEEECCCCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCC
DNNRQSASLYDMIPAVPQNAKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDL
CCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECHHHHHHH
LQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGDDVWFRNIRVKVLD
HHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA