Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347566

Identifier: 29347566

GI number: 29347566

Start: 2714468

End: 2715382

Strand: Reverse

Name: 29347566

Synonym: BT_2156

Alternate gene names: NA

Gene position: 2715382-2714468 (Counterclockwise)

Preceding gene: 29347567

Following gene: 29347563

Centisome position: 43.37

GC content: 40.11

Gene sequence:

>915_bases
ATGAAACTCCAAATAAATCTATGTGCGCTGGCTCTTCTTTTAATGATTCCGTTTACGGCCATGGCACAGTCTAAAACAAA
AGCGAAAGCTAAAAAAGAAGTAGCGATTCAACTCTATTCTGTCAGGGATATATTGAATAAGGTGGACAATAAGGACGGCA
AATGTGACGCCGCTTATATTACTCTTCTGAAGAACTTGGCGAAAATGGGATATACCAGTGTGGAAGCCGCCAATTATAAT
AATGGAAAGTTTTACGACAGAACTCCCGATCAATTTAAAAAAGATGTTGAATCTGCCGGGCTGAAGGTTTTATCCTCACA
TTGCACAAGAGGATTGTCGAAAGAAGAATTAGCTTCCGGTGATTTTTCAAGTTCACTTCAATGGTGGGACCAGTGTATTG
CTGATCATAAAGCTGCCGGTATGAGTTACATTGTAGCTCCTTGGATGGATGTGCCTAAAACACTTAAGGAGTTGGATACA
TATTGTGCTTATTACAATGAAATAGGCAAACGTTGTAAACAGCAGGGGATGTCGTTCGGATACCATAATCATGCTCATGA
ATTTCAGAAGGTAGAAGATAAAGTGATGTATGACTACATGATTGAGCATACCAATCCTGAATATGTTTTCTTCCAGATGG
ATGTTTATTGGGTAGTTCGCGGGCAAAACAGTCCGGTAGATTATTTTAATAAATACCCCGGTCGTTTTAAAATGTTCCAT
ATCAAGGATCACAGAGAAATCGGGCAGAGCGGAATGGTTGGTTTCGACGCTATTTTCAAGAATGCAAAGACGGCTGGTGT
GAAGCATCTTGTTGCAGAGATAGAAAGCTACAGCATGCCCGTAGAGAAAAGTGTCGAGGTAAGTCTGGATTATTTGCTGG
ATGCTCCTTTTGTTAAAAGCTCATACGCTAAATAA

Upstream 100 bases:

>100_bases
CATCAACATGGCATTTAGTTCTGAATGACAGAATGATATGCCCGACGAACTTCTGACACAGCTTTTTTATTTTAATACAT
GAACCCCTTTATCTACAAAC

Downstream 100 bases:

>100_bases
GGCATAAAAAAAAGTCTGTGCATGCTTTTAGCATGTCAGACTTTCAATTCTCTCTAGGCTGTTCTGAATTATTCAGCTAC
AGCTTCAGTTGCAGTGCTAT

Product: putative sugar phosphate isomerase/epimerase

Products: NA

Alternate protein names: Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase Domain-Containing Protein TIM Barrel; Sugar Phosphate Isomerase Epimerase; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase Family Protein; Xlose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANYN
NGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDT
YCAYYNEIGKRCKQQGMSFGYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH
IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKSSYAK

Sequences:

>Translated_304_residues
MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANYN
NGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDT
YCAYYNEIGKRCKQQGMSFGYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH
IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKSSYAK
>Mature_304_residues
MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANYN
NGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDT
YCAYYNEIGKRCKQQGMSFGYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH
IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKSSYAK

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34682; Mature: 34682

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
TLLKNLAKMGYTSVEAANYNNGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASG
HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
DFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDTYCAYYNEIGKRCKQQGMSFG
CCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCEEEEE
IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKS
ECCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHC
SYAK
CCCC
>Mature Secondary Structure
MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
TLLKNLAKMGYTSVEAANYNNGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASG
HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
DFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDTYCAYYNEIGKRCKQQGMSFG
CCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCEEEEE
IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKS
ECCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHC
SYAK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA