| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347568
Identifier: 29347568
GI number: 29347568
Start: 2716447
End: 2717922
Strand: Reverse
Name: 29347568
Synonym: BT_2158
Alternate gene names: NA
Gene position: 2717922-2716447 (Counterclockwise)
Preceding gene: 29347569
Following gene: 29347567
Centisome position: 43.41
GC content: 49.93
Gene sequence:
>1476_bases ATGTCAGACTTTTCAAGAAGAAAATTTCTTAAAACGGGAGCCGCTGCTTTAGCAGGAATCACCATTGCTCCCAGCTCTAT TTTAGGTATGAGCCACGGGCACGTTTCCCCAACCGACAAACTGAACCTTGCAGCCGTAGGTATCGGCGGTATGGGTCATG CCAACATCAACAACGTGAAGGGCACCGAAAACATCGTAGCCCTTTGTGACGTAGACTGGAAATATGCCAAAGGCGTATTC GATGAATTCCCGAATGCGAAGAAATACTGGGATTATCGCAAGATGTACGATGAAATGGGCAAATCCATTGACGGCGTAAT CATTGCTACCGCCGACCATACTCATGCCATCATCACGGCAGACGCCATGACAATGGGCAAGCACGTATACTGCCAGAAAC CGTTGACTCACTCCGTTTACGAATCCCGTTTGCTGACCAAGCTGGCCGCCTCTACCGGAGTAGTTACTCAAATGGGTAAT CAGGGAGCATCGGGCGAAGGTACCGACCTGGTTTGCGAATGGATATGGAATGGAGAAATCGGCGAAGTAACCAAAGTGGA ATGCGCCACCGACCGTCCTATCTGGCCGCAAGGACTGAATGCACCCGAAAAGGCGGACCGCATCCCCAACACATTGAACT GGGATCTTTTCACCGGACCTGCCAAACTGAACCCGTACAACAACGTTTATCATCCCTGGAACTGGCGTGGATGGTGGGAT TACGGTACAGGTGCACTGGGTGATATGGCCTGTCATATTCTGCACCAGCCGTTCAGAGCTCTGAAGCTGGGTTATCCTAC CAAGGTGGAAGGTTCTTCTACTTTATTACTGAGTGCCTGCGCTCCTCAGGCCCAACACGTGAAGATGATTTTCCCCGCCC GCGACAATATGCCGAAAGTTGCCTTGCCGGAAGTTGAGGTACACTGGTATGACGGCGGTATGATGCCGGAACGTCCGAAA GGTTTCCCGGAAGGAAAACAACTGATGGGCCCCGGTGGTGGTCTGACTATCTTCCACGGAACAAAAGATACATTGATTTG CGGCTGCTACGGAGAACAACCTTTCTTGTTGTCAGGCCGTGTGCCCAATGCACCGAAAGTATGCCGCCGTGTTACTTGTT CTCATGAAATGGACTGGGTACGCGCTTGTAAGGAAGACAAATCCAACCGCGTGATGCCGAAAGCGGATTTCTCCGAATCG GGACCGATGAATGAAATGGTGGTAATGGGTGTATTGGCTATCCGTCTGCAAGGATTGAACAAGACACTGGAATGGGACGG CGCTAATATGTGCTTCACTAATATTGGTGATAACGAAACACTCAGAACCTGCATTAAGGACGGATTTACGATTCATGATG GTCACCCGTCATTCAATAAGACCTGGACAGATCCGATCAACGCGAAACAATTTGCAGCCGAACTGGTGAAACATAATTAT CGTGAAGGATGGAAGTTGCCTGATATGCCACGATAA
Upstream 100 bases:
>100_bases CTTGAACAAATACGCGAACGCAGAAAAAACATGAAAAATGGATATGGGTTGCTGCATAGTAATCCACCACAAATAACTAA CTCCTTAAAATAATAAAACC
Downstream 100 bases:
>100_bases CACGATAAAAGTAAGTTAAGAATTAAAGATTAAAAATTAAATAGTTATTATTATGAAGAAAGTATTTTATCCATTAGCTT GTTGTCTTGCAGCGGGAGTT
Product: putative dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Dehydrogenase; Oxidoreductase; Dehydrogenase-Like Protein; NADH-Dependent Dyhydrogenase; NADH-Dependent Dihydrogenase; NADH-Dependent Deydrogenase; Dehydrogenase And Relate Protein; NADH-Dependent Dehydrogenase-Like Protein; Dehydrogenases Related Protein
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSDFSRRKFLKTGAAALAGITIAPSSILGMSHGHVSPTDKLNLAAVGIGGMGHANINNVKGTENIVALCDVDWKYAKGVF DEFPNAKKYWDYRKMYDEMGKSIDGVIIATADHTHAIITADAMTMGKHVYCQKPLTHSVYESRLLTKLAASTGVVTQMGN QGASGEGTDLVCEWIWNGEIGEVTKVECATDRPIWPQGLNAPEKADRIPNTLNWDLFTGPAKLNPYNNVYHPWNWRGWWD YGTGALGDMACHILHQPFRALKLGYPTKVEGSSTLLLSACAPQAQHVKMIFPARDNMPKVALPEVEVHWYDGGMMPERPK GFPEGKQLMGPGGGLTIFHGTKDTLICGCYGEQPFLLSGRVPNAPKVCRRVTCSHEMDWVRACKEDKSNRVMPKADFSES GPMNEMVVMGVLAIRLQGLNKTLEWDGANMCFTNIGDNETLRTCIKDGFTIHDGHPSFNKTWTDPINAKQFAAELVKHNY REGWKLPDMPR
Sequences:
>Translated_491_residues MSDFSRRKFLKTGAAALAGITIAPSSILGMSHGHVSPTDKLNLAAVGIGGMGHANINNVKGTENIVALCDVDWKYAKGVF DEFPNAKKYWDYRKMYDEMGKSIDGVIIATADHTHAIITADAMTMGKHVYCQKPLTHSVYESRLLTKLAASTGVVTQMGN QGASGEGTDLVCEWIWNGEIGEVTKVECATDRPIWPQGLNAPEKADRIPNTLNWDLFTGPAKLNPYNNVYHPWNWRGWWD YGTGALGDMACHILHQPFRALKLGYPTKVEGSSTLLLSACAPQAQHVKMIFPARDNMPKVALPEVEVHWYDGGMMPERPK GFPEGKQLMGPGGGLTIFHGTKDTLICGCYGEQPFLLSGRVPNAPKVCRRVTCSHEMDWVRACKEDKSNRVMPKADFSES GPMNEMVVMGVLAIRLQGLNKTLEWDGANMCFTNIGDNETLRTCIKDGFTIHDGHPSFNKTWTDPINAKQFAAELVKHNY REGWKLPDMPR >Mature_490_residues SDFSRRKFLKTGAAALAGITIAPSSILGMSHGHVSPTDKLNLAAVGIGGMGHANINNVKGTENIVALCDVDWKYAKGVFD EFPNAKKYWDYRKMYDEMGKSIDGVIIATADHTHAIITADAMTMGKHVYCQKPLTHSVYESRLLTKLAASTGVVTQMGNQ GASGEGTDLVCEWIWNGEIGEVTKVECATDRPIWPQGLNAPEKADRIPNTLNWDLFTGPAKLNPYNNVYHPWNWRGWWDY GTGALGDMACHILHQPFRALKLGYPTKVEGSSTLLLSACAPQAQHVKMIFPARDNMPKVALPEVEVHWYDGGMMPERPKG FPEGKQLMGPGGGLTIFHGTKDTLICGCYGEQPFLLSGRVPNAPKVCRRVTCSHEMDWVRACKEDKSNRVMPKADFSESG PMNEMVVMGVLAIRLQGLNKTLEWDGANMCFTNIGDNETLRTCIKDGFTIHDGHPSFNKTWTDPINAKQFAAELVKHNYR EGWKLPDMPR
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54314; Mature: 54183
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFSRRKFLKTGAAALAGITIAPSSILGMSHGHVSPTDKLNLAAVGIGGMGHANINNVK CCCHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC GTENIVALCDVDWKYAKGVFDEFPNAKKYWDYRKMYDEMGKSIDGVIIATADHTHAIITA CCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEE DAMTMGKHVYCQKPLTHSVYESRLLTKLAASTGVVTQMGNQGASGEGTDLVCEWIWNGEI CHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEEECCCC GEVTKVECATDRPIWPQGLNAPEKADRIPNTLNWDLFTGPAKLNPYNNVYHPWNWRGWWD CCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEC YGTGALGDMACHILHQPFRALKLGYPTKVEGSSTLLLSACAPQAQHVKMIFPARDNMPKV CCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCE ALPEVEVHWYDGGMMPERPKGFPEGKQLMGPGGGLTIFHGTKDTLICGCYGEQPFLLSGR ECCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEECCCCCEEEECC VPNAPKVCRRVTCSHEMDWVRACKEDKSNRVMPKADFSESGPMNEMVVMGVLAIRLQGLN CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KTLEWDGANMCFTNIGDNETLRTCIKDGFTIHDGHPSFNKTWTDPINAKQFAAELVKHNY CEEECCCCCEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH REGWKLPDMPR HCCCCCCCCCC >Mature Secondary Structure SDFSRRKFLKTGAAALAGITIAPSSILGMSHGHVSPTDKLNLAAVGIGGMGHANINNVK CCHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC GTENIVALCDVDWKYAKGVFDEFPNAKKYWDYRKMYDEMGKSIDGVIIATADHTHAIITA CCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEE DAMTMGKHVYCQKPLTHSVYESRLLTKLAASTGVVTQMGNQGASGEGTDLVCEWIWNGEI CHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEEECCCC GEVTKVECATDRPIWPQGLNAPEKADRIPNTLNWDLFTGPAKLNPYNNVYHPWNWRGWWD CCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEC YGTGALGDMACHILHQPFRALKLGYPTKVEGSSTLLLSACAPQAQHVKMIFPARDNMPKV CCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCE ALPEVEVHWYDGGMMPERPKGFPEGKQLMGPGGGLTIFHGTKDTLICGCYGEQPFLLSGR ECCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEECCCCCEEEECC VPNAPKVCRRVTCSHEMDWVRACKEDKSNRVMPKADFSESGPMNEMVVMGVLAIRLQGLN CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KTLEWDGANMCFTNIGDNETLRTCIKDGFTIHDGHPSFNKTWTDPINAKQFAAELVKHNY CEEECCCCCEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH REGWKLPDMPR HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA