| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347505
Identifier: 29347505
GI number: 29347505
Start: 2627193
End: 2628260
Strand: Reverse
Name: 29347505
Synonym: BT_2095
Alternate gene names: NA
Gene position: 2628260-2627193 (Counterclockwise)
Preceding gene: 29347506
Following gene: 29347504
Centisome position: 41.98
GC content: 40.45
Gene sequence:
>1068_bases ATGAAACGAATTTTACTTTCTGTTTTATTTATTGTCTTCTGTCTGACGGCTTTTGTCGGTTGTATGAAATGGGATTATGG CAAGATGGAGCCTTTCAGGGCTACAGGAGATGGACTTTTCATTATGAATGAGGGGAATTTTCAATACGGTAATGCTACCT TATCTTATTATGATCCGGAAACGAAAAAGGTGGAGAATGAGATCTTTTACCGGGCTAATGCGATGAAGTTGGGTGATGTA GCGCAATCAATGATTGTCCGGGATACTATTGGATGGGTGGTAGTGAATAATTCTCATGTAATCTTCGCTATTAGCACCAA TACATTCAAAGAGGTGGGACGCATTACGGGACTTACTTCTCCACGCTATATTCATTTTATTTCGGATGAGAAAGCTTATA TTACACAAATATGGGATTATCGTATTTTTATTGTCAATCCCAAAACTTATCAGATAACCGGATATATCGAATGTCCGGAT ATGACGATGGAAACAGGCTCGACAGAGCAAATGGTGCAGTATGGCAAGTATGTGTATGTGAATTGCTGGTCTTATCAGAA TCGTATATTAAAGATAGATACTACAACGGACAAGGTGGTAGATCAGCTTACTGTAGGTATACAACCTACTTCTCTAGTGA TGGATAAGAACTTCAAGATGTGGACGATTACTGATGGAGGGTATAAAGGAAGTCCATACGGATATGAGGAGCCGTCGCTT TATCGCATTGATGCCGAGACATTTAAAATAGAGAAACAATTTAAGTTTCAGTTGGGAGATGCTCCTTCGGAAGTACAGCT TAATGGTGCGGGTGATGAGCTTTACTGGATTAACAAAGATATCTGGCGTATGTCTGTCGATGAAGAACGTGTTCCCGTAC GTCCTTTCCTCAAGTATCGTGATACGAAGTATTATGGGTTGACAGTTAGTCCGAAAAACGGAGATGTCTATGTGGCTGAC GCCATTGACTATCAGCAACAGGGGATGATTTATCGCTATACGGAGGATGGGGAACTTGTGGATGAGTTTTATGTTGGAAT TATTCCCGGAGCATTTTGTTGGAAGTAA
Upstream 100 bases:
>100_bases CAAATGCTATGTTTGATATTTGTCGCAAATCCTGATTTGCCGGCAGATGTCTGAAGAGTGATGCGACAAGTTAGTTAATA ACCTTTTCTCGCTTTTAATT
Downstream 100 bases:
>100_bases TCGGTAGAGAAGAATATGAGGAGAAATATATTATTAGTGCAGTTTGTAGGAGTTCTTTTATTACTTCCATCTATAATGAG TGGACAACAACACAGCAGCG
Product: putative surface layer protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPETKKVENEIFYRANAMKLGDV AQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTSPRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPD MTMETGSTEQMVQYGKYVYVNCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYRDTKYYGLTVSPKNGDVYVAD AIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK
Sequences:
>Translated_355_residues MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPETKKVENEIFYRANAMKLGDV AQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTSPRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPD MTMETGSTEQMVQYGKYVYVNCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYRDTKYYGLTVSPKNGDVYVAD AIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK >Mature_355_residues MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPETKKVENEIFYRANAMKLGDV AQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTSPRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPD MTMETGSTEQMVQYGKYVYVNCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYRDTKYYGLTVSPKNGDVYVAD AIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41127; Mature: 41127
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCEEECCEEEEEECCC TKKVENEIFYRANAMKLGDVAQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTS HHHHCCEEEEEECCEEHHHHHHHHHHEECCCEEEECCCEEEEEEECCHHHHHHHHCCCCC PRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPDMTMETGSTEQMVQYGKYVYV CCEEEEECCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCEECCCCHHHHHHCCCEEEE NCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL EEEECCCEEEEEECCHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCE YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYR EEEEHHHEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCHHHEEC DTKYYGLTVSPKNGDVYVADAIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK CCEEEEEEEECCCCCEEEEECCCHHHCCEEEEECCCCCCHHHHHHHHCCCHHCCC >Mature Secondary Structure MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCEEECCEEEEEECCC TKKVENEIFYRANAMKLGDVAQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTS HHHHCCEEEEEECCEEHHHHHHHHHHEECCCEEEECCCEEEEEEECCHHHHHHHHCCCCC PRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPDMTMETGSTEQMVQYGKYVYV CCEEEEECCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCEECCCCHHHHHHCCCEEEE NCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL EEEECCCEEEEEECCHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCE YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYR EEEEHHHEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCHHHEEC DTKYYGLTVSPKNGDVYVADAIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK CCEEEEEEEECCCCCEEEEECCCHHHCCEEEEECCCCCCHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA