Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347505

Identifier: 29347505

GI number: 29347505

Start: 2627193

End: 2628260

Strand: Reverse

Name: 29347505

Synonym: BT_2095

Alternate gene names: NA

Gene position: 2628260-2627193 (Counterclockwise)

Preceding gene: 29347506

Following gene: 29347504

Centisome position: 41.98

GC content: 40.45

Gene sequence:

>1068_bases
ATGAAACGAATTTTACTTTCTGTTTTATTTATTGTCTTCTGTCTGACGGCTTTTGTCGGTTGTATGAAATGGGATTATGG
CAAGATGGAGCCTTTCAGGGCTACAGGAGATGGACTTTTCATTATGAATGAGGGGAATTTTCAATACGGTAATGCTACCT
TATCTTATTATGATCCGGAAACGAAAAAGGTGGAGAATGAGATCTTTTACCGGGCTAATGCGATGAAGTTGGGTGATGTA
GCGCAATCAATGATTGTCCGGGATACTATTGGATGGGTGGTAGTGAATAATTCTCATGTAATCTTCGCTATTAGCACCAA
TACATTCAAAGAGGTGGGACGCATTACGGGACTTACTTCTCCACGCTATATTCATTTTATTTCGGATGAGAAAGCTTATA
TTACACAAATATGGGATTATCGTATTTTTATTGTCAATCCCAAAACTTATCAGATAACCGGATATATCGAATGTCCGGAT
ATGACGATGGAAACAGGCTCGACAGAGCAAATGGTGCAGTATGGCAAGTATGTGTATGTGAATTGCTGGTCTTATCAGAA
TCGTATATTAAAGATAGATACTACAACGGACAAGGTGGTAGATCAGCTTACTGTAGGTATACAACCTACTTCTCTAGTGA
TGGATAAGAACTTCAAGATGTGGACGATTACTGATGGAGGGTATAAAGGAAGTCCATACGGATATGAGGAGCCGTCGCTT
TATCGCATTGATGCCGAGACATTTAAAATAGAGAAACAATTTAAGTTTCAGTTGGGAGATGCTCCTTCGGAAGTACAGCT
TAATGGTGCGGGTGATGAGCTTTACTGGATTAACAAAGATATCTGGCGTATGTCTGTCGATGAAGAACGTGTTCCCGTAC
GTCCTTTCCTCAAGTATCGTGATACGAAGTATTATGGGTTGACAGTTAGTCCGAAAAACGGAGATGTCTATGTGGCTGAC
GCCATTGACTATCAGCAACAGGGGATGATTTATCGCTATACGGAGGATGGGGAACTTGTGGATGAGTTTTATGTTGGAAT
TATTCCCGGAGCATTTTGTTGGAAGTAA

Upstream 100 bases:

>100_bases
CAAATGCTATGTTTGATATTTGTCGCAAATCCTGATTTGCCGGCAGATGTCTGAAGAGTGATGCGACAAGTTAGTTAATA
ACCTTTTCTCGCTTTTAATT

Downstream 100 bases:

>100_bases
TCGGTAGAGAAGAATATGAGGAGAAATATATTATTAGTGCAGTTTGTAGGAGTTCTTTTATTACTTCCATCTATAATGAG
TGGACAACAACACAGCAGCG

Product: putative surface layer protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPETKKVENEIFYRANAMKLGDV
AQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTSPRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPD
MTMETGSTEQMVQYGKYVYVNCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL
YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYRDTKYYGLTVSPKNGDVYVAD
AIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK

Sequences:

>Translated_355_residues
MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPETKKVENEIFYRANAMKLGDV
AQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTSPRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPD
MTMETGSTEQMVQYGKYVYVNCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL
YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYRDTKYYGLTVSPKNGDVYVAD
AIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK
>Mature_355_residues
MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPETKKVENEIFYRANAMKLGDV
AQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTSPRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPD
MTMETGSTEQMVQYGKYVYVNCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL
YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYRDTKYYGLTVSPKNGDVYVAD
AIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41127; Mature: 41127

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCEEECCEEEEEECCC
TKKVENEIFYRANAMKLGDVAQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTS
HHHHCCEEEEEECCEEHHHHHHHHHHEECCCEEEECCCEEEEEEECCHHHHHHHHCCCCC
PRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPDMTMETGSTEQMVQYGKYVYV
CCEEEEECCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCEECCCCHHHHHHCCCEEEE
NCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL
EEEECCCEEEEEECCHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCE
YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYR
EEEEHHHEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCHHHEEC
DTKYYGLTVSPKNGDVYVADAIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK
CCEEEEEEEECCCCCEEEEECCCHHHCCEEEEECCCCCCHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MKRILLSVLFIVFCLTAFVGCMKWDYGKMEPFRATGDGLFIMNEGNFQYGNATLSYYDPE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCEEECCEEEEEECCC
TKKVENEIFYRANAMKLGDVAQSMIVRDTIGWVVVNNSHVIFAISTNTFKEVGRITGLTS
HHHHCCEEEEEECCEEHHHHHHHHHHEECCCEEEECCCEEEEEEECCHHHHHHHHCCCCC
PRYIHFISDEKAYITQIWDYRIFIVNPKTYQITGYIECPDMTMETGSTEQMVQYGKYVYV
CCEEEEECCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCEECCCCHHHHHHCCCEEEE
NCWSYQNRILKIDTTTDKVVDQLTVGIQPTSLVMDKNFKMWTITDGGYKGSPYGYEEPSL
EEEECCCEEEEEECCHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCE
YRIDAETFKIEKQFKFQLGDAPSEVQLNGAGDELYWINKDIWRMSVDEERVPVRPFLKYR
EEEEHHHEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCHHHEEC
DTKYYGLTVSPKNGDVYVADAIDYQQQGMIYRYTEDGELVDEFYVGIIPGAFCWK
CCEEEEEEEECCCCCEEEEECCCHHHCCEEEEECCCCCCHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA