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The map label for this gene is farR [C]

Identifier: 29347506

GI number: 29347506

Start: 2628782

End: 2629759

Strand: Reverse

Name: farR [C]

Synonym: BT_2096

Alternate gene names: 29347506

Gene position: 2629759-2628782 (Counterclockwise)

Preceding gene: 29347513

Following gene: 29347505

Centisome position: 42.01

GC content: 35.89

Gene sequence:

>978_bases
ATGAAAAGCAATAAATCAAAATATAAGTTGGTAGTTGATTATGTGATCGACGGGATTAATGAAGGACGATTAAAGAAAGG
TGCCTGGATACCTTCTCTTAATGAATTTAGAGAAATGTACGGCTTGTCTCGTGATACTGTTTTTTCCGGAATACGAGAAT
TGAAATCGAGAGGTATCATTAAATCGAATCCTGGAGTCGGGTATTATATCGTAAGTACGCGTGTTCCGTTCAAACACAAT
ATATTTCTGCTTTTCAATGAGTTCAATGAATTTAAAGAAGATATTTATAATTCTTTTATGGAGACAGTAGGCAATTCAGC
TACTGTTGATCTTTATTTTCATAACTATAATCGGAAGGTGTTTGAGACTTTGGTGAATAATGCAAACCATAAATATACTA
CCTATATTATAATGTCCGGCAAATTTGCCGATATTGGTCCTTTACTGGAGAGTTTATCCGGAAACGTATTTCTACTCGAT
CATTATCACTCGGAATTGAAAGGGAAATATTCGTCTGTATTCCAGAACTTTGAAAAAGATACTTATGAAGCATTAGTGTA
TGGTCTGTCCAACTTGCGAAAGTACAAGCATATTGTAATGGTTCAGAAAGATTCGAAAGAACCTTTTGAACGTTATGACG
GATTACGGGCTTTTTGTAAAGAGCATGGCTTTACGCATGAGTGCATTGGCGAAATTCAGGGAAGGGAGATTGTAAAGCAG
GAGGTGTTTATGGTTGTTAATGATAGAGACTTGGTCAATTTGTTGAAGCAGGCTGACCGTCAGCAGTTAGTTCCGGGAAA
AGATTTCGGTATTATATCTTATAATGATACCCCTTTGAAAGAAGTGCTGGCAGGAGGGATTACTACTCTTTCTACTGATT
TCAAATTGATGGGACGCACGATGGCTTCTCTTATTAATAAAAAAACGATTGAGACAATTGAGAATCCTTGGAATTTAAAT
ATTCGTAATTCACTATAA

Upstream 100 bases:

>100_bases
CTTTTTGACTAGTACGAACTGGTCTGTATGTTGTAAAACACATACCACTCCGTACCAGTATGGCTGTGATATTTGTATCT
TTGCGCAAAAATAACGAACG

Downstream 100 bases:

>100_bases
AGACTATCTATCCTATATTTATCATATATACATGTTCATAGTGACGTCATTTTAAAAGATTCTGTTCATCAGATTTGTTC
CTGTTAAAAAAAAGACAGGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Gntr Family

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKSNKSKYKLVVDYVIDGINEGRLKKGAWIPSLNEFREMYGLSRDTVFSGIRELKSRGIIKSNPGVGYYIVSTRVPFKHN
IFLLFNEFNEFKEDIYNSFMETVGNSATVDLYFHNYNRKVFETLVNNANHKYTTYIIMSGKFADIGPLLESLSGNVFLLD
HYHSELKGKYSSVFQNFEKDTYEALVYGLSNLRKYKHIVMVQKDSKEPFERYDGLRAFCKEHGFTHECIGEIQGREIVKQ
EVFMVVNDRDLVNLLKQADRQQLVPGKDFGIISYNDTPLKEVLAGGITTLSTDFKLMGRTMASLINKKTIETIENPWNLN
IRNSL

Sequences:

>Translated_325_residues
MKSNKSKYKLVVDYVIDGINEGRLKKGAWIPSLNEFREMYGLSRDTVFSGIRELKSRGIIKSNPGVGYYIVSTRVPFKHN
IFLLFNEFNEFKEDIYNSFMETVGNSATVDLYFHNYNRKVFETLVNNANHKYTTYIIMSGKFADIGPLLESLSGNVFLLD
HYHSELKGKYSSVFQNFEKDTYEALVYGLSNLRKYKHIVMVQKDSKEPFERYDGLRAFCKEHGFTHECIGEIQGREIVKQ
EVFMVVNDRDLVNLLKQADRQQLVPGKDFGIISYNDTPLKEVLAGGITTLSTDFKLMGRTMASLINKKTIETIENPWNLN
IRNSL
>Mature_325_residues
MKSNKSKYKLVVDYVIDGINEGRLKKGAWIPSLNEFREMYGLSRDTVFSGIRELKSRGIIKSNPGVGYYIVSTRVPFKHN
IFLLFNEFNEFKEDIYNSFMETVGNSATVDLYFHNYNRKVFETLVNNANHKYTTYIIMSGKFADIGPLLESLSGNVFLLD
HYHSELKGKYSSVFQNFEKDTYEALVYGLSNLRKYKHIVMVQKDSKEPFERYDGLRAFCKEHGFTHECIGEIQGREIVKQ
EVFMVVNDRDLVNLLKQADRQQLVPGKDFGIISYNDTPLKEVLAGGITTLSTDFKLMGRTMASLINKKTIETIENPWNLN
IRNSL

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37493; Mature: 37493

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNKSKYKLVVDYVIDGINEGRLKKGAWIPSLNEFREMYGLSRDTVFSGIRELKSRGII
CCCCCCHHHEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
KSNPGVGYYIVSTRVPFKHNIFLLFNEFNEFKEDIYNSFMETVGNSATVDLYFHNYNRKV
ECCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHH
FETLVNNANHKYTTYIIMSGKFADIGPLLESLSGNVFLLDHYHSELKGKYSSVFQNFEKD
HHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEECHHHHHCCHHHHHHHHHHHH
TYEALVYGLSNLRKYKHIVMVQKDSKEPFERYDGLRAFCKEHGFTHECIGEIQGREIVKQ
HHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EVFMVVNDRDLVNLLKQADRQQLVPGKDFGIISYNDTPLKEVLAGGITTLSTDFKLMGRT
HHHEEECCHHHHHHHHHCCHHHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHH
MASLINKKTIETIENPWNLNIRNSL
HHHHHHHHHHHHHCCCCCEEECCCC
>Mature Secondary Structure
MKSNKSKYKLVVDYVIDGINEGRLKKGAWIPSLNEFREMYGLSRDTVFSGIRELKSRGII
CCCCCCHHHEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
KSNPGVGYYIVSTRVPFKHNIFLLFNEFNEFKEDIYNSFMETVGNSATVDLYFHNYNRKV
ECCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHH
FETLVNNANHKYTTYIIMSGKFADIGPLLESLSGNVFLLDHYHSELKGKYSSVFQNFEKD
HHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEECHHHHHCCHHHHHHHHHHHH
TYEALVYGLSNLRKYKHIVMVQKDSKEPFERYDGLRAFCKEHGFTHECIGEIQGREIVKQ
HHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EVFMVVNDRDLVNLLKQADRQQLVPGKDFGIISYNDTPLKEVLAGGITTLSTDFKLMGRT
HHHEEECCHHHHHHHHHCCHHHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHH
MASLINKKTIETIENPWNLNIRNSL
HHHHHHHHHHHHHCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA