| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ilvC [H]
Identifier: 29347484
GI number: 29347484
Start: 2599081
End: 2600160
Strand: Reverse
Name: ilvC [H]
Synonym: BT_2074
Alternate gene names: 29347484
Gene position: 2600160-2599081 (Counterclockwise)
Preceding gene: 29347485
Following gene: 29347482
Centisome position: 41.53
GC content: 45.0
Gene sequence:
>1080_bases ATGGCGCAAGTCATCAAAACAAAAAAACAAAAAAAAATGGCACAGTTGAATTTTGGCGGAACTGTAGAAAATGTAGTTAT CCGTGATGAATTTCCATTGGAAAAAGCTCGTGAAGTATTGAAAAATGAAACAATCGCTGTAATCGGTTATGGCGTACAAG GTCCTGGACAGGCTCTGAACCTTCGTGATAACGGTTTCAATGTAATCGTTGGTCAACGCCAGGGAAAGACATATGACAAA GCGGTAGCTGACGGATGGGTTCCGGGTGAAACTTTGTTCGGTATTGAAGAAGCTTGCGAAAAAGGTACGATCATTATGTG CCTGTTGTCTGATGCAGCGGTAATGTCTGTATGGCCTACTATCAAGCCTTACCTGACTGCAGGAAAAGCTCTTTATTTCT CTCATGGTTTTGCTATTACATGGAGTGATCGCACAGGTGTAGTTCCTCCTGCAGATATCGACGTAATCATGGTTGCTCCT AAAGGTTCGGGTACATCCTTGCGTACTATGTTCCTTGAAGGTCGCGGCTTGAACTCTTCTTACGCTATCTATCAGGATGC AACAGGCAACGCTATGGACAGAACAATCGCATTGGGTATCGGTATCGGTTCAGGTTATTTGTTCGAAACAACTTTCATCC GCGAAGCTACTTCCGACCTGACAGGCGAACGTGGTTCATTGATGGGAGCTATCCAGGGTCTGTTGCTGGCACAATACGAA GTGTTACGTGAAAACGGTCACACTCCTTCCGAAGCATTCAACGAAACTGTAGAAGAGCTGACTCAGTCATTGATGCCGTT GTTTGCAAAGAACGGTATGGACTGGATGTATGCTAACTGCTCTACTACAGCTCAACGTGGTGCTCTCGACTGGATGGGCC CCTTCCACGATGCTATCAAACCGGTAGTTGAAAAGTTGTATCACAGTGTGAAGACTGGTAACGAAGCACAGATTTCAATC GACTCTAACTCCAAACCGGATTATCGTGAGAAACTGGAAGAAGAACTGAAAGCATTGCGCGAAAGCGAAATGTGGCAGAC TGCCGTGACAGTTCGTAAACTTCGTCCGGAAAATAATTAA
Upstream 100 bases:
>100_bases AACGAGTTTCATGTAGAGGTGAAGAAAAACGGCAGCGAGGTAGTATGCCGTTCCAAAGTGATATTTGAATAATATAGAGT ATAAAATCAATTAATAACAG
Downstream 100 bases:
>100_bases TCAGACTTATACTATATAAGTTTTTCAAAAGGCGGGAAAAGCGTATTTTCCCGCTTTTTCTATGTAGATACCGGTCTTTT GAGTAATAGAAAAAGGATGA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAQVIKTKKQKKMAQLNFGGTVENVVIRDEFPLEKAREVLKNETIAVIGYGVQGPGQALNLRDNGFNVIVGQRQGKTYDK AVADGWVPGETLFGIEEACEKGTIIMCLLSDAAVMSVWPTIKPYLTAGKALYFSHGFAITWSDRTGVVPPADIDVIMVAP KGSGTSLRTMFLEGRGLNSSYAIYQDATGNAMDRTIALGIGIGSGYLFETTFIREATSDLTGERGSLMGAIQGLLLAQYE VLRENGHTPSEAFNETVEELTQSLMPLFAKNGMDWMYANCSTTAQRGALDWMGPFHDAIKPVVEKLYHSVKTGNEAQISI DSNSKPDYREKLEEELKALRESEMWQTAVTVRKLRPENN
Sequences:
>Translated_359_residues MAQVIKTKKQKKMAQLNFGGTVENVVIRDEFPLEKAREVLKNETIAVIGYGVQGPGQALNLRDNGFNVIVGQRQGKTYDK AVADGWVPGETLFGIEEACEKGTIIMCLLSDAAVMSVWPTIKPYLTAGKALYFSHGFAITWSDRTGVVPPADIDVIMVAP KGSGTSLRTMFLEGRGLNSSYAIYQDATGNAMDRTIALGIGIGSGYLFETTFIREATSDLTGERGSLMGAIQGLLLAQYE VLRENGHTPSEAFNETVEELTQSLMPLFAKNGMDWMYANCSTTAQRGALDWMGPFHDAIKPVVEKLYHSVKTGNEAQISI DSNSKPDYREKLEEELKALRESEMWQTAVTVRKLRPENN >Mature_358_residues AQVIKTKKQKKMAQLNFGGTVENVVIRDEFPLEKAREVLKNETIAVIGYGVQGPGQALNLRDNGFNVIVGQRQGKTYDKA VADGWVPGETLFGIEEACEKGTIIMCLLSDAAVMSVWPTIKPYLTAGKALYFSHGFAITWSDRTGVVPPADIDVIMVAPK GSGTSLRTMFLEGRGLNSSYAIYQDATGNAMDRTIALGIGIGSGYLFETTFIREATSDLTGERGSLMGAIQGLLLAQYEV LRENGHTPSEAFNETVEELTQSLMPLFAKNGMDWMYANCSTTAQRGALDWMGPFHDAIKPVVEKLYHSVKTGNEAQISID SNSKPDYREKLEEELKALRESEMWQTAVTVRKLRPENN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=300, Percent_Identity=27.6666666666667, Blast_Score=96, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6323387, Length=347, Percent_Identity=59.9423631123919, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 39463; Mature: 39332
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVIKTKKQKKMAQLNFGGTVENVVIRDEFPLEKAREVLKNETIAVIGYGVQGPGQALN CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEE LRDNGFNVIVGQRQGKTYDKAVADGWVPGETLFGIEEACEKGTIIMCLLSDAAVMSVWPT EECCCEEEEEECCCCCCHHHHHHCCCCCCHHHHCHHHHHCCCCEEEEEECCCHHHHHCCC IKPYLTAGKALYFSHGFAITWSDRTGVVPPADIDVIMVAPKGSGTSLRTMFLEGRGLNSS HHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCC YAIYQDATGNAMDRTIALGIGIGSGYLFETTFIREATSDLTGERGSLMGAIQGLLLAQYE EEEEECCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VLRENGHTPSEAFNETVEELTQSLMPLFAKNGMDWMYANCSTTAQRGALDWMGPFHDAIK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCHHHHHHH PVVEKLYHSVKTGNEAQISIDSNSKPDYREKLEEELKALRESEMWQTAVTVRKLRPENN HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQVIKTKKQKKMAQLNFGGTVENVVIRDEFPLEKAREVLKNETIAVIGYGVQGPGQALN CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEE LRDNGFNVIVGQRQGKTYDKAVADGWVPGETLFGIEEACEKGTIIMCLLSDAAVMSVWPT EECCCEEEEEECCCCCCHHHHHHCCCCCCHHHHCHHHHHCCCCEEEEEECCCHHHHHCCC IKPYLTAGKALYFSHGFAITWSDRTGVVPPADIDVIMVAPKGSGTSLRTMFLEGRGLNSS HHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCC YAIYQDATGNAMDRTIALGIGIGSGYLFETTFIREATSDLTGERGSLMGAIQGLLLAQYE EEEEECCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VLRENGHTPSEAFNETVEELTQSLMPLFAKNGMDWMYANCSTTAQRGALDWMGPFHDAIK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCHHHHHHH PVVEKLYHSVKTGNEAQISIDSNSKPDYREKLEEELKALRESEMWQTAVTVRKLRPENN HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]