| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347485
Identifier: 29347485
GI number: 29347485
Start: 2600189
End: 2600932
Strand: Reverse
Name: 29347485
Synonym: BT_2075
Alternate gene names: NA
Gene position: 2600932-2600189 (Counterclockwise)
Preceding gene: 29347486
Following gene: 29347484
Centisome position: 41.55
GC content: 46.24
Gene sequence:
>744_bases ATGAGTGAAGAAAATAAAATAGGGACTTATCAGTTTGTGGCAGAGCCGTTTCACGTAGATTTTAACGGCCGTCTGACCAT GGGCGTGCTGGGAAATCATCTGCTGAATTGCGCAGGTTTTCATGCCAGCGACCGTGGATTTGGTATTGCTACGCTGAACG AGGACAATTACACATGGGTGCTTTCCCGCCTGGCTATCGAGCTGGATGAGATGCCTTACCAGTACGAGAAGTTCTCGGTT CAGACATGGGTGGAGAATGTCTATCGTCTCTTTACCGACCGTAACTTTGCCGTCATTGACAAGGATGGAAAGAAGATCGG CTATGCCCGTTCCGTATGGGCGATGATCAATCTGAATACCCGTAAGCCTGCCGATCTGTTGGCATTGCATGGAGGAAGCA TCGTCGATTATATATGCGATGAACCTTGCCCGATAGAAAAGCCTTCGCGTATCAAGGTGACAAGCAATCAGCCTGTTGCG ACGCTGACGGCAAAATACAGTGATATCGATATTAACGGACACGTAAACAGTATTCGTTATATCGAGCACATACTTGACTT GTTTCCGATAGAACTGTATCAGACGAAACGTATCCGCCGGTTTGAAATGGCGTATGTGGCTGAAAGTTATTTCGGAGATG AACTCTCTTTCTTCTGTGATGAGGTGAGTGAAAACGAGTTTCATGTAGAGGTGAAGAAAAACGGCAGCGAGGTAGTATGC CGTTCCAAAGTGATATTTGAATAA
Upstream 100 bases:
>100_bases CGGGCCGTGTGGCTATTACTACCAGCTGTTTCGAACGTGTGAATGAGTTCCTGGACGGACAGGAAGCGAAGTATAAGCAA AGTAAAAAGGAACAGGAGTA
Downstream 100 bases:
>100_bases TATAGAGTATAAAATCAATTAATAACAGATGGCGCAAGTCATCAAAACAAAAAAACAAAAAAAAATGGCACAGTTGAATT TTGGCGGAACTGTAGAAAAT
Product: acyl-ACP thioesterase
Products: NA
Alternate protein names: Acyl-Acyl Carrier Protein Thioesterase; Acyl-ACP Thioesterase Family Protein; AcyL-Acp Thioesterase; Acyl-[Acyl-Carrier-Protein] Thioesterase; Oleoyl-Acyl Carrier Protein Thioesterase; Acyl Carrier Protein Thioesterase-Like Protein; Acyl-ACP Thioesterase-Like; Oleoyl-[Acyl-Carrier-Protein] Hydrolase
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSEENKIGTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWVLSRLAIELDEMPYQYEKFSV QTWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMINLNTRKPADLLALHGGSIVDYICDEPCPIEKPSRIKVTSNQPVA TLTAKYSDIDINGHVNSIRYIEHILDLFPIELYQTKRIRRFEMAYVAESYFGDELSFFCDEVSENEFHVEVKKNGSEVVC RSKVIFE
Sequences:
>Translated_247_residues MSEENKIGTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWVLSRLAIELDEMPYQYEKFSV QTWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMINLNTRKPADLLALHGGSIVDYICDEPCPIEKPSRIKVTSNQPVA TLTAKYSDIDINGHVNSIRYIEHILDLFPIELYQTKRIRRFEMAYVAESYFGDELSFFCDEVSENEFHVEVKKNGSEVVC RSKVIFE >Mature_246_residues SEENKIGTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWVLSRLAIELDEMPYQYEKFSVQ TWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMINLNTRKPADLLALHGGSIVDYICDEPCPIEKPSRIKVTSNQPVAT LTAKYSDIDINGHVNSIRYIEHILDLFPIELYQTKRIRRFEMAYVAESYFGDELSFFCDEVSENEFHVEVKKNGSEVVCR SKVIFE
Specific function: Unknown
COG id: COG3884
COG function: function code I; Acyl-ACP thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28406; Mature: 28275
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEENKIGTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWV CCCCCCCCEEEEEECCEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEE LSRLAIELDEMPYQYEKFSVQTWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMINLNT EHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECC RKPADLLALHGGSIVDYICDEPCPIEKPSRIKVTSNQPVATLTAKYSDIDINGHVNSIRY CCCCCEEEECCCCEEHHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCHHHHH IEHILDLFPIELYQTKRIRRFEMAYVAESYFGDELSFFCDEVSENEFHVEVKKNGSEVVC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCEEEE RSKVIFE EEEEECC >Mature Secondary Structure SEENKIGTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWV CCCCCCCEEEEEECCEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEE LSRLAIELDEMPYQYEKFSVQTWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMINLNT EHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECC RKPADLLALHGGSIVDYICDEPCPIEKPSRIKVTSNQPVATLTAKYSDIDINGHVNSIRY CCCCCEEEECCCCEEHHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCHHHHH IEHILDLFPIELYQTKRIRRFEMAYVAESYFGDELSFFCDEVSENEFHVEVKKNGSEVVC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCEEEE RSKVIFE EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA