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The map label for this gene is 29347465

Identifier: 29347465

GI number: 29347465

Start: 2574633

End: 2575436

Strand: Reverse

Name: 29347465

Synonym: BT_2055

Alternate gene names: NA

Gene position: 2575436-2574633 (Counterclockwise)

Preceding gene: 29347466

Following gene: 29347464

Centisome position: 41.14

GC content: 42.16

Gene sequence:

>804_bases
ATGAAAAAGTTATTTGCAATTGTTGCTGTGATTGGGGCCTTTACATTTGGCTCAATTCAACTTGCTCAGGCTCAAGACGC
TCCTGCAGCAGAACAAACTGAACAACAAGCTGCTCCTGCTGCTGCTCAAGCTGCTCCGGCCGCTGCTCCTGCTGCAGAAG
AAGGTGGTATTCACAAAGAAATCAAAGTTAAATTCATCGAAGGTACTGCATCTTTCATGAGTTTGGTTGCTATTGCTTTG
GTTATCGGTTTGGCTTTCTGTATCGAACGTATCATCTATTTGAGCTTGGCTGAAATCAACACAAAAAAATTCATGGCATC
TATCGAAGCTGCTTTGGAAAAAGGTGATGTTGAAGCTGCTAAAGACATCGCACGTAACACCAGAGGTCCTGTTGCTTCTA
TCTACTACCAGGGTTTGATGAGAATCGACCAAGGTATCGATGTAGTTGAGAAGTCAGTAGTATCTTACGGTGGTGTACAG
GCTGGTTACCTTGAAAAAGGATGTTCTTGGATCACACTGTTTATCGCTATGGCTCCGTCACTCGGATTCTTGGGTACTGT
AATCGGTATGGTGCAGGCATTTGATAAGATCCAGCAGGTAGGTGATATCTCTCCGACGGTTGTTGCAGGTGGTATGAAAG
TTGCCTTGATTACAACTATTTTCGGTTTGATCGTTGCTTTGATTCTTCAGGTATTCTACAACTACGTACTTGCTAAGATT
GAAGCTCTTACAAGCGAAATGGAAGACTCTTCTATCTCTTTGCTTGACATGGTAATCAAATATGATCTGAAATACAAAAA
ATAA

Upstream 100 bases:

>100_bases
CGGGGTTCGAATCCCCGTCTCTCCGCAGAACAAAAGTTGAAACGTGAAGTAAATACAATAAATAATAATCAATTAATTAA
TCTTAAAAATTAGACACACA

Downstream 100 bases:

>100_bases
TTCGAAATGAGTAAGTTATCATATAAAGTATCGTATTACGCACTGTATGCGATGTTTGCCATCATCCTCATTGTCCTGGG
GCTTTTCTACCTGGGTGGTG

Product: putative biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKKLFAIVAVIGAFTFGSIQLAQAQDAPAAEQTEQQAAPAAAQAAPAAAPAAEEGGIHKEIKVKFIEGTASFMSLVAIAL
VIGLAFCIERIIYLSLAEINTKKFMASIEAALEKGDVEAAKDIARNTRGPVASIYYQGLMRIDQGIDVVEKSVVSYGGVQ
AGYLEKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAKI
EALTSEMEDSSISLLDMVIKYDLKYKK

Sequences:

>Translated_267_residues
MKKLFAIVAVIGAFTFGSIQLAQAQDAPAAEQTEQQAAPAAAQAAPAAAPAAEEGGIHKEIKVKFIEGTASFMSLVAIAL
VIGLAFCIERIIYLSLAEINTKKFMASIEAALEKGDVEAAKDIARNTRGPVASIYYQGLMRIDQGIDVVEKSVVSYGGVQ
AGYLEKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAKI
EALTSEMEDSSISLLDMVIKYDLKYKK
>Mature_267_residues
MKKLFAIVAVIGAFTFGSIQLAQAQDAPAAEQTEQQAAPAAAQAAPAAAPAAEEGGIHKEIKVKFIEGTASFMSLVAIAL
VIGLAFCIERIIYLSLAEINTKKFMASIEAALEKGDVEAAKDIARNTRGPVASIYYQGLMRIDQGIDVVEKSVVSYGGVQ
AGYLEKGCSWITLFIAMAPSLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAKI
EALTSEMEDSSISLLDMVIKYDLKYKK

Specific function: Unknown

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 28411; Mature: 28411

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFAIVAVIGAFTFGSIQLAQAQDAPAAEQTEQQAAPAAAQAAPAAAPAAEEGGIHKE
CHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCHHCCCCCHH
IKVKFIEGTASFMSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAALEKGDVEAA
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KDIARNTRGPVASIYYQGLMRIDQGIDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAPS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
LGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAKI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALTSEMEDSSISLLDMVIKYDLKYKK
HHHHHHHCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKLFAIVAVIGAFTFGSIQLAQAQDAPAAEQTEQQAAPAAAQAAPAAAPAAEEGGIHKE
CHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCHHCCCCCHH
IKVKFIEGTASFMSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAALEKGDVEAA
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KDIARNTRGPVASIYYQGLMRIDQGIDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAPS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
LGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAKI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALTSEMEDSSISLLDMVIKYDLKYKK
HHHHHHHCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]