| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347464
Identifier: 29347464
GI number: 29347464
Start: 2574141
End: 2574626
Strand: Reverse
Name: 29347464
Synonym: BT_2054
Alternate gene names: NA
Gene position: 2574626-2574141 (Counterclockwise)
Preceding gene: 29347465
Following gene: 29347463
Centisome position: 41.13
GC content: 40.95
Gene sequence:
>486_bases ATGAGTAAGTTATCATATAAAGTATCGTATTACGCACTGTATGCGATGTTTGCCATCATCCTCATTGTCCTGGGGCTTTT CTACCTGGGTGGTGATGCTCAAGGAGCAGATGTCATTGCGGGAGTAGATCCTGAAATGTGGCAACCGGCAAACACAAATG CCTTACTGATGCTCATTTATGGGTTATTTGGTTTGGCTGTTGCTGCTACAGTAGTTGCTGCTGTATTCCAATTTGGAGCA GCTTTGAAAGATAGCCCTGCAAATGCAATTAAGTCATTGCTTGGTTTGGTTCTTTTGGTTGTTGTTTTAGTGATTGCTTG GGCTGCAGGTGATGGAACACCGATGAATATCCCAGGTTATGACGGTACTGACAACGTTCCTTTCTGGCTGAAATTAACTG ATATGTTCCTTTATTCCATCTACATCTTGTTGTTTGTAACAATCGTTGCAATCATTGCAAGTGGCATAAAGAAAAAAATA TCATAA
Upstream 100 bases:
>100_bases TGCTAAGATTGAAGCTCTTACAAGCGAAATGGAAGACTCTTCTATCTCTTTGCTTGACATGGTAATCAAATATGATCTGA AATACAAAAAATAATTCGAA
Downstream 100 bases:
>100_bases TCAATTGAGGATACTCAATTTAATAAGTAATTACAATGGCAAGAGGAAAAAGAAAAGTTCCTGATATTAACTCAAGTTCT ACGGCGGATATCGCTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSKLSYKVSYYALYAMFAIILIVLGLFYLGGDAQGADVIAGVDPEMWQPANTNALLMLIYGLFGLAVAATVVAAVFQFGA ALKDSPANAIKSLLGLVLLVVVLVIAWAAGDGTPMNIPGYDGTDNVPFWLKLTDMFLYSIYILLFVTIVAIIASGIKKKI S
Sequences:
>Translated_161_residues MSKLSYKVSYYALYAMFAIILIVLGLFYLGGDAQGADVIAGVDPEMWQPANTNALLMLIYGLFGLAVAATVVAAVFQFGA ALKDSPANAIKSLLGLVLLVVVLVIAWAAGDGTPMNIPGYDGTDNVPFWLKLTDMFLYSIYILLFVTIVAIIASGIKKKI S >Mature_160_residues SKLSYKVSYYALYAMFAIILIVLGLFYLGGDAQGADVIAGVDPEMWQPANTNALLMLIYGLFGLAVAATVVAAVFQFGAA LKDSPANAIKSLLGLVLLVVVLVIAWAAGDGTPMNIPGYDGTDNVPFWLKLTDMFLYSIYILLFVTIVAIIASGIKKKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17175; Mature: 17044
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSYKVSYYALYAMFAIILIVLGLFYLGGDAQGADVIAGVDPEMWQPANTNALLMLIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCCCCCHHHHHHH GLFGLAVAATVVAAVFQFGAALKDSPANAIKSLLGLVLLVVVLVIAWAAGDGTPMNIPGY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGTDNVPFWLKLTDMFLYSIYILLFVTIVAIIASGIKKKIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLSYKVSYYALYAMFAIILIVLGLFYLGGDAQGADVIAGVDPEMWQPANTNALLMLIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCCCCCHHHHHHH GLFGLAVAATVVAAVFQFGAALKDSPANAIKSLLGLVLLVVVLVIAWAAGDGTPMNIPGY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGTDNVPFWLKLTDMFLYSIYILLFVTIVAIIASGIKKKIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA