| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347345
Identifier: 29347345
GI number: 29347345
Start: 2430476
End: 2432677
Strand: Reverse
Name: 29347345
Synonym: BT_1935
Alternate gene names: NA
Gene position: 2432677-2430476 (Counterclockwise)
Preceding gene: 29347346
Following gene: 29347344
Centisome position: 38.86
GC content: 40.1
Gene sequence:
>2202_bases ATGATTAAAAAAATAATATATCTGGCATTTCTTTTGCCATTGGCAGGAAATGCACAAACAACAGTCATAAAGCCATTGGT CAAACAACCTACCGCTTTTGCTATCATAACAGATAACCAAACTTATGCAAATACCAAAGATGCCATGCATCAGTACAAAA CTGCGGTTGAAGATGATGGTTTGGCAACTTATCTGATCAGCGGTGACTGGCAAAATCCAGATCAAGTCAAACAGATAATC ATCAAAACATATCAAGAATGCCCTTCATTGGAAGGTCTGGTTTTAATCGGCGATGTGCCTGTCGCATTGGTACGTAATGC GCAACACATGACTACTGCATTCAAAATGAATGAGAAAGCCTTTCCTTGGGATCAGTCTTCCGTACCTACCGACCGCTTTT ATGATGATCTGAACTTAAAGTTTGAGTTCATCAGGCAAGACTCAGTAAATCATCAGCATTTCTACTACAAATTGACAGAA GACAGTCCCCAGCGGCTAAATCCTACTTTCTATTCAGCTCGTATCAAGTATCCGGAAAAAAAGGAAGGGGATAAATATGC GGCCATTGCCTCATATCTGAAGAAAGCTGCTGCTGCCAAGGCAGATAAGCATAATCAATTAGATCGGGTATTCTCATTCA ATGGTGCTTCTTACAATTCCGATTGCCTGATTGTATGGATGGATGACGAAAAAGCTTATATGGAGAACTTTCCATTAGCT TTTGGTCGTCAAATGGGATTCAAACATTGGAACTTCCGAATGAAACACCCTATGAAATATAAGTTATTCAGCGAATTGCA ACGAAAGGACCTTGACTTATTTATGTTTCATGAACATGGAATGCCAACAGGGCAGCTTATTAATGATGAATTGGCATGCA CTGATTTCAATAATCGTTATAAAATGTTGAAGAGTACACTTTATAATGCAGTCATGTCCCATGTTGGAAAACGTGACAAA GACACCTTACGTATTCAGATGCAGGAAAAACGACAAGTGAATGAGGTGTTTTTTAAAGACCTGGACAATCCTAAGTTCTG GGAAGCAGACTCTCTTCACTACGCTGATGAACGTATCGTAACGGAAGATTTAATGAAGAGAAATCTTTCCACTAATCCGA AGATGATAATGTTTGATGCGTGCTACAACGGTTCTTTTCACGAAAACGACTATATAGCAGGACAATATATCTTTAATGAC GGTCAGACATTAGTAGCACAAGGAAATACCCGTAACGTATTGCAAGACCGCTGGACTATTGAAATGATTGGTTTGTTGTC CCATGGTGTACGAGCCGGGCAATACAATAAGCTAATCGCATCACTTGAAGGTCATTTGTTTGGTGATCCCACTTTCCGTT TTGCTCCTATCGAAGCCAATACTTTAAGTACCGATATAACAATACACAAAGATGACAAAGCCTATTGGAAGAATTTGTTA AACAGCCCATACGCTGATGTACAAAGTTTGGCCATGCGTATGCTGGCTGACGCCGATACCCAAAAGGAATTATCTCCGTT GCTCCTGAAGAAGTACCGGGAAAGTGGCTTCAATACGGTTCGTATGGAAGCTATCAAGTTGTTGAGCCGTTATCAGGACG ACAACTTCATCGAAGCATTACGCGAAGGTTTGAACGATACTTATGAAATGGTAGCTCGCCAAAGTGCCATTTATGCTGGA TTTGTAGGTGACGATTCCTTATTGCCCGCTATTGTGGAAGCATTGGTCGAACATAATGAACGCTTACGCGTACAAATGAG TGCCAACAAGGCTTTAAGCCTTTATCCGAAAGAGAAAGTAGAAAAGACAATAGAAGACTTTTATGCAAAAGTTGACCGTT TGAATGAAAACGAAGAGAAAAAACGATTACTAAGAAGCCTGGAAAGAATGTTTGTACAAGAGGCAAAAGTCCATCAGACC TTGATGGATGTAGCTGCACCGGAAGCAAAACGTATCAGTGCAATCCGCAATGTGCGTAACTATACATTCCATTTCCACGT GGATGATTATTTGAATGTAATTCGTGATGCCGGTAATCCACAGGAAGTACGTGTAGTAATGGCCGAAGCATTAGGTTGGT TTACTAATTCTGTACAACGGCCACACATTCTTGAAGAAATAAAGAAGATGCAACAAACAGCCAATCTTCCGGAAGATTTA AAAGCAGAGCTTGAACAGACAATCAAAAGATTAAGTTTATAA
Upstream 100 bases:
>100_bases CCTTCGGGTATGCGATCAACTGAGAAAAGATAAGAGCTTATCCGAGAACCTTCGTGAAGAAGCCGACCGTACATATTACA GACTTAAAAATTAATTGGCC
Downstream 100 bases:
>100_bases ATATGAATAAATACATCCTTTTGGCAATTACCGCTTTGTGCTTACAGGATATGCAGGCGCAAACAGTTGTACATCCTAGT ATAAAAACAAAGACTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MIKKIIYLAFLLPLAGNAQTTVIKPLVKQPTAFAIITDNQTYANTKDAMHQYKTAVEDDGLATYLISGDWQNPDQVKQII IKTYQECPSLEGLVLIGDVPVALVRNAQHMTTAFKMNEKAFPWDQSSVPTDRFYDDLNLKFEFIRQDSVNHQHFYYKLTE DSPQRLNPTFYSARIKYPEKKEGDKYAAIASYLKKAAAAKADKHNQLDRVFSFNGASYNSDCLIVWMDDEKAYMENFPLA FGRQMGFKHWNFRMKHPMKYKLFSELQRKDLDLFMFHEHGMPTGQLINDELACTDFNNRYKMLKSTLYNAVMSHVGKRDK DTLRIQMQEKRQVNEVFFKDLDNPKFWEADSLHYADERIVTEDLMKRNLSTNPKMIMFDACYNGSFHENDYIAGQYIFND GQTLVAQGNTRNVLQDRWTIEMIGLLSHGVRAGQYNKLIASLEGHLFGDPTFRFAPIEANTLSTDITIHKDDKAYWKNLL NSPYADVQSLAMRMLADADTQKELSPLLLKKYRESGFNTVRMEAIKLLSRYQDDNFIEALREGLNDTYEMVARQSAIYAG FVGDDSLLPAIVEALVEHNERLRVQMSANKALSLYPKEKVEKTIEDFYAKVDRLNENEEKKRLLRSLERMFVQEAKVHQT LMDVAAPEAKRISAIRNVRNYTFHFHVDDYLNVIRDAGNPQEVRVVMAEALGWFTNSVQRPHILEEIKKMQQTANLPEDL KAELEQTIKRLSL
Sequences:
>Translated_733_residues MIKKIIYLAFLLPLAGNAQTTVIKPLVKQPTAFAIITDNQTYANTKDAMHQYKTAVEDDGLATYLISGDWQNPDQVKQII IKTYQECPSLEGLVLIGDVPVALVRNAQHMTTAFKMNEKAFPWDQSSVPTDRFYDDLNLKFEFIRQDSVNHQHFYYKLTE DSPQRLNPTFYSARIKYPEKKEGDKYAAIASYLKKAAAAKADKHNQLDRVFSFNGASYNSDCLIVWMDDEKAYMENFPLA FGRQMGFKHWNFRMKHPMKYKLFSELQRKDLDLFMFHEHGMPTGQLINDELACTDFNNRYKMLKSTLYNAVMSHVGKRDK DTLRIQMQEKRQVNEVFFKDLDNPKFWEADSLHYADERIVTEDLMKRNLSTNPKMIMFDACYNGSFHENDYIAGQYIFND GQTLVAQGNTRNVLQDRWTIEMIGLLSHGVRAGQYNKLIASLEGHLFGDPTFRFAPIEANTLSTDITIHKDDKAYWKNLL NSPYADVQSLAMRMLADADTQKELSPLLLKKYRESGFNTVRMEAIKLLSRYQDDNFIEALREGLNDTYEMVARQSAIYAG FVGDDSLLPAIVEALVEHNERLRVQMSANKALSLYPKEKVEKTIEDFYAKVDRLNENEEKKRLLRSLERMFVQEAKVHQT LMDVAAPEAKRISAIRNVRNYTFHFHVDDYLNVIRDAGNPQEVRVVMAEALGWFTNSVQRPHILEEIKKMQQTANLPEDL KAELEQTIKRLSL >Mature_733_residues MIKKIIYLAFLLPLAGNAQTTVIKPLVKQPTAFAIITDNQTYANTKDAMHQYKTAVEDDGLATYLISGDWQNPDQVKQII IKTYQECPSLEGLVLIGDVPVALVRNAQHMTTAFKMNEKAFPWDQSSVPTDRFYDDLNLKFEFIRQDSVNHQHFYYKLTE DSPQRLNPTFYSARIKYPEKKEGDKYAAIASYLKKAAAAKADKHNQLDRVFSFNGASYNSDCLIVWMDDEKAYMENFPLA FGRQMGFKHWNFRMKHPMKYKLFSELQRKDLDLFMFHEHGMPTGQLINDELACTDFNNRYKMLKSTLYNAVMSHVGKRDK DTLRIQMQEKRQVNEVFFKDLDNPKFWEADSLHYADERIVTEDLMKRNLSTNPKMIMFDACYNGSFHENDYIAGQYIFND GQTLVAQGNTRNVLQDRWTIEMIGLLSHGVRAGQYNKLIASLEGHLFGDPTFRFAPIEANTLSTDITIHKDDKAYWKNLL NSPYADVQSLAMRMLADADTQKELSPLLLKKYRESGFNTVRMEAIKLLSRYQDDNFIEALREGLNDTYEMVARQSAIYAG FVGDDSLLPAIVEALVEHNERLRVQMSANKALSLYPKEKVEKTIEDFYAKVDRLNENEEKKRLLRSLERMFVQEAKVHQT LMDVAAPEAKRISAIRNVRNYTFHFHVDDYLNVIRDAGNPQEVRVVMAEALGWFTNSVQRPHILEEIKKMQQTANLPEDL KAELEQTIKRLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84884; Mature: 84884
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIIYLAFLLPLAGNAQTTVIKPLVKQPTAFAIITDNQTYANTKDAMHQYKTAVEDDG CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC LATYLISGDWQNPDQVKQIIIKTYQECPSLEGLVLIGDVPVALVRNAQHMTTAFKMNEKA CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCHHHHHHHCCCCCC FPWDQSSVPTDRFYDDLNLKFEFIRQDSVNHQHFYYKLTEDSPQRLNPTFYSARIKYPEK CCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCC KEGDKYAAIASYLKKAAAAKADKHNQLDRVFSFNGASYNSDCLIVWMDDEKAYMENFPLA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHH FGRQMGFKHWNFRMKHPMKYKLFSELQRKDLDLFMFHEHGMPTGQLINDELACTDFNNRY HHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCHHHH KMLKSTLYNAVMSHVGKRDKDTLRIQMQEKRQVNEVFFKDLDNPKFWEADSLHYADERIV HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH TEDLMKRNLSTNPKMIMFDACYNGSFHENDYIAGQYIFNDGQTLVAQGNTRNVLQDRWTI HHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHHH EMIGLLSHGVRAGQYNKLIASLEGHLFGDPTFRFAPIEANTLSTDITIHKDDKAYWKNLL HHHHHHHCCCCCCHHHHHHHHHCCCEECCCCEEEECCCCCCCEEEEEEECCCHHHHHHHH NSPYADVQSLAMRMLADADTQKELSPLLLKKYRESGFNTVRMEAIKLLSRYQDDNFIEAL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH REGLNDTYEMVARQSAIYAGFVGDDSLLPAIVEALVEHNERLRVQMSANKALSLYPKEKV HHHCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCCHHHH EKTIEDFYAKVDRLNENEEKKRLLRSLERMFVQEAKVHQTLMDVAAPEAKRISAIRNVRN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC YTFHFHVDDYLNVIRDAGNPQEVRVVMAEALGWFTNSVQRPHILEEIKKMQQTANLPEDL CEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH KAELEQTIKRLSL HHHHHHHHHHHCC >Mature Secondary Structure MIKKIIYLAFLLPLAGNAQTTVIKPLVKQPTAFAIITDNQTYANTKDAMHQYKTAVEDDG CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC LATYLISGDWQNPDQVKQIIIKTYQECPSLEGLVLIGDVPVALVRNAQHMTTAFKMNEKA CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCHHHHHHHCCCCCC FPWDQSSVPTDRFYDDLNLKFEFIRQDSVNHQHFYYKLTEDSPQRLNPTFYSARIKYPEK CCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCC KEGDKYAAIASYLKKAAAAKADKHNQLDRVFSFNGASYNSDCLIVWMDDEKAYMENFPLA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHH FGRQMGFKHWNFRMKHPMKYKLFSELQRKDLDLFMFHEHGMPTGQLINDELACTDFNNRY HHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCHHHH KMLKSTLYNAVMSHVGKRDKDTLRIQMQEKRQVNEVFFKDLDNPKFWEADSLHYADERIV HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH TEDLMKRNLSTNPKMIMFDACYNGSFHENDYIAGQYIFNDGQTLVAQGNTRNVLQDRWTI HHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHHH EMIGLLSHGVRAGQYNKLIASLEGHLFGDPTFRFAPIEANTLSTDITIHKDDKAYWKNLL HHHHHHHCCCCCCHHHHHHHHHCCCEECCCCEEEECCCCCCCEEEEEEECCCHHHHHHHH NSPYADVQSLAMRMLADADTQKELSPLLLKKYRESGFNTVRMEAIKLLSRYQDDNFIEAL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH REGLNDTYEMVARQSAIYAGFVGDDSLLPAIVEALVEHNERLRVQMSANKALSLYPKEKV HHHCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCCHHHH EKTIEDFYAKVDRLNENEEKKRLLRSLERMFVQEAKVHQTLMDVAAPEAKRISAIRNVRN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC YTFHFHVDDYLNVIRDAGNPQEVRVVMAEALGWFTNSVQRPHILEEIKKMQQTANLPEDL CEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH KAELEQTIKRLSL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA