| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347344
Identifier: 29347344
GI number: 29347344
Start: 2428281
End: 2430425
Strand: Reverse
Name: 29347344
Synonym: BT_1934
Alternate gene names: NA
Gene position: 2430425-2428281 (Counterclockwise)
Preceding gene: 29347345
Following gene: 29347342
Centisome position: 38.82
GC content: 40.05
Gene sequence:
>2145_bases ATGCAGGCGCAAACAGTTGTACATCCTAGTATAAAAACAAAGACTACTTTTGCAATTGTAGTCGATCAGAAAAGTTATGA TGAAGCGAAAAGTGAAATTGATGCTTATCGTACCAGTATAGAAAAAGAAGGTTTAGGTACTTACTTGCTAATTGATGATT GGAAAAGGCCCGAACCTATTCGTGAGCAACTTGTCAAATTGCATGAGAATGAGAAAACGCCTTTGGAGGGTTGCGTATTT ATAGGTGACATCCCTATTCCAATGATTCGTGATGCACATCATCTATCTTCGGCTTTCAAAAGGTCTCCCAAAGCCAATTG GCAGAAATCAAGCGTTCCTTCCGACCGTTATTATGATGACTTCGGATTAAAATTTGATTATATTAAACAAGACAGTTTGA TACCTGACTATCATTATATGACATTGCGTGCTGATTCTAAACAGTATATTTCACCGGATATTTATTCGGCCCGTATCCGT CCATTACATTTAGAAGGTGAGAACCGTTATCAGATGCTACGCGATTACTTAAAAAAGGCAGTTGCCGAAAAAGCAAAGCA AAATGCATTTGACCAACTGACTATGGCCCGTGGCCATGGTTACAATTCTGAAGATCCTTTGGCATGGAGCGGTGAGCAAA TAGCCTTACGTGAGCAATTGCCGCAAATATTCAAATCGGGTAATACAGTGAAGTTCTATGATTTTAACATGCGCTATCCG ATGAAACCATTATACTTGAACGAGATTCAGCGCGAAGGATTAGATGTCATGCTATTCCATCACCACGGTGGCCCCACCAT GCAGTATATCAATGGCTATGAAAATGGTTCCGGTATTAATTTGAGTATTGAGAATGCCAAAATATTCTTGCGAAGCAAAG TGCCTTCATACGCCAAGAAACATGGGCGTGAAGCTGCTATCAAAGAATATGCCAAGCAGTATGGGGTGCCTGAAAGTTGG TGTGCGGAAGCTTTCGATGAGGAGAAAATAAAATCGGATTCCATTGTAAACCGTAATATGGATATCTATACTGAAGATAT TCGTCTTTTGACTCCTAATGCGCGTTTTATATTGTTCGATGCTTGTTTCAACGGTTCTTTCCATTTGGATGACAACATTG TAGGCTCTTATATATTCAATAAGGGTAAGACCATTGCTACTATGGGATGTACGGTTAACACCATTCAAGATAAATGGCCG GATGAATTTCTCGGCTTGTTAGCTGCCGGTATGCGCATCGGGCAGTTCACTCGTTTTACCTGCTTCTTGGAAAATCATCT GATCGGTGACCCGACTTTTCACTTCACCAATAATGCCGGGCTGGATATGGACATCAACCAAGCTTTAGTTGCGCAGGAAG GAAATGTTACATTCTGGAAAAAACAGCTGAATTCCCCTATGGCTGACATGCAGGCAATGGCGCTCCGTCAATTGTCAATG GCAAATTATAGTGGTCTCGTTGAGTTGCTGAAGAAAAGTTACCACGAATCGAACTATTTCGTTGTGCGGTTGGAAGCATT ACGCCTATTAGCTTTGAACTATCCGACAGAGGTTGCCGATGTATTGCAGACAGCCATGAACGACAGTTATGAACTGATCC GTCGTTATGCGGTGGAATACGTTGAAAAGAATTGCAATCCGGAATTGTTGCCGGCATGGATAGAAAGCTATTTATTACGC GGACATGAAAACCGCCATCGTTTCAGAATTTTTAGTGCTATCAACACGTTCGACCATGATATGGCTTTGAATGAATTGAA GAAACAGGCTGCCGATTGGTCTTTCTACGATTCTTCCTATGTGAATGAATTGTTAGAATACCTTCCTCGCCAAAAGAAAG GACTTGAAAGAGATTTTGCACTTATTGACAGTCCGGAAAGTACTACCAAACAGATACAAAGCGAAATAAGTAGGTTCCGA AATAAACCTATTGCTAAAGCTATTGAGCCATTACTGAACATTATAAAAAATGAAAGCCAAGAAGAAGAACTTCGCATATT GGCTGCTGAAACATTAGGCTGGTATAATTTATACTATAATAAAGCAGATATAATCAAAGAACTTAACACATTTAGAACTT CCAATCAAAAGCTAATGAACGAAGTTACCAAAACAATTAATAGGCTGAAAAGTCAAAATAGGTAG
Upstream 100 bases:
>100_bases AAGATTTAAAAGCAGAGCTTGAACAGACAATCAAAAGATTAAGTTTATAAATATGAATAAATACATCCTTTTGGCAATTA CCGCTTTGTGCTTACAGGAT
Downstream 100 bases:
>100_bases AATCATCCAAACGATGAGATAGACCGGATCCAAAGGGCGGTTCTGCCATTCCTGAGCAGCCTGGTTGACTTTGTTCGTGA TGATGGAAATAGCTGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 714; Mature: 714
Protein sequence:
>714_residues MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPIREQLVKLHENEKTPLEGCVF IGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDDFGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIR PLHLEGENRYQMLRDYLKKAVAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKKHGREAAIKEYAKQYGVPESW CAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFDACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWP DEFLGLLAAGMRIGQFTRFTCFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEYVEKNCNPELLPAWIESYLLR GHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSYVNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFR NKPIAKAIEPLLNIIKNESQEEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR
Sequences:
>Translated_714_residues MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPIREQLVKLHENEKTPLEGCVF IGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDDFGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIR PLHLEGENRYQMLRDYLKKAVAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKKHGREAAIKEYAKQYGVPESW CAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFDACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWP DEFLGLLAAGMRIGQFTRFTCFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEYVEKNCNPELLPAWIESYLLR GHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSYVNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFR NKPIAKAIEPLLNIIKNESQEEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR >Mature_714_residues MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPIREQLVKLHENEKTPLEGCVF IGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDDFGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIR PLHLEGENRYQMLRDYLKKAVAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKKHGREAAIKEYAKQYGVPESW CAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFDACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWP DEFLGLLAAGMRIGQFTRFTCFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEYVEKNCNPELLPAWIESYLLR GHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSYVNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFR NKPIAKAIEPLLNIIKNESQEEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82701; Mature: 82701
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPI CCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH REQLVKLHENEKTPLEGCVFIGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDD HHHHHHHHCCCCCCCCCEEEECCCCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC FGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIRPLHLEGENRYQMLRDYLKKA CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHCCEEEEEECCCCHHHHHHHHHHHH VAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKK CCCHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCEEEEEECCEEEEECCCCHHHHH HGREAAIKEYAKQYGVPESWCAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEECCEEEECCCCCEEEEE ACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWPDEFLGLLAAGMRIGQFTRFT EECCCCEEECCCHHHHHHHCCCCEEEEECCEEECHHHCCHHHHHHHHHHHHHHCCHHEEE CFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM EEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEY HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH VEKNCNPELLPAWIESYLLRGHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSY HHHCCCCCHHHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFRNKPIAKAIEPLLNIIKNESQ HHHHHHHCCHHHCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC EEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR HHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPI CCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH REQLVKLHENEKTPLEGCVFIGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDD HHHHHHHHCCCCCCCCCEEEECCCCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC FGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIRPLHLEGENRYQMLRDYLKKA CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHCCEEEEEECCCCHHHHHHHHHHHH VAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKK CCCHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCEEEEEECCEEEEECCCCHHHHH HGREAAIKEYAKQYGVPESWCAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEECCEEEECCCCCEEEEE ACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWPDEFLGLLAAGMRIGQFTRFT EECCCCEEECCCHHHHHHHCCCCEEEEECCEEECHHHCCHHHHHHHHHHHHHHCCHHEEE CFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM EEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEY HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH VEKNCNPELLPAWIESYLLRGHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSY HHHCCCCCHHHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFRNKPIAKAIEPLLNIIKNESQ HHHHHHHCCHHHCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC EEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR HHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA