Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347344

Identifier: 29347344

GI number: 29347344

Start: 2428281

End: 2430425

Strand: Reverse

Name: 29347344

Synonym: BT_1934

Alternate gene names: NA

Gene position: 2430425-2428281 (Counterclockwise)

Preceding gene: 29347345

Following gene: 29347342

Centisome position: 38.82

GC content: 40.05

Gene sequence:

>2145_bases
ATGCAGGCGCAAACAGTTGTACATCCTAGTATAAAAACAAAGACTACTTTTGCAATTGTAGTCGATCAGAAAAGTTATGA
TGAAGCGAAAAGTGAAATTGATGCTTATCGTACCAGTATAGAAAAAGAAGGTTTAGGTACTTACTTGCTAATTGATGATT
GGAAAAGGCCCGAACCTATTCGTGAGCAACTTGTCAAATTGCATGAGAATGAGAAAACGCCTTTGGAGGGTTGCGTATTT
ATAGGTGACATCCCTATTCCAATGATTCGTGATGCACATCATCTATCTTCGGCTTTCAAAAGGTCTCCCAAAGCCAATTG
GCAGAAATCAAGCGTTCCTTCCGACCGTTATTATGATGACTTCGGATTAAAATTTGATTATATTAAACAAGACAGTTTGA
TACCTGACTATCATTATATGACATTGCGTGCTGATTCTAAACAGTATATTTCACCGGATATTTATTCGGCCCGTATCCGT
CCATTACATTTAGAAGGTGAGAACCGTTATCAGATGCTACGCGATTACTTAAAAAAGGCAGTTGCCGAAAAAGCAAAGCA
AAATGCATTTGACCAACTGACTATGGCCCGTGGCCATGGTTACAATTCTGAAGATCCTTTGGCATGGAGCGGTGAGCAAA
TAGCCTTACGTGAGCAATTGCCGCAAATATTCAAATCGGGTAATACAGTGAAGTTCTATGATTTTAACATGCGCTATCCG
ATGAAACCATTATACTTGAACGAGATTCAGCGCGAAGGATTAGATGTCATGCTATTCCATCACCACGGTGGCCCCACCAT
GCAGTATATCAATGGCTATGAAAATGGTTCCGGTATTAATTTGAGTATTGAGAATGCCAAAATATTCTTGCGAAGCAAAG
TGCCTTCATACGCCAAGAAACATGGGCGTGAAGCTGCTATCAAAGAATATGCCAAGCAGTATGGGGTGCCTGAAAGTTGG
TGTGCGGAAGCTTTCGATGAGGAGAAAATAAAATCGGATTCCATTGTAAACCGTAATATGGATATCTATACTGAAGATAT
TCGTCTTTTGACTCCTAATGCGCGTTTTATATTGTTCGATGCTTGTTTCAACGGTTCTTTCCATTTGGATGACAACATTG
TAGGCTCTTATATATTCAATAAGGGTAAGACCATTGCTACTATGGGATGTACGGTTAACACCATTCAAGATAAATGGCCG
GATGAATTTCTCGGCTTGTTAGCTGCCGGTATGCGCATCGGGCAGTTCACTCGTTTTACCTGCTTCTTGGAAAATCATCT
GATCGGTGACCCGACTTTTCACTTCACCAATAATGCCGGGCTGGATATGGACATCAACCAAGCTTTAGTTGCGCAGGAAG
GAAATGTTACATTCTGGAAAAAACAGCTGAATTCCCCTATGGCTGACATGCAGGCAATGGCGCTCCGTCAATTGTCAATG
GCAAATTATAGTGGTCTCGTTGAGTTGCTGAAGAAAAGTTACCACGAATCGAACTATTTCGTTGTGCGGTTGGAAGCATT
ACGCCTATTAGCTTTGAACTATCCGACAGAGGTTGCCGATGTATTGCAGACAGCCATGAACGACAGTTATGAACTGATCC
GTCGTTATGCGGTGGAATACGTTGAAAAGAATTGCAATCCGGAATTGTTGCCGGCATGGATAGAAAGCTATTTATTACGC
GGACATGAAAACCGCCATCGTTTCAGAATTTTTAGTGCTATCAACACGTTCGACCATGATATGGCTTTGAATGAATTGAA
GAAACAGGCTGCCGATTGGTCTTTCTACGATTCTTCCTATGTGAATGAATTGTTAGAATACCTTCCTCGCCAAAAGAAAG
GACTTGAAAGAGATTTTGCACTTATTGACAGTCCGGAAAGTACTACCAAACAGATACAAAGCGAAATAAGTAGGTTCCGA
AATAAACCTATTGCTAAAGCTATTGAGCCATTACTGAACATTATAAAAAATGAAAGCCAAGAAGAAGAACTTCGCATATT
GGCTGCTGAAACATTAGGCTGGTATAATTTATACTATAATAAAGCAGATATAATCAAAGAACTTAACACATTTAGAACTT
CCAATCAAAAGCTAATGAACGAAGTTACCAAAACAATTAATAGGCTGAAAAGTCAAAATAGGTAG

Upstream 100 bases:

>100_bases
AAGATTTAAAAGCAGAGCTTGAACAGACAATCAAAAGATTAAGTTTATAAATATGAATAAATACATCCTTTTGGCAATTA
CCGCTTTGTGCTTACAGGAT

Downstream 100 bases:

>100_bases
AATCATCCAAACGATGAGATAGACCGGATCCAAAGGGCGGTTCTGCCATTCCTGAGCAGCCTGGTTGACTTTGTTCGTGA
TGATGGAAATAGCTGATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPIREQLVKLHENEKTPLEGCVF
IGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDDFGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIR
PLHLEGENRYQMLRDYLKKAVAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP
MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKKHGREAAIKEYAKQYGVPESW
CAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFDACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWP
DEFLGLLAAGMRIGQFTRFTCFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM
ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEYVEKNCNPELLPAWIESYLLR
GHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSYVNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFR
NKPIAKAIEPLLNIIKNESQEEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR

Sequences:

>Translated_714_residues
MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPIREQLVKLHENEKTPLEGCVF
IGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDDFGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIR
PLHLEGENRYQMLRDYLKKAVAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP
MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKKHGREAAIKEYAKQYGVPESW
CAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFDACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWP
DEFLGLLAAGMRIGQFTRFTCFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM
ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEYVEKNCNPELLPAWIESYLLR
GHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSYVNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFR
NKPIAKAIEPLLNIIKNESQEEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR
>Mature_714_residues
MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPIREQLVKLHENEKTPLEGCVF
IGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDDFGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIR
PLHLEGENRYQMLRDYLKKAVAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP
MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKKHGREAAIKEYAKQYGVPESW
CAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFDACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWP
DEFLGLLAAGMRIGQFTRFTCFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM
ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEYVEKNCNPELLPAWIESYLLR
GHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSYVNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFR
NKPIAKAIEPLLNIIKNESQEEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82701; Mature: 82701

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPI
CCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
REQLVKLHENEKTPLEGCVFIGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDD
HHHHHHHHCCCCCCCCCEEEECCCCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
FGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIRPLHLEGENRYQMLRDYLKKA
CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHCCEEEEEECCCCHHHHHHHHHHHH
VAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC
MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKK
CCCHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCEEEEEECCEEEEECCCCHHHHH
HGREAAIKEYAKQYGVPESWCAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEECCEEEECCCCCEEEEE
ACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWPDEFLGLLAAGMRIGQFTRFT
EECCCCEEECCCHHHHHHHCCCCEEEEECCEEECHHHCCHHHHHHHHHHHHHHCCHHEEE
CFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM
EEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEY
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
VEKNCNPELLPAWIESYLLRGHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSY
HHHCCCCCHHHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFRNKPIAKAIEPLLNIIKNESQ
HHHHHHHCCHHHCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
EEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR
HHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQAQTVVHPSIKTKTTFAIVVDQKSYDEAKSEIDAYRTSIEKEGLGTYLLIDDWKRPEPI
CCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
REQLVKLHENEKTPLEGCVFIGDIPIPMIRDAHHLSSAFKRSPKANWQKSSVPSDRYYDD
HHHHHHHHCCCCCCCCCEEEECCCCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
FGLKFDYIKQDSLIPDYHYMTLRADSKQYISPDIYSARIRPLHLEGENRYQMLRDYLKKA
CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHCCEEEEEECCCCHHHHHHHHHHHH
VAEKAKQNAFDQLTMARGHGYNSEDPLAWSGEQIALREQLPQIFKSGNTVKFYDFNMRYP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC
MKPLYLNEIQREGLDVMLFHHHGGPTMQYINGYENGSGINLSIENAKIFLRSKVPSYAKK
CCCHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCEEEEEECCEEEEECCCCHHHHH
HGREAAIKEYAKQYGVPESWCAEAFDEEKIKSDSIVNRNMDIYTEDIRLLTPNARFILFD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEECCEEEECCCCCEEEEE
ACFNGSFHLDDNIVGSYIFNKGKTIATMGCTVNTIQDKWPDEFLGLLAAGMRIGQFTRFT
EECCCCEEECCCHHHHHHHCCCCEEEEECCEEECHHHCCHHHHHHHHHHHHHHCCHHEEE
CFLENHLIGDPTFHFTNNAGLDMDINQALVAQEGNVTFWKKQLNSPMADMQAMALRQLSM
EEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
ANYSGLVELLKKSYHESNYFVVRLEALRLLALNYPTEVADVLQTAMNDSYELIRRYAVEY
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
VEKNCNPELLPAWIESYLLRGHENRHRFRIFSAINTFDHDMALNELKKQAADWSFYDSSY
HHHCCCCCHHHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VNELLEYLPRQKKGLERDFALIDSPESTTKQIQSEISRFRNKPIAKAIEPLLNIIKNESQ
HHHHHHHCCHHHCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
EEELRILAAETLGWYNLYYNKADIIKELNTFRTSNQKLMNEVTKTINRLKSQNR
HHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA