Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347346

Identifier: 29347346

GI number: 29347346

Start: 2432684

End: 2434831

Strand: Reverse

Name: 29347346

Synonym: BT_1936

Alternate gene names: NA

Gene position: 2434831-2432684 (Counterclockwise)

Preceding gene: 29347347

Following gene: 29347345

Centisome position: 38.89

GC content: 41.81

Gene sequence:

>2148_bases
ATGCTCTGCAGCATATTATCTCTGCGGGCACAGACATTTGTTAAACCGGCTGTGAAAGTAAAGGACACCTCTTTTGCTGT
AATTACAGATAAAGGGACATTTCAGGCTTGTGAAGCCGAGCTTAAAGCCTATCAGGAGATTCTAGGAATGGAAGGGTTGC
CTACGTTCATCGTATACAATGAATGGAATAAACCGGAAGATGTAAAGAAAGTTATTGTTAAGCTCTACAAAAAGGATAAA
TTGGAAGGAGTGGTATTTGTCGGTGATATCCCTATTCCAATGCTCCGCAAAGCCCAGCATATGACTTCCGCTTTTAAAAT
GGATGAGAAAAACAATGACTGGAGAGATTCTTCAGTGCCCAGCGACCGTTTCTACGATGATTTCGACCTACAATTCGATT
TTTTGAAACAGGACAGTGTCGAAAATAATTTCTTCTATTATAATTTGGCTATAAAATCTCCACAGCAAATTCGGTGTGAC
ATATATTCTGCACGTGTCAAAGCTGTTGATAACGGCGAAGAACCGCATGCGCAAATCAGCCGCTATTTTAAAAAAGTGGT
GGCTGAGCACCAGATAAACAATAAATTAGACCAATTCTTCTCCTATACAGGTGATGGCTCTTACTCTAACTCATTGACTG
CATGGACACCGGAAACCTTTACTATTCGCGAACAAATGCCGGGCGTATTCGATAAAGAGGGACGGGCCCGTTTCATCCGT
TATAATTTCAGCGATTATCCCAAGGACGATGTCATTAATATGCTGAAACGCACAGATCTGGACTTGTCTATTTTTCATGA
GCATGGTATGCCCGAACGTCAATATCTTTCCGGTAGTCCCGCTACTAATAGGTGGAATGCTCATGTAGATGCAATGAAGT
ACTATTATCGTGGTTTAGCGCGTAGAAAGCAAAACAACAAAAAGTCTTTCGACGAAATGCTGGATATGATGAAAAACACA
TACGGTTTGGACACTACTTGGATTGCAGGCTATGATGATCCCAAAGTAATTGCAGAAGATTCTTTACTAGACCTGCGCAC
CGGTATTATCCTGTCGGAAGTTACAGAGTTTAAGCCTAATAGCCGTATGGTAATTTTCGATGCATGCTATAATGGTGATT
TCCGGGAAAAAGATTACATTGCCGGACGTTATATCATGTCGGAAGGAAAATGCGTAACTACTTTTGCCAATTCAGTCAAT
GTACTGCAAGATAAAATGGCAAACGAGATGCTCGGCCTGTTAGGTATGGGAGCACGAGTGGGGCAATGGGCTAAATTGAC
GAATATTCTCGAATCGCACATTACCGGTGACCCTACTCTACGTTTTCAATCTATCAATGAGGTAGATGCCAATGCTTTGT
TCAAAGAACCATATAGCGAGTCCCGCATGTTGGAGTTATTACAGTCGCCCTATGCCGACATACAGAATTTTGCTTTGCAC
AACCTTTATCGCAATGACTATCCGGGTATTTCTGATTTATTAAGAAAAACTTTTGAAACTTCCTCGTTCATGATGGTACG
TTTCACCTGCTTGGCATTGCTTGAGAAGATTAGTGACAAAAACTTCCGGGAAGTCTTACACTTGGCCATTACGGATTCCT
ATGAATTTATTCGTCGCACCTCTGTTCGTATGATGCAACATGTGGGACTGAACGAGTATGTTTATCCGCAAATCAAAGCC
TATGTAGAAGACAACCTATCCGAGCGTGTGGCATTTAATGTGAGTTTGGGGCTTCAAGTCTTTGATCAGGCAGCCGTACA
GGCGGCAATTGATAAAGTAATGGCTGAGACCTATGTGTTGCAAGACAAGGAGGAGATGCGTAAGGTTTTGGAGAATGCCA
ATAATAGTCGTAGCATGCAAAAAGAGTTATTAAGCAAAGAAACTTCCGAACGTTGGCGCATCCTTTATTGCAATTCTCTG
AAAAATCATATGGCACATGCCTGTGTAGACGGCCTCTTGGCTTTACTTACCGACTCCAGTGAAAGTGAAAAGCTAAAAAC
CTGTTTATTGGAGGCTTTTGCTTGGTTCACTCATTCTTATCGGAAGCCTGACATCCTTCGGGTATGCGATCAACTGAGAA
AAGATAAGAGCTTATCCGAGAACCTTCGTGAAGAAGCCGACCGTACATATTACAGACTTAAAAATTAA

Upstream 100 bases:

>100_bases
TGGGCGTACTCATTTATCGATAAGTTTAGGATGTAATTTTTAATGCTACATAACGAAATCTATATTACAAAACATGCGTA
AATTAATAACTGGAAGTTTG

Downstream 100 bases:

>100_bases
TTGGCCATGATTAAAAAAATAATATATCTGGCATTTCTTTTGCCATTGGCAGGAAATGCACAAACAACAGTCATAAAGCC
ATTGGTCAAACAACCTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYNEWNKPEDVKKVIVKLYKKDK
LEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVPSDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCD
IYSARVKAVDNGEEPHAQISRYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR
YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLARRKQNNKKSFDEMLDMMKNT
YGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPNSRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVN
VLQDKMANEMLGLLGMGARVGQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH
NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRTSVRMMQHVGLNEYVYPQIKA
YVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVLQDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSL
KNHMAHACVDGLLALLTDSSESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN

Sequences:

>Translated_715_residues
MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYNEWNKPEDVKKVIVKLYKKDK
LEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVPSDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCD
IYSARVKAVDNGEEPHAQISRYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR
YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLARRKQNNKKSFDEMLDMMKNT
YGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPNSRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVN
VLQDKMANEMLGLLGMGARVGQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH
NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRTSVRMMQHVGLNEYVYPQIKA
YVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVLQDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSL
KNHMAHACVDGLLALLTDSSESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN
>Mature_715_residues
MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYNEWNKPEDVKKVIVKLYKKDK
LEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVPSDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCD
IYSARVKAVDNGEEPHAQISRYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR
YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLARRKQNNKKSFDEMLDMMKNT
YGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPNSRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVN
VLQDKMANEMLGLLGMGARVGQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH
NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRTSVRMMQHVGLNEYVYPQIKA
YVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVLQDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSL
KNHMAHACVDGLLALLTDSSESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82889; Mature: 82889

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYN
CCCHHHHHHHHHHHCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
EWNKPEDVKKVIVKLYKKDKLEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVP
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCDIYSARVKAVDNGEEPHAQIS
CCCCCCCCCCEEHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHH
RYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCCEEEEE
YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLA
ECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RRKQNNKKSFDEMLDMMKNTYGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPN
HHHHCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
SRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVNVLQDKMANEMLGLLGMGARV
CCEEEEEECCCCCCCCCCHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
GQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH
HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH
NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRT
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
SVRMMQHVGLNEYVYPQIKAYVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVL
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
QDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSLKNHMAHACVDGLLALLTDSS
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
ESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYN
CCCHHHHHHHHHHHCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
EWNKPEDVKKVIVKLYKKDKLEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVP
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCDIYSARVKAVDNGEEPHAQIS
CCCCCCCCCCEEHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHH
RYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCCEEEEE
YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLA
ECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RRKQNNKKSFDEMLDMMKNTYGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPN
HHHHCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
SRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVNVLQDKMANEMLGLLGMGARV
CCEEEEEECCCCCCCCCCHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
GQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH
HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH
NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRT
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
SVRMMQHVGLNEYVYPQIKAYVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVL
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
QDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSLKNHMAHACVDGLLALLTDSS
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
ESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA