| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347336
Identifier: 29347336
GI number: 29347336
Start: 2415368
End: 2416234
Strand: Reverse
Name: 29347336
Synonym: BT_1926
Alternate gene names: NA
Gene position: 2416234-2415368 (Counterclockwise)
Preceding gene: 29347337
Following gene: 29347335
Centisome position: 38.6
GC content: 44.75
Gene sequence:
>867_bases ATGATAAAGAAACTATGCACATTACTTTTGCTGACCTGTATAACAGCTGCGCCTTCATTGGCGCAGCGTTACAGCAGCAG TGATGATGCGTCGTTTGCTCCGAAGAAAGGACAGTGGCAGGTTTCGGTTTTACTTGGTAGCGGAAAGTTCTTCAATGAGA ACACCTCTTATCTGCTTCCCAAGTTCACCAACACCGAAGGAGTCGTCGGACTTCCCAATGGAGGAACGGATAACTCCGGT GACCTGAACCGCTATCTGAATATCGGTAGTCTGAATAATAATAGTCTGGTCAATATAGCCGGAATCGAAGGCAAGTATTT TCTGTCTGACAACTGGGACATCAATTTCCAGTTTAGCATGAACATCAGCCTGACTCCCAAGAAAGACTATGTAGAAGGCG ACAACAGTGTACCCGATATGATCATACCCGCGCAAAGTTATATCAATGCGCAGATGACTAATAACTGGTATACCTCTGTC GGCTCCAACTATTACTTCAAGACTCGCAACGAACGTATTCATCCATACGTAGGAGGCGCCCTTGGCTTCCAGATGGCACG CATTGAAACTACAGAACCATACACCGGCGATACCTATAAGGATAGCGATGATTCGGAAGAACTTCCTTCTCAGGTCTATA CCGCAGGAAGCAAAGCCGGTCAGATGTATGGTCTGAAAGTAGCTGCCGTAGCAGGTATCGAGTATAGCATTGCCAAAGGA TTTATTTTCGGGTTCGAGATGCATCCTTTAGCTTATCGCTATGATTTGATACAAATTTGTCCGAAAGGATTTGATAAGTA CAATGTCAGTCACCATAACATCAAGATTTTCGAAATGCCTGTGGTGAAACTTGGCTTCAGATTCTGA
Upstream 100 bases:
>100_bases ATGATGTAGCGAAAGCAATCTATGATACTGCTCTTGCACAAGTTAAATCCGTATTGGAAACCTTGAGTAAGTAATTTCTT AATCACGTAAAAGTAACAAA
Downstream 100 bases:
>100_bases CGAACAATGATTATACAAATGTATAAATGAAAAGTGAAAGCCGCTCTGCTGGTATTGGCGGGCGGCTTTTCTTTCTTTTC AAGAAGAAATAAAAGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MIKKLCTLLLLTCITAAPSLAQRYSSSDDASFAPKKGQWQVSVLLGSGKFFNENTSYLLPKFTNTEGVVGLPNGGTDNSG DLNRYLNIGSLNNNSLVNIAGIEGKYFLSDNWDINFQFSMNISLTPKKDYVEGDNSVPDMIIPAQSYINAQMTNNWYTSV GSNYYFKTRNERIHPYVGGALGFQMARIETTEPYTGDTYKDSDDSEELPSQVYTAGSKAGQMYGLKVAAVAGIEYSIAKG FIFGFEMHPLAYRYDLIQICPKGFDKYNVSHHNIKIFEMPVVKLGFRF
Sequences:
>Translated_288_residues MIKKLCTLLLLTCITAAPSLAQRYSSSDDASFAPKKGQWQVSVLLGSGKFFNENTSYLLPKFTNTEGVVGLPNGGTDNSG DLNRYLNIGSLNNNSLVNIAGIEGKYFLSDNWDINFQFSMNISLTPKKDYVEGDNSVPDMIIPAQSYINAQMTNNWYTSV GSNYYFKTRNERIHPYVGGALGFQMARIETTEPYTGDTYKDSDDSEELPSQVYTAGSKAGQMYGLKVAAVAGIEYSIAKG FIFGFEMHPLAYRYDLIQICPKGFDKYNVSHHNIKIFEMPVVKLGFRF >Mature_288_residues MIKKLCTLLLLTCITAAPSLAQRYSSSDDASFAPKKGQWQVSVLLGSGKFFNENTSYLLPKFTNTEGVVGLPNGGTDNSG DLNRYLNIGSLNNNSLVNIAGIEGKYFLSDNWDINFQFSMNISLTPKKDYVEGDNSVPDMIIPAQSYINAQMTNNWYTSV GSNYYFKTRNERIHPYVGGALGFQMARIETTEPYTGDTYKDSDDSEELPSQVYTAGSKAGQMYGLKVAAVAGIEYSIAKG FIFGFEMHPLAYRYDLIQICPKGFDKYNVSHHNIKIFEMPVVKLGFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32089; Mature: 32089
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKLCTLLLLTCITAAPSLAQRYSSSDDASFAPKKGQWQVSVLLGSGKFFNENTSYLLP CHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCEEEE KFTNTEGVVGLPNGGTDNSGDLNRYLNIGSLNNNSLVNIAGIEGKYFLSDNWDINFQFSM EECCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEECCCCEEEEEEEE NISLTPKKDYVEGDNSVPDMIIPAQSYINAQMTNNWYTSVGSNYYFKTRNERIHPYVGGA EEEECCCHHCCCCCCCCCCEEECCHHHEEEEECCCEEECCCCCEEEEECCCEECCEECHH LGFQMARIETTEPYTGDTYKDSDDSEELPSQVYTAGSKAGQMYGLKVAAVAGIEYSIAKG HCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEECCE FIFGFEMHPLAYRYDLIQICPKGFDKYNVSHHNIKIFEMPVVKLGFRF EEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEECCCCC >Mature Secondary Structure MIKKLCTLLLLTCITAAPSLAQRYSSSDDASFAPKKGQWQVSVLLGSGKFFNENTSYLLP CHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCEEEE KFTNTEGVVGLPNGGTDNSGDLNRYLNIGSLNNNSLVNIAGIEGKYFLSDNWDINFQFSM EECCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEECCCCEEEEEEEE NISLTPKKDYVEGDNSVPDMIIPAQSYINAQMTNNWYTSVGSNYYFKTRNERIHPYVGGA EEEECCCHHCCCCCCCCCCEEECCHHHEEEEECCCEEECCCCCEEEEECCCEECCEECHH LGFQMARIETTEPYTGDTYKDSDDSEELPSQVYTAGSKAGQMYGLKVAAVAGIEYSIAKG HCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEECCE FIFGFEMHPLAYRYDLIQICPKGFDKYNVSHHNIKIFEMPVVKLGFRF EEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA