Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347337

Identifier: 29347337

GI number: 29347337

Start: 2416261

End: 2419047

Strand: Reverse

Name: 29347337

Synonym: BT_1927

Alternate gene names: NA

Gene position: 2419047-2416261 (Counterclockwise)

Preceding gene: 29347340

Following gene: 29347336

Centisome position: 38.64

GC content: 39.36

Gene sequence:

>2787_bases
ATGGCGGGTACGACAGCTACATTCACGGGATGTATTGATACCGATGAACCGGAAGGTATCGTTGATCTGCGGGGAGCAAA
ATCCGAACTGATTAAAGCACAGGCTGCGGTAAAACTGGTGGAAGTGGAATGGCAAAAAGCGCAAGTAGCTTATCAGGAAC
TGGTAAACAAATCTAAAGAATTGGATAATCAGTACAAAGAGTACGATGTTCAGATGCATGCTTTAGACGTGAAACTGAAA
GAACTGGAAGTAGAACGCGCACAAGCTGCTACCGAACAAGCAAAAGCTGAGGCGGAAGCTAAGATTGCTGAAGCTAACAG
AAACAAAGCTTACTGGGAAAATAAAATGGCTGAAGAAGCTGAAATCTTCAAAGCAGCTATGTTGAACTATCAGACTCAGA
CAGCACAGGCACAGGAAGCTTATGATAATGCAATGAAACTCATTGAAGCTGGAAAACTTCTGCTTTCTGATGGAGAAAAA
GCAATTATTGATAAAGCACAGCAAAGACTTTATGTTGCTTCTGCTAGCCTGAACCAATATTACACTGCCTTAAAGACAGC
TCAGGATAATTATTATGATGCATTGGTTAATCCTAATCTTCCGACATTAGCTAGCTTACAGGCTGAATTGAAGTTGGCAC
AGATTGCAGTTGAAAAGGCAGAAATCTTATTGGATGAGAAAAATAATATGTTAGCTTTGGCAGAAGACTTTGATGCAGCT
GCATGGGATGATAAGATCCTGGATCTGAAGAAGAAGAAATCTGAATATGAAAGTGAAAAGAGCAAAGCTGATGTTGAGAT
CGCTACTATTAAGACTTCCGCAGATTATAAAGCTGCAGAACAAAAAGTAGCCGAAAAGATAAAAGCGCGTAAAGCTGCTA
AAGAGGCATATGATAAAGCTGTAGCAGACTCTACAACACAGGTTAATACTCAGCTTGATATTGCAGCTTATAAATCTGAA
CCTATTAATGAAGGATTGAAGACATTATTTAGTAGTAGCAATGATTTTACATCTTTAGATGGATATACTGTTAGTACGGG
TGTGTTTGATTATCCGGCTGTTCAGTATACACAAACTGAGTACAATGCTGATTTGAAAATAGAAGATGTAACAGCCAGAA
CTAGTCAGGCATCTCTTACTCTGATGAAAGTAAATGCCTGGATTGATGCTTTAGGTAAATATTCTGTAGACGAAAATGGA
GTTGAATGGAATAAGTTGACTTTGGCAGAAAAAGAAAAGACAGCCAAAAATGCTAAAGAAAAATTTGAAAAGGATAAAGC
TAACTGGGAAATTTCTGCAAAAGCGGTAAAAGGTACAGCAACTACAGTGCCAACTACTGATCTGAAAAAGGCGACAGATA
CTTATAATTCTTCTTATGCCGCAGTAGAATCTGCAGTAAAAGCTTATAATAGTGCATGGGATGCCGTATATCAAGCTGCT
TATGATGATGCTGTAGAAAAAGAAAAAGCTTCGGTATTGGAGAAAACATACCGTGACAATATGATTACCGCATTGTCTCC
TACTAGTAAGGCTGCATGGGATGCATTGACTCCTGCTGAACAAACTACCAGTAAACTGGAAGCTATATTGGACGATACAG
TGAAACAAGCTAAAGCAAAGGCTGATGCTAATGCTACTTTGGCTGAATGGCTGAAACTTGATCAGACTGTTGCTGAATTG
GCTGCCAAAGGTGAAGCTGCAGGAAATCAAGCTCTTGCCGATGATAAAGATAAGAAAGTAGAAAAGGCTAAAGCTGCATT
GGTTAAAGCTGCTGGAGAGGCTGCTACTGCTGTTGCTAAGGTGGCTCCTGCAATTAGTACTTATTCTGCTCTTGCTGCTA
ATCCTTATGGTCAGATACTGGCTAATACAGTTAGTGTTGAAGATATGACAGGCAAAGATGCTTTCTATAAAGAAGAGGAA
AAAGATGGTAAGAAAACTGGCCACATGCAGGCATTACGCTCTGATATTTCTGCAGATGAATTTACTAAATTAAGTGCAAC
TAAGTTAGATCGCAATACAGCTGAAGATGCTTTAGAGTATACTTCTGATGCTACTTTTGGTACTGTGATTCCTGGCGAAG
ACAGACTTGTTGAAGTAACAGAAGCAATGGTCCGCGCTTATATTAAGCAGAATAATAGTGCTGTTTTGACTGACTTTGGT
ACTTTGGGAGCTATGATGGCTGCTAATGACGATGTACAGACTTGCAAAGATATGATTGCTGCTGCCGATTTGATTAAACC
ATTGAAGGCTCAAATGGAAGGTGTACTTGCTGATCTGAATGCAGAAATAAATACGAATACTGCTTTAATGGATCCGTTTA
TTGCAAAAGCTGACGAAACTCGTATTGCTCTGAAGACTGCTAAAGAAGAGGTGAAGAAAGCACAAGAAGAACAAGATGCT
TTGACTGCTGAAGCTGAGGCCAATAGTAAGAAGTTTGCTGAATTGATCCAAGATTACATTGGCTTGATCAGTGTTGTTCA
AGATCAGATTGATGGTATCAACGGTGGTGTTGTCACTGGTTCTGTGGTAACTGTAGAATCTGTTCTGAATTATTGGAAGA
ATCAAGTTGCTACTCAGGAAAAATCAGTTGAAGAAGCTAAACAGAAGGTTACTGCAGCAGAAAAGAGCATTGAACTGTTC
AACAAGGGTGAATACAAGGAAGCTTATGTAATAGAACAGAAGAAACTTGCTTTGGAAACAGCTCAAGAAGCTTATGATGT
AGCGAAAGCAATCTATGATACTGCTCTTGCACAAGTTAAATCCGTATTGGAAACCTTGAGTAAGTAA

Upstream 100 bases:

>100_bases
GGATTATGAAATGACAGCAAACAAATTTTTTATTTATTAATTGTATAACATTTAATTTACTTTTATGAGAAAATGGACGT
ATTTGGTCGCAACCTTGCTA

Downstream 100 bases:

>100_bases
TTTCTTAATCACGTAAAAGTAACAAAATGATAAAGAAACTATGCACATTACTTTTGCTGACCTGTATAACAGCTGCGCCT
TCATTGGCGCAGCGTTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 928; Mature: 927

Protein sequence:

>928_residues
MAGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKELDNQYKEYDVQMHALDVKLK
ELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEAEIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEK
AIIDKAQQRLYVASASLNQYYTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA
AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKAVADSTTQVNTQLDIAAYKSE
PINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTEYNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENG
VEWNKLTLAEKEKTAKNAKEKFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA
YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAKADANATLAEWLKLDQTVAEL
AAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAKVAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEE
KDGKKTGHMQALRSDISADEFTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG
TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADETRIALKTAKEEVKKAQEEQDA
LTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTGSVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELF
NKGEYKEAYVIEQKKLALETAQEAYDVAKAIYDTALAQVKSVLETLSK

Sequences:

>Translated_928_residues
MAGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKELDNQYKEYDVQMHALDVKLK
ELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEAEIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEK
AIIDKAQQRLYVASASLNQYYTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA
AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKAVADSTTQVNTQLDIAAYKSE
PINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTEYNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENG
VEWNKLTLAEKEKTAKNAKEKFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA
YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAKADANATLAEWLKLDQTVAEL
AAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAKVAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEE
KDGKKTGHMQALRSDISADEFTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG
TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADETRIALKTAKEEVKKAQEEQDA
LTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTGSVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELF
NKGEYKEAYVIEQKKLALETAQEAYDVAKAIYDTALAQVKSVLETLSK
>Mature_927_residues
AGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKELDNQYKEYDVQMHALDVKLKE
LEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEAEIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEKA
IIDKAQQRLYVASASLNQYYTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAAA
WDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKAVADSTTQVNTQLDIAAYKSEP
INEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTEYNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENGV
EWNKLTLAEKEKTAKNAKEKFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAAY
DDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAKADANATLAEWLKLDQTVAELA
AKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAKVAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEEK
DGKKTGHMQALRSDISADEFTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFGT
LGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADETRIALKTAKEEVKKAQEEQDAL
TAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTGSVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELFN
KGEYKEAYVIEQKKLALETAQEAYDVAKAIYDTALAQVKSVLETLSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101242; Mature: 101111

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKE
CCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDNQYKEYDVQMHALDVKLKELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEA
HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEKAIIDKAQQRLYVASASLNQY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA
HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCC
AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKA
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VADSTTQVNTQLDIAAYKSEPINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTE
HHCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECC
YNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENGVEWNKLTLAEKEKTAKNAKE
CCCCEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
KFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA
HHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAK
HHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ADANATLAEWLKLDQTVAELAAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
VAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEEKDGKKTGHMQALRSDISADE
HHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHH
FTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG
HHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHH
TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADET
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCCCC
RIALKTAKEEVKKAQEEQDALTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
SVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELFNKGEYKEAYVIEQKKLALET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHH
AQEAYDVAKAIYDTALAQVKSVLETLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKE
CCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDNQYKEYDVQMHALDVKLKELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEA
HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEKAIIDKAQQRLYVASASLNQY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA
HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCC
AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKA
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VADSTTQVNTQLDIAAYKSEPINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTE
HHCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECC
YNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENGVEWNKLTLAEKEKTAKNAKE
CCCCEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
KFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA
HHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAK
HHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ADANATLAEWLKLDQTVAELAAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
VAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEEKDGKKTGHMQALRSDISADE
HHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHH
FTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG
HHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHH
TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADET
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCCCC
RIALKTAKEEVKKAQEEQDALTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
SVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELFNKGEYKEAYVIEQKKLALET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHH
AQEAYDVAKAIYDTALAQVKSVLETLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA