| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347337
Identifier: 29347337
GI number: 29347337
Start: 2416261
End: 2419047
Strand: Reverse
Name: 29347337
Synonym: BT_1927
Alternate gene names: NA
Gene position: 2419047-2416261 (Counterclockwise)
Preceding gene: 29347340
Following gene: 29347336
Centisome position: 38.64
GC content: 39.36
Gene sequence:
>2787_bases ATGGCGGGTACGACAGCTACATTCACGGGATGTATTGATACCGATGAACCGGAAGGTATCGTTGATCTGCGGGGAGCAAA ATCCGAACTGATTAAAGCACAGGCTGCGGTAAAACTGGTGGAAGTGGAATGGCAAAAAGCGCAAGTAGCTTATCAGGAAC TGGTAAACAAATCTAAAGAATTGGATAATCAGTACAAAGAGTACGATGTTCAGATGCATGCTTTAGACGTGAAACTGAAA GAACTGGAAGTAGAACGCGCACAAGCTGCTACCGAACAAGCAAAAGCTGAGGCGGAAGCTAAGATTGCTGAAGCTAACAG AAACAAAGCTTACTGGGAAAATAAAATGGCTGAAGAAGCTGAAATCTTCAAAGCAGCTATGTTGAACTATCAGACTCAGA CAGCACAGGCACAGGAAGCTTATGATAATGCAATGAAACTCATTGAAGCTGGAAAACTTCTGCTTTCTGATGGAGAAAAA GCAATTATTGATAAAGCACAGCAAAGACTTTATGTTGCTTCTGCTAGCCTGAACCAATATTACACTGCCTTAAAGACAGC TCAGGATAATTATTATGATGCATTGGTTAATCCTAATCTTCCGACATTAGCTAGCTTACAGGCTGAATTGAAGTTGGCAC AGATTGCAGTTGAAAAGGCAGAAATCTTATTGGATGAGAAAAATAATATGTTAGCTTTGGCAGAAGACTTTGATGCAGCT GCATGGGATGATAAGATCCTGGATCTGAAGAAGAAGAAATCTGAATATGAAAGTGAAAAGAGCAAAGCTGATGTTGAGAT CGCTACTATTAAGACTTCCGCAGATTATAAAGCTGCAGAACAAAAAGTAGCCGAAAAGATAAAAGCGCGTAAAGCTGCTA AAGAGGCATATGATAAAGCTGTAGCAGACTCTACAACACAGGTTAATACTCAGCTTGATATTGCAGCTTATAAATCTGAA CCTATTAATGAAGGATTGAAGACATTATTTAGTAGTAGCAATGATTTTACATCTTTAGATGGATATACTGTTAGTACGGG TGTGTTTGATTATCCGGCTGTTCAGTATACACAAACTGAGTACAATGCTGATTTGAAAATAGAAGATGTAACAGCCAGAA CTAGTCAGGCATCTCTTACTCTGATGAAAGTAAATGCCTGGATTGATGCTTTAGGTAAATATTCTGTAGACGAAAATGGA GTTGAATGGAATAAGTTGACTTTGGCAGAAAAAGAAAAGACAGCCAAAAATGCTAAAGAAAAATTTGAAAAGGATAAAGC TAACTGGGAAATTTCTGCAAAAGCGGTAAAAGGTACAGCAACTACAGTGCCAACTACTGATCTGAAAAAGGCGACAGATA CTTATAATTCTTCTTATGCCGCAGTAGAATCTGCAGTAAAAGCTTATAATAGTGCATGGGATGCCGTATATCAAGCTGCT TATGATGATGCTGTAGAAAAAGAAAAAGCTTCGGTATTGGAGAAAACATACCGTGACAATATGATTACCGCATTGTCTCC TACTAGTAAGGCTGCATGGGATGCATTGACTCCTGCTGAACAAACTACCAGTAAACTGGAAGCTATATTGGACGATACAG TGAAACAAGCTAAAGCAAAGGCTGATGCTAATGCTACTTTGGCTGAATGGCTGAAACTTGATCAGACTGTTGCTGAATTG GCTGCCAAAGGTGAAGCTGCAGGAAATCAAGCTCTTGCCGATGATAAAGATAAGAAAGTAGAAAAGGCTAAAGCTGCATT GGTTAAAGCTGCTGGAGAGGCTGCTACTGCTGTTGCTAAGGTGGCTCCTGCAATTAGTACTTATTCTGCTCTTGCTGCTA ATCCTTATGGTCAGATACTGGCTAATACAGTTAGTGTTGAAGATATGACAGGCAAAGATGCTTTCTATAAAGAAGAGGAA AAAGATGGTAAGAAAACTGGCCACATGCAGGCATTACGCTCTGATATTTCTGCAGATGAATTTACTAAATTAAGTGCAAC TAAGTTAGATCGCAATACAGCTGAAGATGCTTTAGAGTATACTTCTGATGCTACTTTTGGTACTGTGATTCCTGGCGAAG ACAGACTTGTTGAAGTAACAGAAGCAATGGTCCGCGCTTATATTAAGCAGAATAATAGTGCTGTTTTGACTGACTTTGGT ACTTTGGGAGCTATGATGGCTGCTAATGACGATGTACAGACTTGCAAAGATATGATTGCTGCTGCCGATTTGATTAAACC ATTGAAGGCTCAAATGGAAGGTGTACTTGCTGATCTGAATGCAGAAATAAATACGAATACTGCTTTAATGGATCCGTTTA TTGCAAAAGCTGACGAAACTCGTATTGCTCTGAAGACTGCTAAAGAAGAGGTGAAGAAAGCACAAGAAGAACAAGATGCT TTGACTGCTGAAGCTGAGGCCAATAGTAAGAAGTTTGCTGAATTGATCCAAGATTACATTGGCTTGATCAGTGTTGTTCA AGATCAGATTGATGGTATCAACGGTGGTGTTGTCACTGGTTCTGTGGTAACTGTAGAATCTGTTCTGAATTATTGGAAGA ATCAAGTTGCTACTCAGGAAAAATCAGTTGAAGAAGCTAAACAGAAGGTTACTGCAGCAGAAAAGAGCATTGAACTGTTC AACAAGGGTGAATACAAGGAAGCTTATGTAATAGAACAGAAGAAACTTGCTTTGGAAACAGCTCAAGAAGCTTATGATGT AGCGAAAGCAATCTATGATACTGCTCTTGCACAAGTTAAATCCGTATTGGAAACCTTGAGTAAGTAA
Upstream 100 bases:
>100_bases GGATTATGAAATGACAGCAAACAAATTTTTTATTTATTAATTGTATAACATTTAATTTACTTTTATGAGAAAATGGACGT ATTTGGTCGCAACCTTGCTA
Downstream 100 bases:
>100_bases TTTCTTAATCACGTAAAAGTAACAAAATGATAAAGAAACTATGCACATTACTTTTGCTGACCTGTATAACAGCTGCGCCT TCATTGGCGCAGCGTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 928; Mature: 927
Protein sequence:
>928_residues MAGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKELDNQYKEYDVQMHALDVKLK ELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEAEIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEK AIIDKAQQRLYVASASLNQYYTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKAVADSTTQVNTQLDIAAYKSE PINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTEYNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENG VEWNKLTLAEKEKTAKNAKEKFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAKADANATLAEWLKLDQTVAEL AAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAKVAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEE KDGKKTGHMQALRSDISADEFTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADETRIALKTAKEEVKKAQEEQDA LTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTGSVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELF NKGEYKEAYVIEQKKLALETAQEAYDVAKAIYDTALAQVKSVLETLSK
Sequences:
>Translated_928_residues MAGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKELDNQYKEYDVQMHALDVKLK ELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEAEIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEK AIIDKAQQRLYVASASLNQYYTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKAVADSTTQVNTQLDIAAYKSE PINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTEYNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENG VEWNKLTLAEKEKTAKNAKEKFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAKADANATLAEWLKLDQTVAEL AAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAKVAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEE KDGKKTGHMQALRSDISADEFTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADETRIALKTAKEEVKKAQEEQDA LTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTGSVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELF NKGEYKEAYVIEQKKLALETAQEAYDVAKAIYDTALAQVKSVLETLSK >Mature_927_residues AGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKELDNQYKEYDVQMHALDVKLKE LEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEAEIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEKA IIDKAQQRLYVASASLNQYYTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAAA WDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKAVADSTTQVNTQLDIAAYKSEP INEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTEYNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENGV EWNKLTLAEKEKTAKNAKEKFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAAY DDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAKADANATLAEWLKLDQTVAELA AKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAKVAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEEK DGKKTGHMQALRSDISADEFTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFGT LGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADETRIALKTAKEEVKKAQEEQDAL TAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTGSVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELFN KGEYKEAYVIEQKKLALETAQEAYDVAKAIYDTALAQVKSVLETLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101242; Mature: 101111
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKE CCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDNQYKEYDVQMHALDVKLKELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEA HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEKAIIDKAQQRLYVASASLNQY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH YTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCC AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKA CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VADSTTQVNTQLDIAAYKSEPINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTE HHCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECC YNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENGVEWNKLTLAEKEKTAKNAKE CCCCEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHH KFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA HHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAK HHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ADANATLAEWLKLDQTVAELAAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH VAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEEKDGKKTGHMQALRSDISADE HHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHH FTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG HHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHH TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADET HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCCCC RIALKTAKEEVKKAQEEQDALTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC SVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELFNKGEYKEAYVIEQKKLALET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHH AQEAYDVAKAIYDTALAQVKSVLETLSK HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGTTATFTGCIDTDEPEGIVDLRGAKSELIKAQAAVKLVEVEWQKAQVAYQELVNKSKE CCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDNQYKEYDVQMHALDVKLKELEVERAQAATEQAKAEAEAKIAEANRNKAYWENKMAEEA HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIFKAAMLNYQTQTAQAQEAYDNAMKLIEAGKLLLSDGEKAIIDKAQQRLYVASASLNQY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH YTALKTAQDNYYDALVNPNLPTLASLQAELKLAQIAVEKAEILLDEKNNMLALAEDFDAA HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCC AWDDKILDLKKKKSEYESEKSKADVEIATIKTSADYKAAEQKVAEKIKARKAAKEAYDKA CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VADSTTQVNTQLDIAAYKSEPINEGLKTLFSSSNDFTSLDGYTVSTGVFDYPAVQYTQTE HHCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECC YNADLKIEDVTARTSQASLTLMKVNAWIDALGKYSVDENGVEWNKLTLAEKEKTAKNAKE CCCCEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHH KFEKDKANWEISAKAVKGTATTVPTTDLKKATDTYNSSYAAVESAVKAYNSAWDAVYQAA HHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YDDAVEKEKASVLEKTYRDNMITALSPTSKAAWDALTPAEQTTSKLEAILDDTVKQAKAK HHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ADANATLAEWLKLDQTVAELAAKGEAAGNQALADDKDKKVEKAKAALVKAAGEAATAVAK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH VAPAISTYSALAANPYGQILANTVSVEDMTGKDAFYKEEEKDGKKTGHMQALRSDISADE HHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHH FTKLSATKLDRNTAEDALEYTSDATFGTVIPGEDRLVEVTEAMVRAYIKQNNSAVLTDFG HHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHH TLGAMMAANDDVQTCKDMIAAADLIKPLKAQMEGVLADLNAEINTNTALMDPFIAKADET HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCCCC RIALKTAKEEVKKAQEEQDALTAEAEANSKKFAELIQDYIGLISVVQDQIDGINGGVVTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC SVVTVESVLNYWKNQVATQEKSVEEAKQKVTAAEKSIELFNKGEYKEAYVIEQKKLALET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHH AQEAYDVAKAIYDTALAQVKSVLETLSK HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA