Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347335

Identifier: 29347335

GI number: 29347335

Start: 2414743

End: 2415138

Strand: Reverse

Name: 29347335

Synonym: BT_1925

Alternate gene names: NA

Gene position: 2415138-2414743 (Counterclockwise)

Preceding gene: 29347336

Following gene: 29347332

Centisome position: 38.58

GC content: 40.4

Gene sequence:

>396_bases
ATGAAAGATGTTTCGACGGATGCCCCTGTTGACAGCGCAAGGATAATAAATGGAAAGTTTGCTTTTGCAGACACGACAAA
AATAGAAAATCCGGTCATAAAGATACTTTCGATCCATGCCAGTAAAATGGGACTGGAATACCGTTTGCCTGTTGTGATTG
AAAACGGTACCATAAAAGCGAGTATTGCCGATGTCGTTTGTACGGAAGGAACGATGCTGAACGAACGGATGCAGGATTTT
CTTCTGGCTATAGATGCATATTCTGCTGCTTGTACGGATAAGCCGGTGGAACAGATAAAATCCGGTTTTTCGGAATTACT
AAAGAGATATATCGAGATGAATAATGACAATGTAATTGGTACTTATATTCAGACGGCTTACCAGTCATCACTATAA

Upstream 100 bases:

>100_bases
TTCATTGGGGTATTAGTATTGGGGAGCTTGCTCTCAAATAAAAGGTTACAGAATTGACGGTAGTGCGCCTCTGCCGGAAT
TTGAGGGTAAAATGGTTTAC

Downstream 100 bases:

>100_bases
TACGATAAATATTCTTTTTCATTTCTATAATAAATAAGATATACGAATACAGAGATAATTAAATAAACAAGAGCTCAATC
ATAATAATCCTTCTCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKDVSTDAPVDSARIINGKFAFADTTKIENPVIKILSIHASKMGLEYRLPVVIENGTIKASIADVVCTEGTMLNERMQDF
LLAIDAYSAACTDKPVEQIKSGFSELLKRYIEMNNDNVIGTYIQTAYQSSL

Sequences:

>Translated_131_residues
MKDVSTDAPVDSARIINGKFAFADTTKIENPVIKILSIHASKMGLEYRLPVVIENGTIKASIADVVCTEGTMLNERMQDF
LLAIDAYSAACTDKPVEQIKSGFSELLKRYIEMNNDNVIGTYIQTAYQSSL
>Mature_131_residues
MKDVSTDAPVDSARIINGKFAFADTTKIENPVIKILSIHASKMGLEYRLPVVIENGTIKASIADVVCTEGTMLNERMQDF
LLAIDAYSAACTDKPVEQIKSGFSELLKRYIEMNNDNVIGTYIQTAYQSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14440; Mature: 14440

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVSTDAPVDSARIINGKFAFADTTKIENPVIKILSIHASKMGLEYRLPVVIENGTIKA
CCCCCCCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCEEEECCEEEE
SIADVVCTEGTMLNERMQDFLLAIDAYSAACTDKPVEQIKSGFSELLKRYIEMNNDNVIG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEH
TYIQTAYQSSL
HHHHHHHHCCC
>Mature Secondary Structure
MKDVSTDAPVDSARIINGKFAFADTTKIENPVIKILSIHASKMGLEYRLPVVIENGTIKA
CCCCCCCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCEEEECCEEEE
SIADVVCTEGTMLNERMQDFLLAIDAYSAACTDKPVEQIKSGFSELLKRYIEMNNDNVIG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEH
TYIQTAYQSSL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA