| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347189
Identifier: 29347189
GI number: 29347189
Start: 2220294
End: 2222012
Strand: Reverse
Name: 29347189
Synonym: BT_1779
Alternate gene names: NA
Gene position: 2222012-2220294 (Counterclockwise)
Preceding gene: 29347190
Following gene: 29347188
Centisome position: 35.49
GC content: 48.57
Gene sequence:
>1719_bases ATGAAACGACTTCTTTTCATATTATGGATATTCTTGTTGTCCGTAAGCTTTGGGCTGACAAAGATGAAAGCCGATGTACG GATGCCGCTGATCTTCGGTGATCACATGGTGTTGCAGCAAGACACAAAGATTGCCATCTTTGGATGGGCTGATGCCGGAG AAACTGTAGAGGTAGTCTTTGCCGGACAGAAAGTGAAAACTACTGCTGACACTGACGGAACATGGAGAGTGAACCTGAAA CCGATAAAAACGAAGAAAGAAGGGCAGACTCTGACGATTGCCGGTAAGAACAAACTTGTCTACTCGGATGTGTTGGTAGG CGATGTATGGGTTGCTTCCGGACAATCGAATATGGAATGGGGAATAAAGGTAAGAAAAGAATATGCTGACGATATATCCG CTTCGGAAGATCCTTTGCTGCGTTTGTTCTTTGTTCCCAAGAACACGTCGTTAGAGCCATTGACCGATATTGAAGTTCCT CAGGGAACATCTAACCCCGAACGGGCTGCCAGATGGGTGCTTTGTACACCGGAGATGTTGGCTAAGATCAATGGACAGGG CTTTTCGGCGACAGCTTATTACTTTGCACGTGATATGCGTGCTGCAAACGGACGCCCGTTGGGAGTTATCCAGTCTGCAT GGGGAGGTACGCGTGCAGAAGCCTGGACCAGTCTTTCCGGATTGAAACAAGAACCGGCTTTGGCTCACTATGTAGCTGCG TATGAGAAGAATGTGAAAGATAATCCGGAAATACTCGCCACTTATCCACAGAAGCAGAAAGAATTTGATGAAGCGGTAAG GGAATGGGATAAAACGGTAGGAAAAGAATGGAATCAGGCACAAAAAGAATGGGCGATAGCTGTGCAGGCAGCACAAGCAG CTGGAAAGCCGGCTCCTCCCAAACCACAGCCCAGCGTTCCCCGTCCGCCCAATCCGCGTAAACCGAATGGGGGAAATAAT GGTCCGTCCAATCTGTTTAACGCAATGATTTCTCCTTTAATCCCTTTGAGTATAAAGGGAGTCATCTGGTATCAGGGAGA ATTTAACTCCGGCGGCTCTGGAAAAGAATATGCTACCCTGTTCTCCCGGATGATTACGGATTGGAGAGAGAAATGGGGAA TCGGTGATTTTCCTTTCGTATATGTGCAGCTTCCCAATTTCGAACCGGTAGATCCCGAGCCGTCTGTCGAAGGAAACGGC TGGCGCTGGGTACGGGAAGGACAGTTGAAGGCCTTGAATCTGCCCAACACGGCAATGGCTGTGACAATCGATGTAGGAGA TCCTTTCGATTTGCATCCGGTAGATAAATACGATGTCGGACACCGGCTGGCTCTTGCTGCCCGAAAGCTGGCATACGGAG AGAAAATTGTCGGCATGGGACCTCTTTATAAAAAGATGTCTGTGAAAGGAAATAAGATCATTCTGGAGTTTACTAATCAG GGTAAAAAGTTGGTGATGGGAACTTCTCCGTACATCCCGGCAGGAAAACCGCCTCATCCGAAACCGACGAAGCTGACAGG CTTCGGCATTGCAGGAGCGGACCGTAAGTTTGTATGGGCGGATGCGGTGATTGAAGGAAATAAGGTGATTGTGTCCAGCA GTGAAGTGGCTGTACCTCTTGCCGTACGTTACGGATTTTCCAATAGCCCCCGTTGTAACCTGTATAACGAGAAAGGCTTG CCGGCATCTCCTTTCCGCACGGACAGCTGGGATAAATGA
Upstream 100 bases:
>100_bases GTTCAAGCTGGCAAAAGAGAATAAGCAGCCTGTAGCGTTTACGACCAAATACAAGATGGTGTCTATGTAGTACTAATTTA TTCCCCTAACTTTTAATACA
Downstream 100 bases:
>100_bases TGGGGGAGAGTACGGGGCTTACCATGTTTGTTATTAAATAAGGTAGAAAAATGATCATGATGAAAAGGTATAAAAAGATT TTGTTGACAGGTGTGTTGTC
Product: sialic acid-specific 9-O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialate O-Acetylesterase Homolog; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MKRLLFILWIFLLSVSFGLTKMKADVRMPLIFGDHMVLQQDTKIAIFGWADAGETVEVVFAGQKVKTTADTDGTWRVNLK PIKTKKEGQTLTIAGKNKLVYSDVLVGDVWVASGQSNMEWGIKVRKEYADDISASEDPLLRLFFVPKNTSLEPLTDIEVP QGTSNPERAARWVLCTPEMLAKINGQGFSATAYYFARDMRAANGRPLGVIQSAWGGTRAEAWTSLSGLKQEPALAHYVAA YEKNVKDNPEILATYPQKQKEFDEAVREWDKTVGKEWNQAQKEWAIAVQAAQAAGKPAPPKPQPSVPRPPNPRKPNGGNN GPSNLFNAMISPLIPLSIKGVIWYQGEFNSGGSGKEYATLFSRMITDWREKWGIGDFPFVYVQLPNFEPVDPEPSVEGNG WRWVREGQLKALNLPNTAMAVTIDVGDPFDLHPVDKYDVGHRLALAARKLAYGEKIVGMGPLYKKMSVKGNKIILEFTNQ GKKLVMGTSPYIPAGKPPHPKPTKLTGFGIAGADRKFVWADAVIEGNKVIVSSSEVAVPLAVRYGFSNSPRCNLYNEKGL PASPFRTDSWDK
Sequences:
>Translated_572_residues MKRLLFILWIFLLSVSFGLTKMKADVRMPLIFGDHMVLQQDTKIAIFGWADAGETVEVVFAGQKVKTTADTDGTWRVNLK PIKTKKEGQTLTIAGKNKLVYSDVLVGDVWVASGQSNMEWGIKVRKEYADDISASEDPLLRLFFVPKNTSLEPLTDIEVP QGTSNPERAARWVLCTPEMLAKINGQGFSATAYYFARDMRAANGRPLGVIQSAWGGTRAEAWTSLSGLKQEPALAHYVAA YEKNVKDNPEILATYPQKQKEFDEAVREWDKTVGKEWNQAQKEWAIAVQAAQAAGKPAPPKPQPSVPRPPNPRKPNGGNN GPSNLFNAMISPLIPLSIKGVIWYQGEFNSGGSGKEYATLFSRMITDWREKWGIGDFPFVYVQLPNFEPVDPEPSVEGNG WRWVREGQLKALNLPNTAMAVTIDVGDPFDLHPVDKYDVGHRLALAARKLAYGEKIVGMGPLYKKMSVKGNKIILEFTNQ GKKLVMGTSPYIPAGKPPHPKPTKLTGFGIAGADRKFVWADAVIEGNKVIVSSSEVAVPLAVRYGFSNSPRCNLYNEKGL PASPFRTDSWDK >Mature_572_residues MKRLLFILWIFLLSVSFGLTKMKADVRMPLIFGDHMVLQQDTKIAIFGWADAGETVEVVFAGQKVKTTADTDGTWRVNLK PIKTKKEGQTLTIAGKNKLVYSDVLVGDVWVASGQSNMEWGIKVRKEYADDISASEDPLLRLFFVPKNTSLEPLTDIEVP QGTSNPERAARWVLCTPEMLAKINGQGFSATAYYFARDMRAANGRPLGVIQSAWGGTRAEAWTSLSGLKQEPALAHYVAA YEKNVKDNPEILATYPQKQKEFDEAVREWDKTVGKEWNQAQKEWAIAVQAAQAAGKPAPPKPQPSVPRPPNPRKPNGGNN GPSNLFNAMISPLIPLSIKGVIWYQGEFNSGGSGKEYATLFSRMITDWREKWGIGDFPFVYVQLPNFEPVDPEPSVEGNG WRWVREGQLKALNLPNTAMAVTIDVGDPFDLHPVDKYDVGHRLALAARKLAYGEKIVGMGPLYKKMSVKGNKIILEFTNQ GKKLVMGTSPYIPAGKPPHPKPTKLTGFGIAGADRKFVWADAVIEGNKVIVSSSEVAVPLAVRYGFSNSPRCNLYNEKGL PASPFRTDSWDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=284, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63209; Mature: 63209
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLFILWIFLLSVSFGLTKMKADVRMPLIFGDHMVLQQDTKIAIFGWADAGETVEVVF CHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCEEEEECCCEEEEEEECCCCCEEEEEE AGQKVKTTADTDGTWRVNLKPIKTKKEGQTLTIAGKNKLVYSDVLVGDVWVASGQSNMEW ECCEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCEE GIKVRKEYADDISASEDPLLRLFFVPKNTSLEPLTDIEVPQGTSNPERAARWVLCTPEML CEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCEEEEECHHHH AKINGQGFSATAYYFARDMRAANGRPLGVIQSAWGGTRAEAWTSLSGLKQEPALAHYVAA HHHCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHH YEKNVKDNPEILATYPQKQKEFDEAVREWDKTVGKEWNQAQKEWAIAVQAAQAAGKPAPP HHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCC KPQPSVPRPPNPRKPNGGNNGPSNLFNAMISPLIPLSIKGVIWYQGEFNSGGSGKEYATL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHH FSRMITDWREKWGIGDFPFVYVQLPNFEPVDPEPSVEGNGWRWVREGQLKALNLPNTAMA HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCEEE VTIDVGDPFDLHPVDKYDVGHRLALAARKLAYGEKIVGMGPLYKKMSVKGNKIILEFTNQ EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCEEEEEEECC GKKLVMGTSPYIPAGKPPHPKPTKLTGFGIAGADRKFVWADAVIEGNKVIVSSSEVAVPL CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCEEEEECCCEEEEE AVRYGFSNSPRCNLYNEKGLPASPFRTDSWDK EEEECCCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRLLFILWIFLLSVSFGLTKMKADVRMPLIFGDHMVLQQDTKIAIFGWADAGETVEVVF CHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCEEEEECCCEEEEEEECCCCCEEEEEE AGQKVKTTADTDGTWRVNLKPIKTKKEGQTLTIAGKNKLVYSDVLVGDVWVASGQSNMEW ECCEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCEE GIKVRKEYADDISASEDPLLRLFFVPKNTSLEPLTDIEVPQGTSNPERAARWVLCTPEML CEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCEEEEECHHHH AKINGQGFSATAYYFARDMRAANGRPLGVIQSAWGGTRAEAWTSLSGLKQEPALAHYVAA HHHCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHH YEKNVKDNPEILATYPQKQKEFDEAVREWDKTVGKEWNQAQKEWAIAVQAAQAAGKPAPP HHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCC KPQPSVPRPPNPRKPNGGNNGPSNLFNAMISPLIPLSIKGVIWYQGEFNSGGSGKEYATL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHH FSRMITDWREKWGIGDFPFVYVQLPNFEPVDPEPSVEGNGWRWVREGQLKALNLPNTAMA HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCEEE VTIDVGDPFDLHPVDKYDVGHRLALAARKLAYGEKIVGMGPLYKKMSVKGNKIILEFTNQ EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCEEEEEEECC GKKLVMGTSPYIPAGKPPHPKPTKLTGFGIAGADRKFVWADAVIEGNKVIVSSSEVAVPL CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCEEEEECCCEEEEE AVRYGFSNSPRCNLYNEKGLPASPFRTDSWDK EEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA