| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is bglX [H]
Identifier: 29347190
GI number: 29347190
Start: 2222043
End: 2224895
Strand: Reverse
Name: bglX [H]
Synonym: BT_1780
Alternate gene names: 29347190
Gene position: 2224895-2222043 (Counterclockwise)
Preceding gene: 29347191
Following gene: 29347189
Centisome position: 35.54
GC content: 46.55
Gene sequence:
>2853_bases ATGAAATGGATATTGGCAGTAGGGTTATTGTCATGTTCGGTAGCAATGGCACAGCAACAGAGTGATATATTATCGGTATC TGCTTCTGCAAATGCGGAAAATGCTGCTTTAGCCTTTGACAGGAATGTAAAAACGATGTGGACAATCCCTTCTCAGGCAC TAAAGGCTGAACAATGGCTGATGTTTACCATTCAGCAGCCCGGAGATGTTTGTGAACTGGACCTTCAGATGCAGGGTATC AATAAGAATGAACTGAAAGAAGTACTGGATATCTTTGTCACTTATGACCCCATGAATCTGGGAACTCCCGTGAACTACCG GATCGAAGGGAGCGACAAACAGATGAAAGTCAAATTCACTCCTAAATACGGTGCACACGTCAAGCTGAATTTTAAGTCGG GAAAGTTGGATAAACCTTTCTCTCTGAAAGAAATTTCGGTTCTTGTGGCAGAAAAGGTATTGACGGACAGTCAGGGAAAA GTAACTGACCGTCGGTATATGGATGCGTCACTGCCAGTAGAAGAACGGGTGGAAAGTTTGTTGGCAGTGATGACGCCGGA GGATAAAATGGAACTGATCCGTGAAGGATGGGGCATTCCCGGTATTCCTCATTTGTACGTGCCTCCTATCACAAAGGTAG AAGCGGTGCATGGTTTCTCTTATGGTAGCGGTGCTACTATCTTCCCTCAGGCTTTGGCGATGGGAGCTACCTGGAACAGG AAGCTGACGGAAGAAGTGGCTATGGTGATCGGAGACGAGACAGTGGCTGCCAATACAAAACAGGCATGGTCGCCGGTGTT GGACGTTGCACAGGATGCACGTTGGGGGCGCTGTGAAGAAACCTTTGGAGAAGACCCTGTATTGGTGTCACAAATAGGAG GTGCATGGATCAAAGGATACCAGTCCAGAGGATTGTTTACTACTCCCAAGCATTTCGGTGGACATGGTGCCCCGTTGGGT GGACGTGACTCACATGATATAGGACTGTCCGAACGTGAAATGCGCGAGATTCATCTGGTTCCGTTCCGTCATGCGATCCG TAATTATGACTGCCAGTCTTTGATGATGGCCTATTCCGATTATATGGGAGTTCCGGTTGCCAAGAGCAAAGAACTGCTGC AACAGATATTGCGTCAGGAATGGGGATTCAATGGATTCATCGTCAGTGACTGTGGCGCTATCGGAAATCTGACAGCCCGT AAACATTACACGGCAAAAGATAAGATTGAAGCAGCCAATCAGGCATTGGCTGCCGGCATTGCGACCAATTGCGGTGATAC TTACAATAATAAAGAAGTGATTCAGGCGGCAAAAGACGGTCGTATCAATATGGAAGATCTGGACAATGTATGCCGTACGA TGCTGGGTACGATGTTCCGCAACGAACTCTTTGAAAAGAATCCTTGCAAACCACTGGACTGGAAGAAAATATACCCGGGA TGGAACTCGGACAGCCATAAGGAAATGGCACGTCAGGCGGCACGTGAATCAATTGTAATGCTGGAAAACAAAGACAATCT TCTTCCTTTGTCAAAGACACTGCGTACGATTGCGGTACTGGGTCCCGGTGCAGATGACCTGCAGCCGGGCGATTACACTC CGAAATTGCTTCCGGGACAACTGAAATCGGTATTGACAGGTATCAAAGGCGCAGTGGGCAAGCAGACCAAAGTTCTTTAT GAACAAGGATGTGACTTTACCAATCCGGACGAAACCAATATTCCGAAAGCTGTGAAGGCAGCTTCCCAATCAGATGTCGT GATTATGGTACTGGGTGACTGCTCTACCAGTGAAGCGACCAATGATGTCCGTAAGACATGTGGAGAAAATAACGACTGGG CGACTTTAATCCTTCCGGGCAAACAGCAGGAGTTGCTGGAAGCAGTCTGTGCAACCGGAAAACCGGTGATACTGATTCTT CAGGCAGGCCGTCCTTATGATATTCTGAAAGCATCCGAAATGTGCAAGGCTATCTTGGTAAACTGGTTGCCGGGACAAGA AGGTGGTCCGGCTATGGCAGATGTACTGTTTGGTGATTACAATCCTGCCGGTCGCCTGCCGATGACATTCCCGCGTCACG TAGGACAACTTCCTTTGTATTATAACTTCAAGACTTCAGGACGCCGTTACGAATATGTAGACATGGAATATTATCCTCTC TACCGCTTCGGATTCGGACTCAGCTACACTTCGTTCGAATATTCTAATCTGAAAATACAGGAAAAGGCGAATGGCAATGT GGAAGTTCAGGCTACAGTGAAGAACGTAGGAAGCCGTGCGGGTGATGAAGTCGCTCAGCTATATGTGACGGATATGTATG CCAGTGTGAAAACCCGTGTTATGGAATTGAAAGACTTTGCCCGTATTCATTTGCAGCCGGGAGAATCGAAGACTGTTTCG TTTGAAATGACTCCATATGATATTTCATTGCTCAATGACCGGATGGACAGAGTCGTGGAAAAAGGAGAGTTCAAAATCAT GGTAGGCGGAATGAGTCCCGATTACGTAGCTAAAAATGAGATCAAACATAGTGTAGGCTATAGTGATAACAAGAAAGGCG TCACGGGAATGCTTAATTATACACATGAGTTTGGTGCCAATTTCGATCTTGCTGTGTCCAAGGTAGAAGAGAACCTTGTC AAGAATCAGAAGACAGTGTGGGTGAGTGTGAAAAATACAGGTACGTTGATGGATATCGGTAAGGTGGAAATGTTTGTGGA TGGTAAGAAAGTGGGAGATGCCGTTCATTATGAACTGGGAGCAGGTGAAGAAAAACTGATTCCGTTCAAGCTGGCAAAAG AGAATAAGCAGCCTGTAGCGTTTACGACCAAATACAAGATGGTGTCTATGTAG
Upstream 100 bases:
>100_bases AATGGTGAAGCAAACTAAATAACAGATAGATCCATACACAGGCAATTGATAAATAGAATCCTTATAATAGTTGAAAAACG AACATAGCATGAAAAACAAA
Downstream 100 bases:
>100_bases TACTAATTTATTCCCCTAACTTTTAATACAATGAAACGACTTCTTTTCATATTATGGATATTCTTGTTGTCCGTAAGCTT TGGGCTGACAAAGATGAAAG
Product: periplasmic beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 950; Mature: 950
Protein sequence:
>950_residues MKWILAVGLLSCSVAMAQQQSDILSVSASANAENAALAFDRNVKTMWTIPSQALKAEQWLMFTIQQPGDVCELDLQMQGI NKNELKEVLDIFVTYDPMNLGTPVNYRIEGSDKQMKVKFTPKYGAHVKLNFKSGKLDKPFSLKEISVLVAEKVLTDSQGK VTDRRYMDASLPVEERVESLLAVMTPEDKMELIREGWGIPGIPHLYVPPITKVEAVHGFSYGSGATIFPQALAMGATWNR KLTEEVAMVIGDETVAANTKQAWSPVLDVAQDARWGRCEETFGEDPVLVSQIGGAWIKGYQSRGLFTTPKHFGGHGAPLG GRDSHDIGLSEREMREIHLVPFRHAIRNYDCQSLMMAYSDYMGVPVAKSKELLQQILRQEWGFNGFIVSDCGAIGNLTAR KHYTAKDKIEAANQALAAGIATNCGDTYNNKEVIQAAKDGRINMEDLDNVCRTMLGTMFRNELFEKNPCKPLDWKKIYPG WNSDSHKEMARQAARESIVMLENKDNLLPLSKTLRTIAVLGPGADDLQPGDYTPKLLPGQLKSVLTGIKGAVGKQTKVLY EQGCDFTNPDETNIPKAVKAASQSDVVIMVLGDCSTSEATNDVRKTCGENNDWATLILPGKQQELLEAVCATGKPVILIL QAGRPYDILKASEMCKAILVNWLPGQEGGPAMADVLFGDYNPAGRLPMTFPRHVGQLPLYYNFKTSGRRYEYVDMEYYPL YRFGFGLSYTSFEYSNLKIQEKANGNVEVQATVKNVGSRAGDEVAQLYVTDMYASVKTRVMELKDFARIHLQPGESKTVS FEMTPYDISLLNDRMDRVVEKGEFKIMVGGMSPDYVAKNEIKHSVGYSDNKKGVTGMLNYTHEFGANFDLAVSKVEENLV KNQKTVWVSVKNTGTLMDIGKVEMFVDGKKVGDAVHYELGAGEEKLIPFKLAKENKQPVAFTTKYKMVSM
Sequences:
>Translated_950_residues MKWILAVGLLSCSVAMAQQQSDILSVSASANAENAALAFDRNVKTMWTIPSQALKAEQWLMFTIQQPGDVCELDLQMQGI NKNELKEVLDIFVTYDPMNLGTPVNYRIEGSDKQMKVKFTPKYGAHVKLNFKSGKLDKPFSLKEISVLVAEKVLTDSQGK VTDRRYMDASLPVEERVESLLAVMTPEDKMELIREGWGIPGIPHLYVPPITKVEAVHGFSYGSGATIFPQALAMGATWNR KLTEEVAMVIGDETVAANTKQAWSPVLDVAQDARWGRCEETFGEDPVLVSQIGGAWIKGYQSRGLFTTPKHFGGHGAPLG GRDSHDIGLSEREMREIHLVPFRHAIRNYDCQSLMMAYSDYMGVPVAKSKELLQQILRQEWGFNGFIVSDCGAIGNLTAR KHYTAKDKIEAANQALAAGIATNCGDTYNNKEVIQAAKDGRINMEDLDNVCRTMLGTMFRNELFEKNPCKPLDWKKIYPG WNSDSHKEMARQAARESIVMLENKDNLLPLSKTLRTIAVLGPGADDLQPGDYTPKLLPGQLKSVLTGIKGAVGKQTKVLY EQGCDFTNPDETNIPKAVKAASQSDVVIMVLGDCSTSEATNDVRKTCGENNDWATLILPGKQQELLEAVCATGKPVILIL QAGRPYDILKASEMCKAILVNWLPGQEGGPAMADVLFGDYNPAGRLPMTFPRHVGQLPLYYNFKTSGRRYEYVDMEYYPL YRFGFGLSYTSFEYSNLKIQEKANGNVEVQATVKNVGSRAGDEVAQLYVTDMYASVKTRVMELKDFARIHLQPGESKTVS FEMTPYDISLLNDRMDRVVEKGEFKIMVGGMSPDYVAKNEIKHSVGYSDNKKGVTGMLNYTHEFGANFDLAVSKVEENLV KNQKTVWVSVKNTGTLMDIGKVEMFVDGKKVGDAVHYELGAGEEKLIPFKLAKENKQPVAFTTKYKMVSM >Mature_950_residues MKWILAVGLLSCSVAMAQQQSDILSVSASANAENAALAFDRNVKTMWTIPSQALKAEQWLMFTIQQPGDVCELDLQMQGI NKNELKEVLDIFVTYDPMNLGTPVNYRIEGSDKQMKVKFTPKYGAHVKLNFKSGKLDKPFSLKEISVLVAEKVLTDSQGK VTDRRYMDASLPVEERVESLLAVMTPEDKMELIREGWGIPGIPHLYVPPITKVEAVHGFSYGSGATIFPQALAMGATWNR KLTEEVAMVIGDETVAANTKQAWSPVLDVAQDARWGRCEETFGEDPVLVSQIGGAWIKGYQSRGLFTTPKHFGGHGAPLG GRDSHDIGLSEREMREIHLVPFRHAIRNYDCQSLMMAYSDYMGVPVAKSKELLQQILRQEWGFNGFIVSDCGAIGNLTAR KHYTAKDKIEAANQALAAGIATNCGDTYNNKEVIQAAKDGRINMEDLDNVCRTMLGTMFRNELFEKNPCKPLDWKKIYPG WNSDSHKEMARQAARESIVMLENKDNLLPLSKTLRTIAVLGPGADDLQPGDYTPKLLPGQLKSVLTGIKGAVGKQTKVLY EQGCDFTNPDETNIPKAVKAASQSDVVIMVLGDCSTSEATNDVRKTCGENNDWATLILPGKQQELLEAVCATGKPVILIL QAGRPYDILKASEMCKAILVNWLPGQEGGPAMADVLFGDYNPAGRLPMTFPRHVGQLPLYYNFKTSGRRYEYVDMEYYPL YRFGFGLSYTSFEYSNLKIQEKANGNVEVQATVKNVGSRAGDEVAQLYVTDMYASVKTRVMELKDFARIHLQPGESKTVS FEMTPYDISLLNDRMDRVVEKGEFKIMVGGMSPDYVAKNEIKHSVGYSDNKKGVTGMLNYTHEFGANFDLAVSKVEENLV KNQKTVWVSVKNTGTLMDIGKVEMFVDGKKVGDAVHYELGAGEEKLIPFKLAKENKQPVAFTTKYKMVSM
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=676, Percent_Identity=35.9467455621302, Blast_Score=388, Evalue=1e-109, Organism=Escherichia coli, GI1787350, Length=158, Percent_Identity=34.1772151898734, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 105407; Mature: 105407
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWILAVGLLSCSVAMAQQQSDILSVSASANAENAALAFDRNVKTMWTIPSQALKAEQWL CCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEEECCHHHHCCCCEE MFTIQQPGDVCELDLQMQGINKNELKEVLDIFVTYDPMNLGTPVNYRIEGSDKQMKVKFT EEEECCCCCEEEEEEEEECCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCEEEEEEC PKYGAHVKLNFKSGKLDKPFSLKEISVLVAEKVLTDSQGKVTDRRYMDASLPVEERVESL CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHH LAVMTPEDKMELIREGWGIPGIPHLYVPPITKVEAVHGFSYGSGATIFPQALAMGATWNR HHHCCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHEECCCCCCCCCHHHHHHHCCCCCCH KLTEEVAMVIGDETVAANTKQAWSPVLDVAQDARWGRCEETFGEDPVLVSQIGGAWIKGY HHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCEEHHHHCCHHHHHH QSRGLFTTPKHFGGHGAPLGGRDSHDIGLSEREMREIHLVPFRHAIRNYDCQSLMMAYSD CCCCCEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHEEECHHHHHHCCCCHHHHHHHHHH YMGVPVAKSKELLQQILRQEWGFNGFIVSDCGAIGNLTARKHYTAKDKIEAANQALAAGI HCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ATNCGDTYNNKEVIQAAKDGRINMEDLDNVCRTMLGTMFRNELFEKNPCKPLDWKKIYPG HCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC WNSDSHKEMARQAARESIVMLENKDNLLPLSKTLRTIAVLGPGADDLQPGDYTPKLLPGQ CCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCHH LKSVLTGIKGAVGKQTKVLYEQGCDFTNPDETNIPKAVKAASQSDVVIMVLGDCSTSEAT HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHH NDVRKTCGENNDWATLILPGKQQELLEAVCATGKPVILILQAGRPYDILKASEMCKAILV HHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH NWLPGQEGGPAMADVLFGDYNPAGRLPMTFPRHVGQLPLYYNFKTSGRRYEYVDMEYYPL HCCCCCCCCCHHHHHEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEECCEECCH YRFGFGLSYTSFEYSNLKIQEKANGNVEVQATVKNVGSRAGDEVAQLYVTDMYASVKTRV HHHCCCCCCCEEEECCEEEEECCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH MELKDFARIHLQPGESKTVSFEMTPYDISLLNDRMDRVVEKGEFKIMVGGMSPDYVAKNE HHHHHHHEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH IKHSVGYSDNKKGVTGMLNYTHEFGANFDLAVSKVEENLVKNQKTVWVSVKNTGTLMDIG HHHHCCCCCCCCCCEEEEECHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEC KVEMFVDGKKVGDAVHYELGAGEEKLIPFKLAKENKQPVAFTTKYKMVSM CEEEEECCHHHCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKWILAVGLLSCSVAMAQQQSDILSVSASANAENAALAFDRNVKTMWTIPSQALKAEQWL CCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEEECCHHHHCCCCEE MFTIQQPGDVCELDLQMQGINKNELKEVLDIFVTYDPMNLGTPVNYRIEGSDKQMKVKFT EEEECCCCCEEEEEEEEECCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCEEEEEEC PKYGAHVKLNFKSGKLDKPFSLKEISVLVAEKVLTDSQGKVTDRRYMDASLPVEERVESL CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHH LAVMTPEDKMELIREGWGIPGIPHLYVPPITKVEAVHGFSYGSGATIFPQALAMGATWNR HHHCCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHEECCCCCCCCCHHHHHHHCCCCCCH KLTEEVAMVIGDETVAANTKQAWSPVLDVAQDARWGRCEETFGEDPVLVSQIGGAWIKGY HHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCEEHHHHCCHHHHHH QSRGLFTTPKHFGGHGAPLGGRDSHDIGLSEREMREIHLVPFRHAIRNYDCQSLMMAYSD CCCCCEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHEEECHHHHHHCCCCHHHHHHHHHH YMGVPVAKSKELLQQILRQEWGFNGFIVSDCGAIGNLTARKHYTAKDKIEAANQALAAGI HCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ATNCGDTYNNKEVIQAAKDGRINMEDLDNVCRTMLGTMFRNELFEKNPCKPLDWKKIYPG HCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC WNSDSHKEMARQAARESIVMLENKDNLLPLSKTLRTIAVLGPGADDLQPGDYTPKLLPGQ CCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCHH LKSVLTGIKGAVGKQTKVLYEQGCDFTNPDETNIPKAVKAASQSDVVIMVLGDCSTSEAT HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHH NDVRKTCGENNDWATLILPGKQQELLEAVCATGKPVILILQAGRPYDILKASEMCKAILV HHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH NWLPGQEGGPAMADVLFGDYNPAGRLPMTFPRHVGQLPLYYNFKTSGRRYEYVDMEYYPL HCCCCCCCCCHHHHHEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEECCEECCH YRFGFGLSYTSFEYSNLKIQEKANGNVEVQATVKNVGSRAGDEVAQLYVTDMYASVKTRV HHHCCCCCCCEEEECCEEEEECCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH MELKDFARIHLQPGESKTVSFEMTPYDISLLNDRMDRVVEKGEFKIMVGGMSPDYVAKNE HHHHHHHEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH IKHSVGYSDNKKGVTGMLNYTHEFGANFDLAVSKVEENLVKNQKTVWVSVKNTGTLMDIG HHHHCCCCCCCCCCEEEEECHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEC KVEMFVDGKKVGDAVHYELGAGEEKLIPFKLAKENKQPVAFTTKYKMVSM CEEEEECCHHHCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]