Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347170

Identifier: 29347170

GI number: 29347170

Start: 2174963

End: 2176534

Strand: Reverse

Name: 29347170

Synonym: BT_1760

Alternate gene names: NA

Gene position: 2176534-2174963 (Counterclockwise)

Preceding gene: 29347171

Following gene: 29347169

Centisome position: 34.77

GC content: 46.88

Gene sequence:

>1572_bases
ATGATGAAAAATATGATCTTACCTATAGCATTTACCGCACTGATAGCTTCGATGACTGCTTGCAGTGACGAGACTGACCC
CATCTTGACTCAGAAAAACTGGGACGGTACAGCCACATACTTCCAATCGAGTGATGAGCATGGCTTCTCGATGTACTATA
AGCCACAGGTCGGCTTTGTAGGTGACCCGATGCCATTCTATGATCCGGTTGCCAAGGACTTTAAAGTGATGTACCTGCAA
GATTACCGTCCGAACCCCGAAGCTACGTACCATCCCATTTTCGGGGTGGCTACCAAAGACGGTGCTACTTACGAATCTCT
CGGCGAACTGATTTCCTGCGGAGGGCGTGACGAACAGGATGCTGCCATCGGCACAGGAGGAACGATCTATAACCCTGCCG
ACAAACTGTATTATACCTTCTACACCGGTAATAAGTTCAAGCCTTCTTCCGACCAGAATGCTCAGGTAGTGATGGTAGCT
ACTTCTCCCGATTTCAAGACATGGACCAAGAACCGTACCTTCTACCTGAAAGGAGATACGTATGGTTATGACAAGAATGA
CTTCCGTGACCCGTTCCTGTTCCAGACCGAAGACGGTGTGTATCACATGCTGATCGCTACCCGCAAGAACGGAAAAGGGC
ATATCGCCGAATTTACCTCTGCCGACCTGAAAGAGTGGGAATCTGCCGGAACCTTTATGACCATGATGTGGGATCGTTTC
TACGAATGTCCGGATGTATTCAAGATGGGGGACTGGTGGTATCTGATTTATTCGGAACAGGCTTCCTTCATGCGTAAAGT
ACAATATTTCAAAGGCAGAACGCTGGAAGATTTGAAAGCAACTACCGCCAATGATGCCGGAATATGGCCGGACAATCGTG
AAGGAATGCTGGACAGCCGCGCATTCTATGCCGGAAAGACCGCTTCCGACGGAACAAACCGCTACATTTGGGGTTGGTGT
CCCACACGTGCCGGAAATGATAATGGAAATGTTGGTGATGTAGAACCCGAATGGGCAGGCAATCTGGTAGCACAACGTCT
GATTCAACACGAAGACGGTACTTTAACCCTCGGAGTACCCGATGCAATCGACCGTAAATACACTTCCGCACAAGAAGTGA
AAGTAATGGCAAAAGATGGTAACATGATCGAAAGCGGTAAAACCTATACTTTGGGCGAAGGTGCCTCCGTCATCTTCAAC
CGTCTGAAAGTACATAACAAGATTTCTTTCACCGTAAAGACCGCTTCGAATACGGACCGTTTCGGAATCTCTTTTGTACG
TGGAACGGATTCCGCTTCCTGGTATAGTATCCATGTCAATGCCGATGAAGGCAAAGCGAATTTTGAGAAAGACGGTGACG
ATGCCAAATACTTATTCGATAATAAATTCAATATTCCGGCAGATAATGAATATCGTGTGACGATTTACAGTGACCAGTCC
GTCTGCGTGACTTATATCAACGACCAGTTATCTTTCACCAACCGTATCTACCAAATGCAGAAGAACCCGTGGTCACTCTG
CTGTTATAAAGGTGAAATAACTGTATCAGACGTTCAGGTAAGCACTTATTGA

Upstream 100 bases:

>100_bases
CAAGGGAGTAGACGCTTCTGCCGACTACTATCACTACAACGTAGAGCAAATGACTCTCAATGCAATCAACTACTTGTGTA
AATAAAAAGAATAAGCAACA

Downstream 100 bases:

>100_bases
TGAAAACTACACCGGCAAGTAACATCTTTTACAGCGTTTGAAACAAAAGTGATAGGCGCTAACCTTGGAAGCGCCTATCT
TTGCACTGTAACAACTATCA

Product: glycosylhydrolase

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase; Glycosyl Hydrolase; Family; Beta-Fructofuranosidase Protein; Glycoside Hydrolase Family Protein

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQ
DYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVA
TSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF
YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWC
PTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFN
RLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS
VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY

Sequences:

>Translated_523_residues
MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQ
DYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVA
TSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF
YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWC
PTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFN
RLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS
VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
>Mature_523_residues
MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQ
DYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVA
TSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF
YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWC
PTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFN
RLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS
VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY

Specific function: Unknown

COG id: COG1621

COG function: function code G; Beta-fructosidases (levanase/invertase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59241; Mature: 59241

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFV
CCCCEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCCCCCEEEEECCCCCCC
GDPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQD
CCCCCCCCCCCCCEEEEEEEECCCCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCC
AAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDT
CEEECCCCEECCCCCEEEEEEECCEECCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCC
YGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF
CCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHH
YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSR
CCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
AFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVP
EEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
DAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDR
HHHHHCCCCCHHEEEEECCCCEEECCCEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCC
FGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS
CEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCC
VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
EEEEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECC
>Mature Secondary Structure
MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFV
CCCCEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCCCCCEEEEECCCCCCC
GDPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQD
CCCCCCCCCCCCCEEEEEEEECCCCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCC
AAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDT
CEEECCCCEECCCCCEEEEEEECCEECCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCC
YGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF
CCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHH
YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSR
CCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
AFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVP
EEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
DAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDR
HHHHHCCCCCHHEEEEECCCCEEECCCEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCC
FGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS
CEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCC
VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
EEEEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA