| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347171
Identifier: 29347171
GI number: 29347171
Start: 2176550
End: 2177935
Strand: Reverse
Name: 29347171
Synonym: BT_1761
Alternate gene names: NA
Gene position: 2177935-2176550 (Counterclockwise)
Preceding gene: 29347172
Following gene: 29347170
Centisome position: 34.79
GC content: 48.05
Gene sequence:
>1386_bases ATGAAATCAATCATAAAACAACTTTATACTATCCTGTTGGTGACTGTGGCATGCCTTACAGTCACAGGATGTAGTGATGA CTTCAAATCCGGCCTTCGTCTGGACGGAGATGTTTGGGTGAACTCTATCCGGCTGGATGAATACGCAGGAACTGTCGACT ATCAGAATAAGGCAATCGTAGTAGGAGTGCCCTACGATTACGATATTACCCGCATGGTGGTCACAGAAATGAATCTTTCC GAAGGAGCCAAGGCTAGCATCGCTATCGGTGAGACAATCGACTTTTCTCTTCCCGTATCTTTGACGGTGAAGAATGGCGA TGTACAAATGAGCTACACGATTACCGTGAAGAGAGATGAGGCGAAGATACTGACCTTCAAATTGAATGATACTTATGTAG GAAAGGTAGACCAGTTATCGAAAACCATTTCTGTAGTCGTTCCGCTGACAGTGGATATCACTCAGTTGAAAGGTACGTTT ACCGTAACGGACGGAGCTACCGTGACTCCGGCATCCGGAAGTATTCAGGACTTTACGAACCCCGTCACTTACACGGCAAC TTACCGTTCGGCAGTAACTCCTTATGTGGTAACGGTTACTCAGGGAAATGTGATTCCGACTGCCTTTGTCGGTACGGCTT CTTCCGTCAGTCTTCTGACGAGTCCCGAAGAGAAAGCCGCTGCCCAATGGATGATGGATAATGTATCGATGTCCGAATAT ATCTCATTCAAGGATGTAGTGGACGGAAAAGTGGATTTAGGTAAATATACCGCTATCTGGTGGCATTTCCACGCAGACAA TGGTGACAATCCTCCTTTGCCGGATGACGCGAAAGCGGCAGCGGAGAAGTTTAAAGTCTACTATCAGAATGGTGGTAATC TGCTGCTGACCCGTTACGCTACTTTCTATATCGCCAATCTCGGCATCGCTAAAGACGAGCGTGTACCGAACAATAGCTGG GGAGGAAACGAAGACTCGCCCGAAATCACCTCTGCCCCATGGAGCTTCCTGATTACCGGCAGTGAATCACATCCGTTATT CCAGGATTTAAGATGGAAAGATGGCGACAAGTCGACAGTCTATACCTGTGATGCCGGCTATGCGATTACCAATAGCACAG CGCAGTGGCATATCGGGACAGACTGGGGAGGTTATGACGACCTGAACGCATGGCGTAACCTGACAGGAGGAATCGATTTG GCACATGGAGGCGACGGGGCGGTAGTCATTGCCGAATTTGAACCGCGTTCCAATAGCGGACGTACGCTCTGTATCGGTTC CGGCTGCTATGATTGGTACGGCAAGGGAGTAGACGCTTCTGCCGACTACTATCACTACAACGTAGAGCAAATGACTCTCA ATGCAATCAACTACTTGTGTAAATAA
Upstream 100 bases:
>100_bases ACGAATATCTTCCTGTTCCATTCGAACAGATCAGCGCAAGTAATGGAAATTATACACAGAATTTCGGTTGGTAACTAACC ATCTTAAAACAAAGAATACA
Downstream 100 bases:
>100_bases AAAGAATAAGCAACAATGATGAAAAATATGATCTTACCTATAGCATTTACCGCACTGATAGCTTCGATGACTGCTTGCAG TGACGAGACTGACCCCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLS EGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTF TVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEY ISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSW GGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDL AHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK
Sequences:
>Translated_461_residues MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLS EGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTF TVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEY ISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSW GGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDL AHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK >Mature_461_residues MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLS EGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTF TVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEY ISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSW GGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDL AHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50389; Mature: 50389
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIV CHHHHHHHHHHHHHHHHHHEEECCCHHHHCCCEECCCEEEEEEEEEHHCCCEECCCCEEE VGVPYDYDITRMVVTEMNLSEGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDE EECCCCCCCEEEEEEECCCCCCCEEEEEECCEEEEECEEEEEEECCCEEEEEEEEEEECC AKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTFTVTDGATVTPASGSIQDFTN CEEEEEEECCCEECCHHHHCCEEEEEEEEEEEEEECCEEEEEECCCEECCCCCCHHHCCC PVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEY CEEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCHHHH ISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYA CCHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHEEEEEEECCCCEEEEEEE TFYIANLGIAKDERVPNNSWGGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTV EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCEE YTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDLAHGGDGAVVIAEFEPRSNSG EEECCCEEEECCCEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCC RTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK CEEEEECCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIV CHHHHHHHHHHHHHHHHHHEEECCCHHHHCCCEECCCEEEEEEEEEHHCCCEECCCCEEE VGVPYDYDITRMVVTEMNLSEGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDE EECCCCCCCEEEEEEECCCCCCCEEEEEECCEEEEECEEEEEEECCCEEEEEEEEEEECC AKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTFTVTDGATVTPASGSIQDFTN CEEEEEEECCCEECCHHHHCCEEEEEEEEEEEEEECCEEEEEECCCEECCCCCCHHHCCC PVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEY CEEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCHHHH ISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYA CCHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHEEEEEEECCCCEEEEEEE TFYIANLGIAKDERVPNNSWGGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTV EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCEE YTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDLAHGGDGAVVIAEFEPRSNSG EEECCCEEEECCCEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCC RTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK CEEEEECCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA