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The map label for this gene is yrbI [C]

Identifier: 29347123

GI number: 29347123

Start: 2109884

End: 2110378

Strand: Reverse

Name: yrbI [C]

Synonym: BT_1713

Alternate gene names: 29347123

Gene position: 2110378-2109884 (Counterclockwise)

Preceding gene: 29347124

Following gene: 29347122

Centisome position: 33.71

GC content: 34.34

Gene sequence:

>495_bases
ATGAAAGAGATAAAGCTTATACTTACAGATATTGATGGCGTTTGGACTGATGGCGGAATGTTTTATGATCAAACAGGTAA
TGAATGGAAAAAATTCAATACATCTGATAGTGCTGGTATTTTTTGGGCACATAATAAAGGTATTCCTGTGGGTATTTTAA
CAGGTGAAAAAACTGAGATAGTGCGACGAAGAGCAGAGAAGTTAAAAGTTGATTATTTATTTCAAGGAGTAGTGGATAAA
TTGTCTGCTGCAGAAGAATTATGCAATGAATTAGGGATTAATTTGGAGCAGGTGGCCTATATAGGGGATGATTTGAACGA
TGCTAAATTACTTAAGCGTGTAGGTATAGCTGGAGTACCTGCAAGTGCTCCATTTTATATTCGTAGATTGTCTACTATAT
TCTTAGAAAAAAGAGGTGGTGAAGGTGTTTTTAGAGAATTTGTTGAAAAAGTTCTTGGTATAAATTTGGAAGATTTTATT
GCTGTGATTCAATAG

Upstream 100 bases:

>100_bases
TTGAATAGATATATTCCTACTGCAACTTGTATTACGGTATAGAGTACTGCCTGCTATAAGCTAAGTAGTGATTAATAAAT
AAGGGTAAAATACTAAAAAA

Downstream 100 bases:

>100_bases
TTGTTGTAAAAGATGAAAAAGGTAGATATAATTCATGGTGGATGGCTTAAGGCTCCTAATGGGGCTAGTTCTGTTCTTAG
GACTTTAGCTGAATCTACTT

Product: putative acylneuraminate cytidylyltransferase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDK
LSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVLGINLEDFI
AVIQ

Sequences:

>Translated_164_residues
MKEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDK
LSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVLGINLEDFI
AVIQ
>Mature_164_residues
MKEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDK
LSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVLGINLEDFI
AVIQ

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=153, Percent_Identity=31.3725490196078, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI2367202, Length=152, Percent_Identity=37.5, Blast_Score=97, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 18340; Mature: 18340

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEI
CCCEEEEEECCCCEECCCCEEECCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHH
VRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHECCCCCCHHHHHHHHCCCCCC
ASAPFYIRRLSTIFLEKRGGEGVFREFVEKVLGINLEDFIAVIQ
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEI
CCCEEEEEECCCCEECCCCEEECCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHH
VRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHECCCCCCHHHHHHHHCCCCCC
ASAPFYIRRLSTIFLEKRGGEGVFREFVEKVLGINLEDFIAVIQ
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 12639950; 11835514 [H]