| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347121
Identifier: 29347121
GI number: 29347121
Start: 2107671
End: 2108696
Strand: Reverse
Name: 29347121
Synonym: BT_1711
Alternate gene names: NA
Gene position: 2108696-2107671 (Counterclockwise)
Preceding gene: 29347122
Following gene: 29347120
Centisome position: 33.68
GC content: 28.85
Gene sequence:
>1026_bases ATGAAATATGTCTTTTGGATACATAGTAGTACTTCGTATTATATGGCAAAAGCTATTATAGCAAAAGAAAATTTAGATTG CCATAATGTTGTTTATTTGATTGATCGGAACTATGCTAATAAATATCATAATAATATTGATATAGAAATTGAAGATATTT CATTTTGGATGAATAAGTTTTATCCGATGAAAATTAAAACTATATTAAATTTGAGGAGGATTATTAAAAGTTTTGATTGC TATATATCCTGCTTGATTGCTGATAGTTTTACTGTATATATTCCCCAATTAACTACTCCTATATTTCAATTACTCATCAC ACATCATTCATGTGTAGGATATCATTTTATGGAGGAGGGCCTTGCTTATTATAAAGACCAACTTTACAAGGCATCTCCTA ATAAATTTCCGTTACTAGTAGAATTATTATTTAAGGTATATAATATTTTTTGTCGTCGTGTACAATTAAATTATCCGTTT TTGAAACCTTATAAAAAGAGTCGGTTTCAACCTAAATATTATTTACTTAATAATAAATATAATGTATTAAGGGAGAATGT TTCTTTGGTTTCTTGGATTAAGGAAGAGACTTTTTTCACATCTATTCCTTCAGGTGCTTCTGTTTTGGTTTTAAGTCCAA TTGTAGAATATCGTTTGGCAACTCCTGAGAAATTCTATGCAAGCATGAATCTGTTGTTTAATTATATTTCGGATTCGCAT GTGTTTATTAAAGCACATCCTTATCAGGCTTCTAGTGTTGTGAATACTTTGGTTGGTCTGTTAGAACAACATGGAAAAAC TTGGACTCTTATTCCAAATGATGAACCTTTTGAACAGATCCTTTTATCTGTTGAGAATCTTTGTGTGTTTGGGACAGAGT CTAGTTTGATGTTTTATGCGACACTGCTTGGTAATAACAATAAGATTATTTCCAATCGTAATAATTTGGCTTTTAATGAT ATTATTTTTAGAAAATATGCTCAAAATAGTGAGTCCTTAGTTGTAAATAGTTATATTCAAATTTAA
Upstream 100 bases:
>100_bases ATAATTGGAGTGCAATGGGTAAACTCTCTTATGAACTATATCAACAGAAATTTACGCTTGATTCAATGATTGAATCTTAT GCTAATATTTTGAACGCTAT
Downstream 100 bases:
>100_bases AGATGTTGATTTATTGGGTTGTTTTCTTTATTCTTTTTCTTTTTAGTTATGTAGAACTTATTTCCGCTAGACAGTCCTTG GTATTATTAAGATGCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKYVFWIHSSTSYYMAKAIIAKENLDCHNVVYLIDRNYANKYHNNIDIEIEDISFWMNKFYPMKIKTILNLRRIIKSFDC YISCLIADSFTVYIPQLTTPIFQLLITHHSCVGYHFMEEGLAYYKDQLYKASPNKFPLLVELLFKVYNIFCRRVQLNYPF LKPYKKSRFQPKYYLLNNKYNVLRENVSLVSWIKEETFFTSIPSGASVLVLSPIVEYRLATPEKFYASMNLLFNYISDSH VFIKAHPYQASSVVNTLVGLLEQHGKTWTLIPNDEPFEQILLSVENLCVFGTESSLMFYATLLGNNNKIISNRNNLAFND IIFRKYAQNSESLVVNSYIQI
Sequences:
>Translated_341_residues MKYVFWIHSSTSYYMAKAIIAKENLDCHNVVYLIDRNYANKYHNNIDIEIEDISFWMNKFYPMKIKTILNLRRIIKSFDC YISCLIADSFTVYIPQLTTPIFQLLITHHSCVGYHFMEEGLAYYKDQLYKASPNKFPLLVELLFKVYNIFCRRVQLNYPF LKPYKKSRFQPKYYLLNNKYNVLRENVSLVSWIKEETFFTSIPSGASVLVLSPIVEYRLATPEKFYASMNLLFNYISDSH VFIKAHPYQASSVVNTLVGLLEQHGKTWTLIPNDEPFEQILLSVENLCVFGTESSLMFYATLLGNNNKIISNRNNLAFND IIFRKYAQNSESLVVNSYIQI >Mature_341_residues MKYVFWIHSSTSYYMAKAIIAKENLDCHNVVYLIDRNYANKYHNNIDIEIEDISFWMNKFYPMKIKTILNLRRIIKSFDC YISCLIADSFTVYIPQLTTPIFQLLITHHSCVGYHFMEEGLAYYKDQLYKASPNKFPLLVELLFKVYNIFCRRVQLNYPF LKPYKKSRFQPKYYLLNNKYNVLRENVSLVSWIKEETFFTSIPSGASVLVLSPIVEYRLATPEKFYASMNLLFNYISDSH VFIKAHPYQASSVVNTLVGLLEQHGKTWTLIPNDEPFEQILLSVENLCVFGTESSLMFYATLLGNNNKIISNRNNLAFND IIFRKYAQNSESLVVNSYIQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40016; Mature: 40016
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVFWIHSSTSYYMAKAIIAKENLDCHNVVYLIDRNYANKYHNNIDIEIEDISFWMNKF CEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCEEEEEHHHHHHHCC YPMKIKTILNLRRIIKSFDCYISCLIADSFTVYIPQLTTPIFQLLITHHSCVGYHFMEEG CCHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH LAYYKDQLYKASPNKFPLLVELLFKVYNIFCRRVQLNYPFLKPYKKSRFQPKYYLLNNKY HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCH NVLRENVSLVSWIKEETFFTSIPSGASVLVLSPIVEYRLATPEKFYASMNLLFNYISDSH HHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCE VFIKAHPYQASSVVNTLVGLLEQHGKTWTLIPNDEPFEQILLSVENLCVFGTESSLMFYA EEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHEEEECCCCCEEEEE TLLGNNNKIISNRNNLAFNDIIFRKYAQNSESLVVNSYIQI EEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MKYVFWIHSSTSYYMAKAIIAKENLDCHNVVYLIDRNYANKYHNNIDIEIEDISFWMNKF CEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCEEEEEHHHHHHHCC YPMKIKTILNLRRIIKSFDCYISCLIADSFTVYIPQLTTPIFQLLITHHSCVGYHFMEEG CCHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH LAYYKDQLYKASPNKFPLLVELLFKVYNIFCRRVQLNYPFLKPYKKSRFQPKYYLLNNKY HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCH NVLRENVSLVSWIKEETFFTSIPSGASVLVLSPIVEYRLATPEKFYASMNLLFNYISDSH HHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCE VFIKAHPYQASSVVNTLVGLLEQHGKTWTLIPNDEPFEQILLSVENLCVFGTESSLMFYA EEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHEEEECCCCCEEEEE TLLGNNNKIISNRNNLAFNDIIFRKYAQNSESLVVNSYIQI EEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA