| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347120
Identifier: 29347120
GI number: 29347120
Start: 2106556
End: 2107668
Strand: Reverse
Name: 29347120
Synonym: BT_1710
Alternate gene names: NA
Gene position: 2107668-2106556 (Counterclockwise)
Preceding gene: 29347121
Following gene: 29347119
Centisome position: 33.67
GC content: 30.01
Gene sequence:
>1113_bases ATGTTGATTTATTGGGTTGTTTTCTTTATTCTTTTTCTTTTTAGTTATGTAGAACTTATTTCCGCTAGACAGTCCTTGGT ATTATTAAGATGCGTGATTCTATTTATAGCATGTATGGTGGGATTTCGTTATAATATAGGGGCTGATTGGGAGACATATG TAATTATTTACAACAGGCAGATTCCGTCGCTTCTAGATCCAGAATATAGAATTCTCATGGAACCTCTTTTTTGGATTTTA GGGAGTTTATGTAAAACTCTAGGTTTAAGTTATGCGTGTTTTTTTATAATATTGTCATTGATATCGTTTGTCGTATTATT TATAGTTATTAGACGAATTGGATGTGGATATATTTATTTGCCAATTCTTTTATATTTTTGTTTGTTTTTCTGTCAGTTCC AGCTAAATATAGTTCGCCACGGGATTATGGCTTCATTTGTGTGGCTAGCTTTTTCATATATAAAGGAATGTTCTTTGAAG AAGTTTGTTTTTTTTCTTTTGATAGCTGCAGGCTTTCAACTTGCTGCGTTGGCCTTTTTCCCATTTTATTTCTTGTTGAA TAGATGTTATATGCAGAAGAGTGTTGTTACTCTTATTTTTATATCATTGATTTTTGTAATGTTGGGAGTATCACAAAAAA TACTGTTATTGGGTACTAAAATACCTGTTTTTGGGGAATTTGTAAACTATTATATTCTAGATTTTTATGGACGGAATGTT GATGCTTCTTATGGTTTTTCTGTAGGGATGATTGTTAATTTGTTCCTTTTTTTGTTTCTTTATTTTGGAATGCGTTCCGT CTATAATGATATATCTAATCATTTGAAGATTTTTGTAAACTTATTACTTTATAGTTTTATATTGAGTTGTTTTTTTAATG CATATGCGGTTTTTGTAGAACGGTTAGTGAGCGTTACTAATATGACTTTACTATTTATATTACCTTACGTTTTGCATAAA ATCTTTATTGGAAAAGTTAATAAAACAATAGCATTTGCTTGCATTGTTGTATATGCGATGTTGATGTTTACTAAGACGCT TTATACACCAGTTCCGTTAGGTGGAAAGTATGAATATCAGTTTATTCCTTACCAGTATTCATTTGTTATTTAA
Upstream 100 bases:
>100_bases TTTCCAATCGTAATAATTTGGCTTTTAATGATATTATTTTTAGAAAATATGCTCAAAATAGTGAGTCCTTAGTTGTAAAT AGTTATATTCAAATTTAAAG
Downstream 100 bases:
>100_bases GGGATTATAACGTTTGGTAGATGAGTGTAATTCAATTTGTCTTTTCTGTGATCTAATTGGATGTTCTGAGAGTAATATAT CCTAATTTTATCAATATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQIPSLLDPEYRILMEPLFWIL GSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYLPILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLK KFVFFLLIAAGFQLAALAFFPFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVERLVSVTNMTLLFILPYVLHK IFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQFIPYQYSFVI
Sequences:
>Translated_370_residues MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQIPSLLDPEYRILMEPLFWIL GSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYLPILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLK KFVFFLLIAAGFQLAALAFFPFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVERLVSVTNMTLLFILPYVLHK IFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQFIPYQYSFVI >Mature_370_residues MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQIPSLLDPEYRILMEPLFWIL GSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYLPILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLK KFVFFLLIAAGFQLAALAFFPFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVERLVSVTNMTLLFILPYVLHK IFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQFIPYQYSFVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43244; Mature: 43244
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC IPSLLDPEYRILMEPLFWILGSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH PILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLKKFVFFLLIAAGFQLAALAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCC DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLVSVTNMTLLFILPYVLHKIFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FIPYQYSFVI EECEEEEEEC >Mature Secondary Structure MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC IPSLLDPEYRILMEPLFWILGSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH PILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLKKFVFFLLIAAGFQLAALAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCC DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLVSVTNMTLLFILPYVLHKIFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FIPYQYSFVI EECEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA