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The map label for this gene is tuaB [H]

Identifier: 29347062

GI number: 29347062

Start: 2042019

End: 2043461

Strand: Reverse

Name: tuaB [H]

Synonym: BT_1652

Alternate gene names: 29347062

Gene position: 2043461-2042019 (Counterclockwise)

Preceding gene: 29347063

Following gene: 29347061

Centisome position: 32.64

GC content: 34.3

Gene sequence:

>1443_bases
ATGTCGTCTTCTCTTATAAATAAAGCCACAAAGGGCGTTTTTTGGAGTGCAATTGAACGTTTCTCAGTTCAAGGTATTCA
GTTTGTACTAAGTATTATTATTGCTCGCTTGCTATTACCATCAGATTACGGACTCATAGCTATGTTGAGTATATTTCTTG
CTGTAGCGCAGAGTTTTATTGATAGTGGTTTTTCAAATGCGTTGATACAGAAGCAGAACCGTACAGAGATTGATTATTCT
ACTGTATTCTATTTTAATATAGGCATCGGTCTTTTCTTCTACCTTGTATTTTACATTTCTTCTCCTTATATTGCTCTTTT
TTATTCAGAGCCTCAGTTATGTTTGATTACAAAAATAGTAGGGTTGAATGTAGTGATAAATTCTTTTGGGGTAGTGCAAA
GGGCAAAGTTCTCAATCGCCTTAAATTTTAGGTTGCAAGCTGTTGCTTCATTAACGGCAGTAATTTTAAGTGGAGTCTTA
GGGGTCAGTTTAGCATATTATGGGTATGGCGCTTGGTCCTTGGTGATGCAAAGTTTGTTGAATAATTTTTTTAATGTATT
GTTGCTTTGGTTATTATCTAAATGGTATCCTCTATGGTGTTTCTCATGGAATAGTTTCAAATCTCTTTTTTCATTTGGAA
GTAAGTTATTAGTGTCGGGTCTTCTACATACTTTGTATACGAATCTTTATTCTTTGGCAATTGGGAAGAAAATGACTTCT
GGGGATCTTGGTTTGTATAATAGGGCATCTACTTTGGCGGCTTTTCCGGCAGGAAATATTACAGATGTGATGTATAAAGC
TATGTTCCCTGTTCTTTGCACTATACAAGATAGTGATGAAGAGTTGGAGGTCTATTTTCTGAGGTATATTCGTTCAGCAT
GTTATGTCGTTTTCCCTTTGATGATTGGTTTGGCTGTGTTAGCTGATCCTTTTGTTAAAGTTGTTTTGACAGACAGATGG
TCAGGGATAGTTCCAATACTACAAATTTTGTCTTTTGCATATATGTGGGATCCTGTAATGCGCATTAATAATCACTTTTT
ATATGCTAAAGGTAGAACGGACTATACGCTGAAGGCAGAAGTCTTTAAAAAGATAATTGCTTTTTCGATTCTTCTGTTGA
CTATTCCTTTTGGGCTGTATGTTATAGCTTGGGGAGTCGTTATTTATTCATTTATAGATATATTTGTAATTACAAGATAT
ACTTGTATAATTTCTAATGTAACATTGACCAGTGAGATAAAGAAATTATTTCCAGTATTATTGTTAGCTTTAAGTATGGG
AGCGTGTGTATGGTTATCAACCTATTTCGTTATTTCTTCTGTGTTAAAACTTCTCTCAGGCGTTCTTATTGGTGTGGTCT
ATTATTTGGTAGTTTCCAAGATATTCAAGTTTGAGGAGATGTGTTTTTTGCAAAATATGATTGTGAGATTGAAAAATAAG
TAA

Upstream 100 bases:

>100_bases
ATAAGCTGGATATTGATGGGGAGGAATATATTTAACTGTTTGAGGAAAAATAAAATTTGAGTTTTCTCATGAAGTTATTT
TAATATACAATAGAATAAAA

Downstream 100 bases:

>100_bases
TATTTTATAATGAGAAATATAGCAGTAATTCTAGCCGGTGGTTCCGGACAACGATTGGGTGAGAATATACCTAAACAGTT
TTTAAAAATAGCAGGTAAAA

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MSSSLINKATKGVFWSAIERFSVQGIQFVLSIIIARLLLPSDYGLIAMLSIFLAVAQSFIDSGFSNALIQKQNRTEIDYS
TVFYFNIGIGLFFYLVFYISSPYIALFYSEPQLCLITKIVGLNVVINSFGVVQRAKFSIALNFRLQAVASLTAVILSGVL
GVSLAYYGYGAWSLVMQSLLNNFFNVLLLWLLSKWYPLWCFSWNSFKSLFSFGSKLLVSGLLHTLYTNLYSLAIGKKMTS
GDLGLYNRASTLAAFPAGNITDVMYKAMFPVLCTIQDSDEELEVYFLRYIRSACYVVFPLMIGLAVLADPFVKVVLTDRW
SGIVPILQILSFAYMWDPVMRINNHFLYAKGRTDYTLKAEVFKKIIAFSILLLTIPFGLYVIAWGVVIYSFIDIFVITRY
TCIISNVTLTSEIKKLFPVLLLALSMGACVWLSTYFVISSVLKLLSGVLIGVVYYLVVSKIFKFEEMCFLQNMIVRLKNK

Sequences:

>Translated_480_residues
MSSSLINKATKGVFWSAIERFSVQGIQFVLSIIIARLLLPSDYGLIAMLSIFLAVAQSFIDSGFSNALIQKQNRTEIDYS
TVFYFNIGIGLFFYLVFYISSPYIALFYSEPQLCLITKIVGLNVVINSFGVVQRAKFSIALNFRLQAVASLTAVILSGVL
GVSLAYYGYGAWSLVMQSLLNNFFNVLLLWLLSKWYPLWCFSWNSFKSLFSFGSKLLVSGLLHTLYTNLYSLAIGKKMTS
GDLGLYNRASTLAAFPAGNITDVMYKAMFPVLCTIQDSDEELEVYFLRYIRSACYVVFPLMIGLAVLADPFVKVVLTDRW
SGIVPILQILSFAYMWDPVMRINNHFLYAKGRTDYTLKAEVFKKIIAFSILLLTIPFGLYVIAWGVVIYSFIDIFVITRY
TCIISNVTLTSEIKKLFPVLLLALSMGACVWLSTYFVISSVLKLLSGVLIGVVYYLVVSKIFKFEEMCFLQNMIVRLKNK
>Mature_479_residues
SSSLINKATKGVFWSAIERFSVQGIQFVLSIIIARLLLPSDYGLIAMLSIFLAVAQSFIDSGFSNALIQKQNRTEIDYST
VFYFNIGIGLFFYLVFYISSPYIALFYSEPQLCLITKIVGLNVVINSFGVVQRAKFSIALNFRLQAVASLTAVILSGVLG
VSLAYYGYGAWSLVMQSLLNNFFNVLLLWLLSKWYPLWCFSWNSFKSLFSFGSKLLVSGLLHTLYTNLYSLAIGKKMTSG
DLGLYNRASTLAAFPAGNITDVMYKAMFPVLCTIQDSDEELEVYFLRYIRSACYVVFPLMIGLAVLADPFVKVVLTDRWS
GIVPILQILSFAYMWDPVMRINNHFLYAKGRTDYTLKAEVFKKIIAFSILLLTIPFGLYVIAWGVVIYSFIDIFVITRYT
CIISNVTLTSEIKKLFPVLLLALSMGACVWLSTYFVISSVLKLLSGVLIGVVYYLVVSKIFKFEEMCFLQNMIVRLKNK

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=366, Percent_Identity=27.3224043715847, Blast_Score=150, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54160; Mature: 54029

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLINKATKGVFWSAIERFSVQGIQFVLSIIIARLLLPSDYGLIAMLSIFLAVAQSFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
DSGFSNALIQKQNRTEIDYSTVFYFNIGIGLFFYLVFYISSPYIALFYSEPQLCLITKIV
HCCCHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
GLNVVINSFGVVQRAKFSIALNFRLQAVASLTAVILSGVLGVSLAYYGYGAWSLVMQSLL
HHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NNFFNVLLLWLLSKWYPLWCFSWNSFKSLFSFGSKLLVSGLLHTLYTNLYSLAIGKKMTS
HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GDLGLYNRASTLAAFPAGNITDVMYKAMFPVLCTIQDSDEELEVYFLRYIRSACYVVFPL
CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH
MIGLAVLADPFVKVVLTDRWSGIVPILQILSFAYMWDPVMRINNHFLYAKGRTDYTLKAE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHH
VFKKIIAFSILLLTIPFGLYVIAWGVVIYSFIDIFVITRYTCIISNVTLTSEIKKLFPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLALSMGACVWLSTYFVISSVLKLLSGVLIGVVYYLVVSKIFKFEEMCFLQNMIVRLKNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSLINKATKGVFWSAIERFSVQGIQFVLSIIIARLLLPSDYGLIAMLSIFLAVAQSFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
DSGFSNALIQKQNRTEIDYSTVFYFNIGIGLFFYLVFYISSPYIALFYSEPQLCLITKIV
HCCCHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
GLNVVINSFGVVQRAKFSIALNFRLQAVASLTAVILSGVLGVSLAYYGYGAWSLVMQSLL
HHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NNFFNVLLLWLLSKWYPLWCFSWNSFKSLFSFGSKLLVSGLLHTLYTNLYSLAIGKKMTS
HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GDLGLYNRASTLAAFPAGNITDVMYKAMFPVLCTIQDSDEELEVYFLRYIRSACYVVFPL
CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH
MIGLAVLADPFVKVVLTDRWSGIVPILQILSFAYMWDPVMRINNHFLYAKGRTDYTLKAE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHH
VFKKIIAFSILLLTIPFGLYVIAWGVVIYSFIDIFVITRYTCIISNVTLTSEIKKLFPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLALSMGACVWLSTYFVISSVLKLLSGVLIGVVYYLVVSKIFKFEEMCFLQNMIVRLKNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]